contig_metadata
4 rows where analysis = "blastn", bioproject = "PRJNA564013" and tax_phylum = "Evosea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3683034 | 3683034 | PRJNA564013_P_NODE_163943_length_339_cov_3.924460_g161093_i0 | PRJNA564013 | 163943 | 339 | 3.92446 | 13.3039194 | Physariida | 5789 | Evosea | other_Eukaryota | 233 | 1.07e-56 | NTclustered | gi|3221|emb|V01159.1| | 5791 | g161093 | i0 | 87.204 | 2.36578171091445 | 211 | 19 | 61 | 8 | 1 | 207 | 5608 | 5814 | Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA | blastn | 802 | 233 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Physaraceae | Physarum | Physarum polycephalum | ||
| 6929033 | 6929033 | PRJNA564013_P_NODE_315446_length_216_cov_2.296774_g312594_i0 | PRJNA564013 | 315446 | 216 | 2.296774 | 4.96103184 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 100 | 6.71e-17 | NTclustered | gi|470252539|ref|XM_004359310.1| | 261658 | g312594 | i0 | 80.916 | 3.66203703703704 | 131 | 21 | 60 | 4 | 23 | 151 | 397 | 525 | Cavenderia fasciculata ADP-ribosylation factor (arfA), partial mRNA | blastn | 791 | 100 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 15160872 | 15160872 | PRJNA564013_P_NODE_339132_length_204_cov_4.083916_g336280_i0 | PRJNA564013 | 339132 | 204 | 4.083916 | 8.33118864 | Physariida | 5789 | Evosea | other_Eukaryota | 147 | 7.939999999999999e-31 | NTclustered | gi|37515398|emb|AJ584697.1| | 159720 | g336280 | i0 | 86.567 | 26.828431372549 | 134 | 16 | 66 | 2 | 61 | 194 | 9539 | 9670 | Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 | blastn | 5473 | 147 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Physaraceae | Fuligo | Fuligo septica | ||
| 23500700 | 23500700 | PRJNA564013_P_NODE_178419_length_326_cov_5.271698_g175569_i0 | PRJNA564013 | 178419 | 326 | 5.271698 | 17.18573548 | Entamoeba terrapinae | 110771 | Evosea | other_Eukaryota | 128 | 4.95e-25 | NTclustered | gi|148923265|gb|EF421319.1| | 110771 | g175569 | i0 | 94.048 | 2.55828220858896 | 84 | 5 | 26 | 0 | 32 | 115 | 728 | 645 | Entamoeba terrapinae strain M tRNA array unit SQCK genomic sequence | blastn | 834 | 128 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba terrapinae |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;