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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA562549" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA562549 · 32 ✖

analysis 1

  • blastn · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
545605 545605 PRJNA562549_P_NODE_12881_length_320_cov_1.281853_g12648_i0 PRJNA562549 12881 320 1.281853 4.1019296 Hirundo rustica 43150 Chordata Chordata 219 2.8e-52   NTclustered gi|2552466851|ref|XM_058424032.1| 43150 g12648 i0 80.565 9.728125 283 55 88 0 33 315 1119 837 PREDICTED: Hirundo rustica katanin catalytic subunit A1 like 2 (KATNAL2), transcript variant X4, mRNA blastn 3113 219 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Hirundinidae Hirundo Hirundo rustica
545667 545667 PRJNA562549_P_NODE_19601_length_262_cov_3.597015_g19368_i0 PRJNA562549 19601 262 3.597015 9.4241793 Strigops habroptila 2489341 Chordata Chordata 261 3.65e-65   NTclustered gi|1728924633|ref|XM_030474427.1| 2489341 g19368 i0 85.156 65.763358778626 256 36 97 2 8 262 933 679 PREDICTED: Strigops habroptila protein phosphatase 4 catalytic subunit (PPP4C), transcript variant X1, mRNA blastn 17230 261 1 Eukaryota Opisthokonta Metazoa Chordata Aves Psittaciformes Psittacidae Strigops Strigops habroptila
1821569 1821569 PRJNA562549_P_NODE_8922_length_385_cov_2.151235_g8689_i0 PRJNA562549 8922 385 2.151235 8.28225475 Meleagris gallopavo 9103 Chordata Chordata 52.8 0.037   NTclustered gi|2721460871|emb|HG999689.4| 9103 g8689 i0 100 0.0727272727272727 28 0 7 0 13 40 13254975 13254948 Meleagris gallopavo genome assembly, chromosome: 10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Meleagris Meleagris gallopavo
3096722 3096722 PRJNA562549_P_NODE_31363_length_211_cov_1.300000_g31130_i0 PRJNA562549 31363 211 1.3 2.743 Mus pahari 10093 Chordata Chordata 56.5 0.001   NTclustered gi|1195521653|ref|XM_021218332.1| 10093 g31130 i0 100 4.28909952606635 30 0 14 0 58 87 1386 1357 PREDICTED: Mus pahari tudor domain containing 6 (Tdrd6), transcript variant X2, mRNA blastn 905 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus pahari
5649641 5649641 PRJNA562549_P_NODE_3885_length_576_cov_2.728155_g3701_i0 PRJNA562549 3885 576 2.728155 15.7141728 Manis pentadactyla 143292 Chordata Chordata 460 7.969999999999998e-125   NTclustered gi|2522797992|ref|XM_036890601.2| 143292 g3701 i0 81.475 87.7847222222222 583 88 100 13 1 576 1254 685 PREDICTED: Manis pentadactyla casein kinase 1 gamma 2 (CSNK1G2), transcript variant X4, mRNA blastn 50564 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Manis Manis pentadactyla
6234323 6234323 PRJNA562549_P_NODE_13645_length_311_cov_2.488000_g13412_i0 PRJNA562549 13645 311 2.488 7.73768 Passerellidae 1729112 Chordata Chordata 237 7.48e-58   NTclustered gi|2461442477|ref|XM_054295136.1| 40204 g13412 i0 81.754 92.2250803858521 285 50 91 2 27 310 1047 764 PREDICTED: Melozone crissalis microtubule affinity regulating kinase 2 (MARK2), transcript variant X1, mRNA blastn 28682 237 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Passerellidae Melozone Melozone crissalis
7508674 7508674 PRJNA562549_P_NODE_10266_length_358_cov_163.592593_g10033_i0 PRJNA562549 10266 358 163.592593 585.66148294 Chordata 7711 Chordata Chordata 87.9 9.29e-13   NTclustered gi|2664035142|ref|XR_009960980.1| 8795 g10033 i0 90.769 1.10055865921788 65 6 18 0 278 342 200 136 PREDICTED: Rhea pennata uncharacterized LOC134152251 (LOC134152251), ncRNA blastn 394 87.9 1 Eukaryota Opisthokonta Metazoa Chordata Aves Rheiformes Rheidae Rhea Rhea pennata
8198492 8198492 PRJNA562549_P_NODE_10227_length_359_cov_5.936242_g9994_i0 PRJNA562549 10227 359 5.936242 21.31110878 Fringilla coelebs 37598 Chordata Chordata 52.8 0.034   NTclustered gi|2917610922|emb|OZ228690.1| 37598 g9994 i0 100 0.0779944289693593 28 0 8 0 33 60 63098159 63098186 Fringilla coelebs genome assembly, chromosome: Z blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Fringilla Fringilla coelebs
