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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA564810" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA564810 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
554096 554096 PRJNA564810_S_NODE_8761_length_197_cov_6.712121_g8739_i0 PRJNA564810 8761 197 6.712121 13.22287837 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 364 1.929999999999999e-96   NTclustered gi|33309639|gb|AF411276.1| 188950 g8739 i0 100 68.0964467005076 197 0 100 0 1 197 1493 1689 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 13415 364 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13308239 13308239 PRJNA564810_S_NODE_7071_length_222_cov_2.248408_g7049_i0 PRJNA564810 7071 222 2.248408 4.99146576 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 411 2.8199999999999996e-110   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7049 i0 100 25.7297297297297 222 0 100 0 1 222 2171 2392 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 5712 411 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15856861 15856861 PRJNA564810_S_NODE_713_length_446_cov_16.049869_g691_i0 PRJNA564810 713 446 16.049869 71.58241574 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 318 3.85e-82   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g691 i0 82.642 46.0493273542601 386 42 86 17 64 446 4039 3676 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20538 318 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
20260047 20260047 PRJNA564810_S_NODE_996_length_404_cov_16.306785_g974_i0 PRJNA564810 996 404 16.306785 65.8794114 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 747 0   NTclustered gi|33309639|gb|AF411276.1| 188950 g974 i0 100 100.44801980198 404 0 100 0 1 404 1028 625 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 40581 747 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20956287 20956287 PRJNA564810_S_NODE_8097_length_211_cov_2.232877_g8075_i0 PRJNA564810 8097 211 2.232877 4.71137047 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 385 1.61e-102   NTclustered gi|238617602|gb|FJ973377.1| 188950 g8075 i0 99.526 67.9952606635071 211 1 100 0 1 211 2005 1795 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 14347 385 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24780404 24780404 PRJNA564810_S_NODE_4720_length_258_cov_5.455959_g4698_i0 PRJNA564810 4720 258 5.455959 14.07637422 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 460 3.29e-125   NTclustered gi|238617602|gb|FJ973377.1| 188950 g4698 i0 98.837 79.1511627906977 258 3 100 0 1 258 2681 2938 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 20421 460 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24780414 24780414 PRJNA564810_S_NODE_7220_length_221_cov_0.871795_g7198_i0 PRJNA564810 7220 221 0.871795 1.92666695 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 403 4.69e-108   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7198 i0 99.548 25.6968325791855 221 1 100 0 1 221 370 590 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 5679 403 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;