contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 554695 | 554695 | PRJNA565584_P_NODE_126601_length_277_cov_2.764706_g125449_i0 | PRJNA565584 | 126601 | 277 | 2.764706 | 7.65823562 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 259 | 1.4e-64 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g125449 | i0 | 84.701 | 0.967509025270758 | 268 | 31 | 96 | 5 | 4 | 268 | 2648010 | 2648270 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 268 | 259 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 1133929 | 1133929 | PRJNA565584_P_NODE_129661_length_275_cov_3.029703_g128509_i0 | PRJNA565584 | 129661 | 275 | 3.029703 | 8.33168325 | Bacteriovorax | 146784 | Bacteria | Bacteria | 449 | 7.670000000000001e-122 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g128509 | i0 | 96.337 | 232.447272727273 | 273 | 10 | 99 | 0 | 3 | 275 | 1660726 | 1660454 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 63923 | 449 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 2410377 | 2410377 | PRJNA565584_P_NODE_39182_length_480_cov_1.113022_g38031_i0 | PRJNA565584 | 39182 | 480 | 1.113022 | 5.3425056 | Peredibacter | 263370 | Bacteria | Bacteria | 765 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g38031 | i0 | 95.417 | 162.0125 | 480 | 22 | 100 | 0 | 1 | 480 | 511695 | 511216 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 77766 | 771 | 0.992217898832685 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 3685206 | 3685206 | PRJNA565584_P_NODE_120383_length_281_cov_2.307692_g119231_i0 | PRJNA565584 | 120383 | 281 | 2.307692 | 6.48461452 | Bdellovibrio | 958 | Bacteria | Bacteria | 257 | 5.11e-64 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g119231 | i0 | 87.665 | 232.701067615658 | 227 | 20 | 79 | 6 | 2 | 224 | 2950116 | 2950338 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 65389 | 257 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 3685393 | 3685393 | PRJNA565584_P_NODE_137863_length_270_cov_1.563452_g136711_i0 | PRJNA565584 | 137863 | 270 | 1.563452 | 4.2213204 | Bdellovibrio | 958 | Bacteria | Bacteria | 237 | 6.37e-58 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g136711 | i0 | 85.043 | 2.50740740740741 | 234 | 33 | 86 | 2 | 5 | 237 | 591999 | 591767 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 677 | 237 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 5661679 | 5661679 | PRJNA565584_P_NODE_92885_length_310_cov_2.497890_g91733_i0 | PRJNA565584 | 92885 | 310 | 2.49789 | 7.743459 | Bdellovibrio sp. HCB-162 | 3394234 | Bacteria | Bacteria | 152 | 2.7799999999999996e-32 | NTclustered | gi|2898207634|gb|CP178861.1| | 3394234 | g91733 | i0 | 86.429 | 4.39354838709677 | 140 | 17 | 45 | 2 | 169 | 307 | 2312022 | 2312160 | Bdellovibrio sp. HCB-162 chromosome, complete genome | blastn | 1362 | 152 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB-162 | ||
| 7512208 | 7512208 | PRJNA565584_P_NODE_173586_length_250_cov_0.870056_g172434_i0 | PRJNA565584 | 173586 | 250 | 0.870056 | 2.17514 | Bdellovibrio | 958 | Bacteria | Bacteria | 202 | 2.12e-47 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g172434 | i0 | 83.645 | 8.044 | 214 | 35 | 86 | 0 | 1 | 214 | 2186416 | 2186629 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 2011 | 204 | 0.990196078431373 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 9484420 | 9484420 | PRJNA565584_P_NODE_198248_length_244_cov_2.181287_g197096_i0 | PRJNA565584 | 198248 | 244 | 2.181287 | 5.32234028 | Bdellovibrio sp. 22V | 3044166 | Bacteria | Bacteria | 172 | 1.62e-38 | NTclustered | gi|2514198184|gb|CP125854.1| | 3044166 | g197096 | i0 | 84.181 | 18.7049180327869 | 177 | 28 | 73 | 0 | 1 | 177 | 3354235 | 3354059 | Bdellovibrio sp. 22V chromosome, complete genome | blastn | 4564 | 172 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. 22V | ||
