RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 5 ✖

bioproject 1

  • PRJNA565584 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10760515 10760515 PRJNA565584_P_NODE_207069_length_242_cov_3.242604_g205917_i0 PRJNA565584 207069 242 3.242604 7.84710168 Halalkalicoccus jeotgali 413810 Archaea Archaea 294 3.28e-75   NTclustered gi|299123054|gb|CP002062.1| 795797 g205917 i0 88.75 0.991735537190083 240 27 99 0 1 240 1108912 1108673 Halalkalicoccus jeotgali B3, complete genome blastn 240 294 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
13310334 13310334 PRJNA565584_P_NODE_215931_length_241_cov_0.916667_g214779_i0 PRJNA565584 215931 241 0.916667 2.20916747 Halalkalicoccus salilacus 3117459 Archaea Archaea 60.2 1.3e-4   NTclustered gi|2674869203|gb|CP144461.1| 3117459 g214779 i0 85.965 0.236514522821577 57 6 23 2 168 223 100521 100466 Halalkalicoccus salilacus strain FCH27 chromosome, complete genome blastn 57 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
17135559 17135559 PRJNA565584_P_NODE_92794_length_310_cov_2.569620_g91642_i0 PRJNA565584 92794 310 2.56962 7.965822 Halorubrum salinarum 2739057 Archaea Archaea 195 4.5499999999999995e-45   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g91642 i0 90 46.3677419354839 150 15 48 0 1 150 991953 992102 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 14374 195 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum
18406346 18406346 PRJNA565584_P_NODE_104935_length_292_cov_1.347032_g103783_i0 PRJNA565584 104935 292 1.347032 3.93333344 Methanosarcina siciliae 38027 Archaea Archaea 75 5.78e-9   NTclustered gi|805350375|gb|CP009507.1| 1434119 g103783 i0 95.652 0.407534246575342 46 2 16 0 68 113 773124 773079 Methanosarcina siciliae HI350, complete genome blastn 119 75 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina siciliae
19682754 19682754 PRJNA565584_P_NODE_215336_length_241_cov_0.916667_g214184_i0 PRJNA565584 215336 241 0.916667 2.20916747 Halorubrum salinarum 2739057 Archaea Archaea 58.4 4.66e-4   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g214184 i0 97.059 0.141078838174274 34 1 14 0 134 167 2894212 2894245 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 34 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;