contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA564013" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 549345 | 549345 | PRJNA564013_P_NODE_229801_length_279_cov_1.665138_g226949_i0 | PRJNA564013 | 229801 | 279 | 1.665138 | 4.64573502 | Cystobacter fuscus | 43 | Bacteria | Bacteria | 243 | 1.42e-59 | NTclustered | gi|1243034522|gb|CP022098.1| | 43 | g226949 | i0 | 82.909 | 87.9784946236559 | 275 | 41 | 97 | 6 | 2 | 273 | 10884042 | 10883771 | Cystobacter fuscus strain DSM 52655 chromosome, complete genome | blastn | 24546 | 243 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Cystobacter | Cystobacter fuscus | ||
| 1132961 | 1132961 | PRJNA564013_P_NODE_367801_length_182_cov_8.314050_g364949_i0 | PRJNA564013 | 367801 | 182 | 8.31405 | 15.131571 | Sorangium | 39643 | Bacteria | Bacteria | 156 | 1.15e-33 | NTclustered | gi|507148211|ref|NR_103018.1| | 56 | g364949 | i0 | 84.431 | 27.1648351648352 | 167 | 16 | 88 | 9 | 22 | 182 | 1516 | 1678 | Sorangium cellulosum strain So ce 56 23S ribosomal RNA gene, complete sequence | blastn | 4944 | 156 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 1826948 | 1826948 | PRJNA564013_P_NODE_338322_length_205_cov_0.902778_g335470_i0 | PRJNA564013 | 338322 | 205 | 0.902778 | 1.8506949 | Archangium violaceum | 83451 | Bacteria | Bacteria | 307 | 3.4600000000000006e-79 | NTclustered | gi|1981856374|gb|CP069338.1| | 83451 | g335470 | i0 | 93.659 | 1 | 205 | 13 | 100 | 0 | 1 | 205 | 12545845 | 12546049 | Archangium violaceum strain SDU34 chromosome, complete genome | blastn | 205 | 307 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 1827330 | 1827330 | PRJNA564013_P_NODE_35842_length_643_cov_2.993127_g33179_i0 | PRJNA564013 | 35842 | 643 | 2.993127 | 19.24580661 | Corallococcus macrosporus | 35 | Bacteria | Bacteria | 385 | 5.5499999999999996e-102 | NTclustered | gi|1243045502|gb|CP022203.1| | 1189310 | g33179 | i0 | 81.238 | 42.2846034214619 | 517 | 62 | 76 | 29 | 16 | 505 | 3246222 | 3245714 | Corallococcus macrosporus DSM 14697 chromosome, complete genome | blastn | 27189 | 385 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus macrosporus | ||
| 4374301 | 4374301 | PRJNA564013_P_NODE_12004_length_1017_cov_20.398536_g1035_i2 | PRJNA564013 | 12004 | 1017 | 20.398536 | 207.45311112 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 315 | 1.19e-80 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g1035 | i2 | 85.113 | 20.0206489675516 | 309 | 44 | 30 | 2 | 27 | 334 | 990395 | 990702 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 20361 | 315 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 8202198 | 8202198 | PRJNA564013_P_NODE_226487_length_281_cov_29.840909_g223636_i0 | PRJNA564013 | 226487 | 281 | 29.840909 | 83.85295429 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 243 | 1.4300000000000001e-59 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g223636 | i0 | 83.588 | 4.93238434163701 | 262 | 39 | 93 | 4 | 22 | 281 | 9647301 | 9647042 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 1386 | 243 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 8203663 | 8203663 | PRJNA564013_P_NODE_30407_length_689_cov_7.471338_g27834_i0 | PRJNA564013 | 30407 | 689 | 7.471338 | 51.47751882 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 311 | 1.03e-79 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g27834 | i0 | 79.618 | 1.11320754716981 | 471 | 67 | 65 | 21 | 47 | 497 | 1267095 | 1266634 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 767 | 311 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 8204768 | 8204768 | PRJNA564013_P_NODE_359247_length_192_cov_3.167939_g356395_i0 | PRJNA564013 | 359247 | 192 | 3.167939 | 6.08244288 | Stigmatella aurantiaca | 41 | Bacteria | Bacteria | 294 | 2.49e-75 | NTclustered | gi|309390350|gb|CP002271.1| | 378806 | g356395 | i0 | 94.271 | 110.963541666667 | 192 | 11 | 100 | 0 | 1 | 192 | 6480074 | 6480265 | Stigmatella aurantiaca DW4/3-1, complete genome | blastn | 21305 | 294 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 8204959 | 8204959 | PRJNA564013_P_NODE_372047_length_176_cov_5.104348_g369195_i0 | PRJNA564013 | 372047 | 176 | 5.104348 | 8.98365248 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 174 | 3.04e-39 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g369195 | i0 | 87.919 | 1.82954545454545 | 149 | 16 | 84 | 2 | 29 | 176 | 4352034 | 4351887 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 322 | 174 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 9477988 | 9477988 | PRJNA564013_P_NODE_23508_length_769_cov_5.384181_g21126_i0 | PRJNA564013 | 23508 | 769 | 5.384181 | 41.40435189 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 326 | 4.1199999999999995e-84 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g21126 | i0 | 75.391 | 5.8556566970091 | 768 | 139 | 95 | 38 | 39 | 769 | 6136507 | 6137261 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 4503 | 326 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10753736 | 10753736 | PRJNA564013_P_NODE_231469_length_277_cov_4.675926_g228617_i0 | PRJNA564013 | 231469 | 277 | 4.675926 | 12.95231502 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g228617 | i0 | 100 | 0.407942238267148 | 29 | 0 | 10 | 0 | 118 | 146 | 8090370 | 8090398 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 113 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 10753920 | 10753920 | PRJNA564013_P_NODE_242589_length_267_cov_11.160194_g239737_i0 | PRJNA564013 | 242589 | 267 | 11.160194 | 29.79771798 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 91.6 | 5.18e-14 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g239737 | i0 | 92.188 | 20.0936329588015 | 64 | 5 | 24 | 0 | 180 | 243 | 1441977 | 1441914 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 5365 | 91.