RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA564810" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA564810 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1829654 1829654 PRJNA564810_S_NODE_4702_length_259_cov_1.185567_g4680_i0 PRJNA564810 4702 259 1.185567 3.07061853 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g4680 i0 100 0.22007722007722 29 0 11 0 1 29 1694009 1694037 Anemonia sulcata genome assembly, chromosome: 1 blastn 57 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
15161665 15161665 PRJNA564810_S_NODE_892_length_415_cov_39.700000_g870_i0 PRJNA564810 892 415 39.7 164.755 Ellisella 328399 Cnidaria other_Eukaryota 97.1 1.82e-15   NTclustered gi|2689317297|gb|PP410744.1| 2751895 g870 i0 95.161 14.9542168674699 62 2 24 1 326 387 3528 3588 Ellisella elongata voucher USNM:1660444 large subunit ribosomal RNA gene, partial sequence blastn 6206 97.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Ellisellidae Ellisella Ellisella elongata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;