| 14584460 | 14584460 | PRJNA565584_P_NODE_171192_length_250_cov_1.728814_g170040_i0 | PRJNA565584 | 171192 | 250 | 1.728814 | 4.322035 | Bacteriovorax sp. HI3 | 2984118 | Bacteria | Bacteria | 294 | 3.41e-75 | NTclustered | gi|2321225508|dbj|AP026946.1| | 2984118 | g170040 | i0 | 88.889 | 1.476 | 243 | 22 | 95 | 3 | 9 | 246 | 95534 | 95776 | Bacteriovorax sp. HI3 DNA, complete genome | blastn | 369 | 294 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. HI3 | ||
| 15163681 | 15163681 | PRJNA565584_P_NODE_85812_length_321_cov_1.008065_g84660_i0 | PRJNA565584 | 85812 | 321 | 1.008065 | 3.23588865 | Bdellovibrio | 958 | Bacteria | Bacteria | 237 | 7.750000000000001e-58 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g84660 | i0 | 82.657 | 6.07476635514019 | 271 | 43 | 84 | 4 | 1 | 269 | 236433 | 236701 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 1950 | 237 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 15858757 | 15858757 | PRJNA565584_P_NODE_200513_length_244_cov_0.900585_g199361_i0 | PRJNA565584 | 200513 | 244 | 0.900585 | 2.1974274 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 158 | 4.53e-34 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g199361 | i0 | 81.579 | 18.094262295082 | 190 | 35 | 78 | 0 | 11 | 200 | 4186394 | 4186583 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 4415 | 158 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 16436328 | 16436328 | PRJNA565584_P_NODE_104453_length_292_cov_2.100457_g103301_i0 | PRJNA565584 | 104453 | 292 | 2.100457 | 6.13333444 | Pigmentibacter | 2838409 | Bacteria | Bacteria | 255 | 1.92e-63 | NTclustered | gi|2651759839|dbj|AP029159.1| | 2683196 | g103301 | i0 | 82.712 | 195.27397260274 | 295 | 44 | 99 | 6 | 1 | 291 | 507192 | 507483 | Pigmentibacter ruber GTC16762 DNA, complete genome | blastn | 57020 | 255 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Pigmentibacter | Pigmentibacter ruber | ||
| 18406431 | 18406431 | PRJNA565584_P_NODE_109455_length_288_cov_2.051163_g108303_i0 | PRJNA565584 | 109455 | 288 | 2.051163 | 5.90734944 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 75 | 5.69e-9 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g108303 | i0 | 78.814 | 6.40972222222222 | 118 | 19 | 40 | 4 | 2 | 116 | 1460545 | 1460431 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 1846 | 75 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 18408148 | 18408148 | PRJNA565584_P_NODE_205775_length_243_cov_0.905882_g204623_i0 | PRJNA565584 | 205775 | 243 | 0.905882 | 2.20129326 | Bdellovibrio sp. HAGR004 | 3113895 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2663432256|dbj|AP029176.1| | 3113895 | g204623 | i0 | 100 | 1 | 243 | 0 | 100 | 0 | 1 | 243 | 2541558 | 2541800 | Bdellovibrio sp. HAGR004 DNA, complete genome | blastn | 243 | 449 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HAGR004 | ||
| 24780796 | 24780796 | PRJNA565584_P_NODE_117300_length_283_cov_2.133333_g116148_i0 | PRJNA565584 | 117300 | 283 | 2.133333 | 6.03733239 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 296 | 1.09e-75 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g116148 | i0 | 86.496 | 68.3003533568905 | 274 | 31 | 96 | 6 | 11 | 283 | 861457 | 861189 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 19329 | 296 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;