RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA564013" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA564013 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8205013 8205013 PRJNA564013_P_NODE_37767_length_628_cov_16.869489_g35088_i0 PRJNA564013 37767 628 16.869489 105.94039092 Entomophthora muscae 34485 Fungi Fungi 374 1.17e-98   NTclustered gi|82398173|gb|DQ273772.1| 34485 g35088 i0 84.675 31.7691082802548 385 48 61 11 220 599 2061 1683 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 19951 374 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
10754455 10754455 PRJNA564013_P_NODE_270529_length_245_cov_5.548913_g267677_i0 PRJNA564013 270529 245 5.548913 13.59483685 Pandora neoaphidis 76017 Fungi Fungi 436 5.229999999999999e-118   NTclustered gi|1390219702|gb|MH366634.1| 76017 g267677 i0 100 84.2857142857143 236 0 96 0 1 236 377 142 Pandora neoaphidis voucher Number 19 large subunit ribosomal RNA gene, partial sequence blastn 20650 436 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis
18404075 18404075 PRJNA564013_P_NODE_37475_length_630_cov_31.655536_g34798_i0 PRJNA564013 37475 630 31.655536 199.4298768 Entomophthora muscae 34485 Fungi Fungi 420 1.4899999999999995e-112   NTclustered gi|82398173|gb|DQ273772.1| 34485 g34798 i0 80.033 39.915873015873 606 89 93 25 11 596 2281 1688 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 25147 420 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;