RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA564013" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA564013 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
551907 551907 PRJNA564013_P_NODE_361821_length_190_cov_4.519380_g358969_i0 PRJNA564013 361821 190 4.51938 8.586822 Biavirus raunefjordenense 3059777 Viruses Viruses 54.7 0.005   NTclustered gi|2500387999|ref|NC_077221.1| 1499987 g358969 i0 100 0.352631578947368 29 0 15 0 1 29 658881 658853 Prymnesium kappa virus genome assembly, chromosome: 1 blastn 67 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae Biavirus Biavirus raunefjordenense
12026992 12026992 PRJNA564013_P_NODE_159470_length_343_cov_4.319149_g156620_i0 PRJNA564013 159470 343 4.319149 14.81468107 Adintovirus androctonus13035 3115887 Viruses Viruses 427 4.609999999999999e-115   NTclustered gi|2710390252|tpg|BK066392.1| 3115887 g156620 i0 94.286 0.816326530612245 280 15 82 1 1 280 6995 7273 MAG TPA_asm: Adintovirus androctonus13035 isolate Adinto13035 genomic sequence blastn 280 427 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus androctonus13035
14577064 14577064 PRJNA564013_P_NODE_169572_length_334_cov_4.223443_g166722_i0 PRJNA564013 169572 334 4.223443 14.10629962 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.031   NTclustered gi|9964314|ref|NC_002520.1| 28321 g166722 i0 94.286 0.104790419161677 35 1 10 1 204 237 153509 153475 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;