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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA564810" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA564810 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
554096 554096 PRJNA564810_S_NODE_8761_length_197_cov_6.712121_g8739_i0 PRJNA564810 8761 197 6.712121 13.22287837 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 364 1.929999999999999e-96   NTclustered gi|33309639|gb|AF411276.1| 188950 g8739 i0 100 68.0964467005076 197 0 100 0 1 197 1493 1689 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 13415 364 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3105031 3105031 PRJNA564810_S_NODE_1163_length_388_cov_4.969040_g1141_i0 PRJNA564810 1163 388 4.96904 19.2798752 Heterosigma akashiwo 2829 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.037   NTclustered gi|1418352793|dbj|LC384959.1| 2829 g1141 i0 100 1.94845360824742 28 0 7 0 38 65 1435 1408 Heterosigma akashiwo CCMP1595 mitochondrial DNA, complete genome blastn 756 52.8 1 Eukaryota Sar     Raphidophyceae Chattonellales Chattonellaceae Heterosigma Heterosigma akashiwo
3105032 3105032 PRJNA564810_S_NODE_1423_length_367_cov_4.940397_g1401_i0 PRJNA564810 1423 367 4.940397 18.13125699 Crypthecodinium cohnii 2866 SAR_Eukaryotes SAR_Eukaryotes 174 7.13e-39   NTclustered gi|20530310|gb|AF329432.1| 2866 g1401 i0 81.69 33.5340599455041 213 35 57 4 156 366 277 67 Crypthecodinium cohnii translation initiation factor 5A (eIF-5A) gene, partial cds blastn 12307 174 1 Eukaryota Sar     Dinophyceae Gonyaulacales Crypthecodiniaceae Crypthecodinium Crypthecodinium cohnii
4381636 4381636 PRJNA564810_S_NODE_3584_length_282_cov_7.760369_g3562_i0 PRJNA564810 3584 282 7.760369 21.88424058 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|915013601|ref|XM_013396595.1| 5801 g3562 i0 94.444 1.32269503546099 36 2 13 0 12 47 1865 1900 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 373 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
6932227 6932227 PRJNA564810_S_NODE_7026_length_223_cov_0.860759_g7004_i0 PRJNA564810 7026 223 0.860759 1.91949257 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.02   NTclustered gi|2742502725|gb|PP905714.1| 447216 g7004 i0 100 0.251121076233184 28 0 13 0 196 223 1225 1198 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
8207116 8207116 PRJNA564810_S_NODE_2527_length_314_cov_2.875502_g2505_i0 PRJNA564810 2527 314 2.875502 9.02907628 Plasmodium knowlesi 5850 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|221053801|ref|XM_002258239.1| 5851 g2505 i0 96.97 1.82165605095541 33 1 11 0 177 209 1760 1792 Plasmodium knowlesi strain H pre-mRNA-splicing helicase BRR2, putative (PKNH_0514400), partial mRNA blastn 572 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
11336733 11336733 PRJNA564810_S_NODE_3789_length_278_cov_1.521127_g3767_i0 PRJNA564810 3789 278 1.521127 4.22873306 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 183 8.7e-42   NTclustered gi|2530759374|gb|OR085995.1| 35122 g3767 i0 79.545 24.6726618705036 264 48 94 6 13 273 36202 35942 Macrocystis pyrifera isolate 501 mitochondrion, complete genome blastn 6859 183 1 Eukaryota Sar     Phaeophyceae Laminariales Laminariaceae Macrocystis Macrocystis pyrifera
13308239 13308239 PRJNA564810_S_NODE_7071_length_222_cov_2.248408_g7049_i0 PRJNA564810 7071 222 2.248408 4.99146576 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 411 2.8199999999999996e-110   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7049 i0 100 25.7297297297297 222 0 100 0 1 222 2171 2392 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 5712 411 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
15856861 15856861 PRJNA564810_S_NODE_713_length_446_cov_16.049869_g691_i0 PRJNA564810 713 446 16.049869 71.58241574 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 318 3.85e-82   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g691 i0 82.642 46.0493273542601 386 42 86 17 64 446 4039 3676 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20538 318 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
17131867 17131867 PRJNA564810_S_NODE_1334_length_374_cov_2.614887_g1312_i0 PRJNA564810 1334 374 2.614887 9.77967738 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|916505125|ref|XM_013497709.1| 44415 g1312 i0 96.875 0.459893048128342 32 1 9 0 4 35 820 851 Eimeria mitis uncharacterized protein (EMH_0059720), partial mRNA blastn 172 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
17131885 17131885 PRJNA564810_S_NODE_5614_length_243_cov_1.747191_g5592_i0 PRJNA564810 5614 243 1.747191 4.24567413 Hematodinium sp. 173654 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|357196844|emb|HE610736.1| 173654 g5592 i0 100 0.234567901234568 29 0 12 0 215 243 30 2 Hematodinium sp. mitochondrial partial small subunit ribosomal RNA (ssu rRNA gene), clone 16 blastn 57 54.7 1 Eukaryota Sar     Dinophyceae Syndiniales Syndiniaceae Hematodinium Hematodinium sp.