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 10755432 | 10755432 | PRJNA564013_P_NODE_322669_length_212_cov_1.880795_g319817_i0 | PRJNA564013 | 322669 | 212 | 1.880795 | 3.9872854 | Corallococcus coralloides | 184914 | Bacteria | Bacteria | 73.1 | 1.43e-8 | NTclustered | gi|380727201|gb|CP003389.1| | 1144275 | g319817 | i0 | 84.932 | 0.344339622641509 | 73 | 9 | 34 | 2 | 108 | 179 | 3543605 | 3543676 | Corallococcus coralloides DSM 2259, complete genome | blastn | 73 | 73.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 10756576 | 10756576 | PRJNA564013_P_NODE_44349_length_587_cov_6.081749_g41616_i0 | PRJNA564013 | 44349 | 587 | 6.081749 | 35.69986663 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 267 | 1.9000000000000001e-66 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g41616 | i0 | 76.525 | 1.86712095400341 | 541 | 95 | 89 | 27 | 22 | 542 | 6954581 | 6954053 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 1096 | 267 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 12026511 | 12026511 | PRJNA564013_P_NODE_141970_length_359_cov_4.708054_g139121_i0 | PRJNA564013 | 141970 | 359 | 4.708054 | 16.90191386 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 278 | 5.15e-70 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g139121 | i0 | 82.029 | 26.6406685236769 | 345 | 44 | 94 | 14 | 1 | 339 | 2394023 | 2393691 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 9564 | 278 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 12027196 | 12027196 | PRJNA564013_P_NODE_168330_length_335_cov_5.080292_g165480_i0 | PRJNA564013 | 168330 | 335 | 5.080292 | 17.0189782 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 254 | 8.07e-63 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g165480 | i0 | 87.5 | 38.7432835820896 | 224 | 23 | 66 | 3 | 23 | 242 | 3162231 | 3162453 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 12979 | 254 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 17125402 | 17125402 | PRJNA564013_P_NODE_152014_length_349_cov_22.871528_g149165_i0 | PRJNA564013 | 152014 | 349 | 22.871528 | 79.82163272 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g149165 | i0 | 100 | 0.0830945558739255 | 29 | 0 | 8 | 0 | 255 | 283 | 10627315 | 10627287 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 20951267 | 20951267 | PRJNA564013_P_NODE_218617_length_289_cov_1.140351_g215766_i0 | PRJNA564013 | 218617 | 289 | 1.140351 | 3.29561439 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 176 | 1.52e-39 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g215766 | i0 | 80.242 | 0.858131487889273 | 248 | 37 | 83 | 10 | 26 | 264 | 4558179 | 4558423 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 248 | 176 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 20951593 | 20951593 | PRJNA564013_P_NODE_237557_length_272_cov_2.398104_g234705_i0 | PRJNA564013 | 237557 | 272 | 2.398104 | 6.52284288 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 235 | 2.31e-57 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g234705 | i0 | 83.794 | 1.03308823529412 | 253 | 35 | 92 | 6 | 21 | 270 | 2245931 | 2245682 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 281 | 235 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 23501071 | 23501071 | PRJNA564013_P_NODE_194079_length_312_cov_1.294821_g191228_i0 | PRJNA564013 | 194079 | 312 | 1.294821 | 4.03984152 | Archangium violaceum | 83451 | Bacteria | Bacteria | 488 | 1.88e-133 | NTclustered | gi|1981856374|gb|CP069338.1| | 83451 | g191228 | i0 | 95.71 | 3.82371794871795 | 303 | 13 | 97 | 0 | 8 | 310 | 12546415 | 12546113 | Archangium violaceum strain SDU34 chromosome, complete genome | blastn | 1193 | 488 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 23502264 | 23502264 | PRJNA564013_P_NODE_257599_length_255_cov_3.448454_g254747_i0 | PRJNA564013 | 257599 | 255 | 3.448454 | 8.7935577 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 204 | 6.04e-48 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g254747 | i0 | 89.873 | 0.619607843137255 | 158 | 16 | 62 | 0 | 23 | 180 | 9151326 | 9151483 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 158 | 204 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 24778399 | 24778399 | PRJNA564013_P_NODE_42760_length_596_cov_8.418692_g40031_i0 | PRJNA564013 | 42760 | 596 | 8.418692 | 50.17540432 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 279 | 2.48e-70 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g40031 | i0 | 83.072 | 0.810402684563758 | 319 | 42 | 53 | 6 | 233 | 545 | 3759646 | 3759334 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 483 | 279 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 25358541 | 25358541 | PRJNA564013_P_NODE_24460_length_757_cov_3.669540_g22056_i0 | PRJNA564013 | 24460 | 757 | 3.66954 | 27.7784178 | Corallococcus | 83461 | Bacteria | Bacteria | 972 | 0 | NTclustered | gi|2094564806|gb|CP079946.1| | 1521117 | g22056 | i0 | 91.086 | 5.57859973579921 | 718 | 64 | 95 | 0 | 22 | 739 | 2306275 | 2305558 | Corallococcus sp. EGB chromosome, complete genome | blastn | 4223 | 972 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. EGB |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;