RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJNA565584 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12614534 12614534 PRJNA565584_P_NODE_85750_length_321_cov_1.241935_g84598_i0 PRJNA565584 85750 321 1.241935 3.98661135 Archaea 2157 Archaea Archaea 69.4 2.99e-7   NTclustered gi|2874253858|emb|OY969914.1| 176233 g84598 i0 84.722 47.1028037383178 72 7 22 4 219 288 2030610 2030679 MAG: uncultured Methanobacteriaceae archaeon isolate MFD02416.bin.1.248 genome assembly, chromosome: 1 blastn 15120 69.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
20957652 20957652 PRJNA565584_P_NODE_163897_length_253_cov_1.505556_g162745_i0 PRJNA565584 163897 253 1.505556 3.80905668 Methanocaldococcus infernus 67760 Archaea Archaea 52.8 0.023   NTclustered gi|295433502|gb|CP002009.1| 573063 g162745 i0 100 0.110671936758893 28 0 11 0 75 102 977082 977109 Methanocaldococcus infernus ME, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus infernus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;