RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA564013" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13303285 13303285 PRJNA564013_P_NODE_220051_length_287_cov_7.619469_g217200_i0 PRJNA564013 220051 287 7.619469 21.86787603 Adineta vaga complex sp. A JFF-2016 1813164 Rotifera other_Eukaryota 396 1.06e-105   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g217200 i0 94.882 55.8118466898955 254 12 89 1 11 264 2114 1862 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 16018 396 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
21534931 21534931 PRJNA564013_P_NODE_373377_length_174_cov_5.725664_g370525_i0 PRJNA564013 373377 174 5.725664 9.96265536 Adineta 104781 Rotifera other_Eukaryota 274 2.87e-69   NTclustered gi|72153731|gb|DQ089739.1| 104782 g370525 i0 99.338 24.367816091954 151 1 87 0 24 174 1955 2105 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 4240 274 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;