17711474 17711474 PRJNA564810_S_NODE_1794_length_346_cov_4.085409_g1772_i0 PRJNA564810 1794 346 4.085409 14.13551514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 211 5.11e-50   NTclustered gi|937408816|ref|NC_027966.1| 114742 g1772 i0 79.739 94.7109826589595 306 51 87 10 45 344 9797 10097 Pythium insidiosum mitochondrial DNA, complete genome blastn 32770 213 0.990610328638498 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
18406200 18406200 PRJNA564810_S_NODE_455_length_509_cov_2.619369_g434_i0 PRJNA564810 455 509 2.619369 13.33258821 Hyaloperonospora arabidopsidis 272952 SAR_Eukaryotes SAR_Eukaryotes 117 1.7400000000000003e-21   NTclustered gi|2248512796|ref|NC_063789.1| 272952 g434 i0 77.949 59.2848722986248 195 37 38 5 51 243 917 1107 Hyaloperonospora arabidopsidis isolate Noks1 mitochondrion, complete genome blastn 30176 117 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora arabidopsidis
18406206 18406206 PRJNA564810_S_NODE_655_length_457_cov_6.987245_g633_i0 PRJNA564810 655 457 6.987245 31.93170965 Nitzschia sp. IriIs04 1444690 SAR_Eukaryotes SAR_Eukaryotes 143 2.56e-29   NTclustered gi|944186150|dbj|LC052662.1| 1444690 g633 i0 86.26 1.47045951859956 131 18 29 0 14 144 1231 1361 Nitzschia sp. IriIs04 sec61alpha mRNA for Sec61alpha, complete cds blastn 672 143 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia sp. IriIs04
19680665 19680665 PRJNA564810_S_NODE_8436_length_204_cov_2.618705_g8414_i0 PRJNA564810 8436 204 2.618705 5.3421582 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.018   NTclustered gi|915126240|ref|XM_013478817.1| 5804 g8414 i0 100 0.137254901960784 28 0 14 0 1 28 2125 2098 Eimeria maxima cyclic nucleotide-binding domain containing protein, putative partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
20260047 20260047 PRJNA564810_S_NODE_996_length_404_cov_16.306785_g974_i0 PRJNA564810 996 404 16.306785 65.8794114 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 747 0   NTclustered gi|33309639|gb|AF411276.1| 188950 g974 i0 100 100.44801980198 404 0 100 0 1 404 1028 625 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 40581 747 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20956287 20956287 PRJNA564810_S_NODE_8097_length_211_cov_2.232877_g8075_i0 PRJNA564810 8097 211 2.232877 4.71137047 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 385 1.61e-102   NTclustered gi|238617602|gb|FJ973377.1| 188950 g8075 i0 99.526 67.9952606635071 211 1 100 0 1 211 2005 1795 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 14347 385 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20956288 20956288 PRJNA564810_S_NODE_9097_length_186_cov_35.404959_g9075_i0 PRJNA564810 9097 186 35.404959 65.85322374 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.016   NTclustered gi|2742502725|gb|PP905714.1| 447216 g9075 i0 100 0.301075268817204 28 0 15 0 1 28 1198 1225 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
24780404 24780404 PRJNA564810_S_NODE_4720_length_258_cov_5.455959_g4698_i0 PRJNA564810 4720 258 5.455959 14.07637422 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 460 3.29e-125   NTclustered gi|238617602|gb|FJ973377.1| 188950 g4698 i0 98.837 79.1511627906977 258 3 100 0 1 258 2681 2938 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 20421 460 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24780414 24780414 PRJNA564810_S_NODE_7220_length_221_cov_0.871795_g7198_i0 PRJNA564810 7220 221 0.871795 1.92666695 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 403 4.69e-108   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7198 i0 99.548 25.6968325791855 221 1 100 0 1 221 370 590 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 5679 403 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;