8198658 8198658 PRJNA562549_P_NODE_29467_length_217_cov_2.179487_g29234_i0 PRJNA562549 29467 217 2.179487 4.72948679 Pseudonaja textilis 8673 Chordata Chordata 152 1.84e-32   NTclustered gi|1488392563|ref|XM_026720792.1| 8673 g29234 i0 79.535 15.3778801843318 215 42 99 2 1 214 1200 1413 PREDICTED: Pseudonaja textilis valosin containing protein (VCP), mRNA blastn 3337 152 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Pseudonaja Pseudonaja textilis
10059314 10059314 PRJNA562549_P_NODE_1568_length_864_cov_24.782067_g1471_i0 PRJNA562549 1568 864 24.782067 214.11705888 root 1 Root_unresolved Root_unresolved 54.7 0.024   NTclustered gi|2327602149|ref|XM_028803446.2| 27687 g1471 i0 100 0.369212962962963 29 0 3 0 741 769 6483 6455 PREDICTED: Erpetoichthys calabaricus zinc finger homeobox 4 (zfhx4), transcript variant X2, mRNA blastn 319 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
10749994 10749994 PRJNA562549_P_NODE_1869_length_797_cov_3.013587_g1762_i0 PRJNA562549 1869 797 3.013587 24.01828839 Stegostoma tigrinum 3053191 Chordata Chordata 279 3.37e-70   NTclustered gi|2579326057|ref|XM_048562081.2| 3053191 g1762 i0 74.772 14.7314930991217 658 148 81 18 13 661 848 1496 PREDICTED: Stegostoma tigrinum serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform (LOC125466915), mRNA blastn 11741 279 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Orectolobiformes Stegostomatidae Stegostoma Stegostoma tigrinum
12024705 12024705 PRJNA562549_P_NODE_13330_length_314_cov_4.826087_g13097_i0 PRJNA562549 13330 314 4.826087 15.15391318 Carcharodon carcharias 13397 Chordata Chordata 220 7.61e-53   NTclustered gi|2031766177|ref|XM_041192641.1| 13397 g13097 i0 79.487 5.21974522292994 312 62 99 2 3 313 877 1187 PREDICTED: Carcharodon carcharias RuvB-like AAA ATPase 1 (ruvbl1), mRNA blastn 1639 220 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Lamniformes Alopiidae Carcharodon Carcharodon carcharias
12024870 12024870 PRJNA562549_P_NODE_3170_length_630_cov_12.349736_g3030_i0 PRJNA562549 3170 630 12.349736 77.8033368 Nyctereutes procyonoides 34880 Chordata Chordata 387 1.51e-102   NTclustered gi|2492098400|ref|XM_055323263.1| 34880 g3030 i0 80.962 44.9111111111111 499 86 79 9 64 558 632 139 PREDICTED: Nyctereutes procyonoides ADP-ribosylation factor 2 (LOC129508290), transcript variant X1, mRNA blastn 28294 387 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Nyctereutes Nyctereutes procyonoides
12024882 12024882 PRJNA562549_P_NODE_33070_length_208_cov_1.326531_g32837_i0 PRJNA562549 33070 208 1.326531 2.75918448 Crotalus tigris 88082 Chordata Chordata 154 4.85e-33   NTclustered gi|1974155137|ref|XM_039337940.1| 88082 g32837 i0 80.193 5.55769230769231 207 39 99 2 3 208 2153 1948 PREDICTED: Crotalus tigris RNA polymerase II subunit A (POLR2A), mRNA blastn 1156 154 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Viperidae Crotalus Crotalus tigris
14574618 14574618 PRJNA562549_P_NODE_11112_length_344_cov_2.837456_g10879_i0 PRJNA562549 11112 344 2.837456 9.76084864 Talpa occidentalis 50954 Chordata Chordata 337 8.019999999999998e-88   NTclustered gi|2470677096|ref|XM_037513581.2| 50954 g10879 i0 84.503 93.375 342 52 99 1 1 342 238 578 PREDICTED: Talpa occidentalis casein kinase 1 epsilon (CSNK1E), transcript variant X3, mRNA blastn 32121 337 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Talpidae Talpa Talpa occidentalis
14574753 14574753 PRJNA562549_P_NODE_26292_length_229_cov_2.220238_g26059_i0 PRJNA562549 26292 229 2.220238 5.08434502 Monodelphis domestica 13616 Chordata Chordata 182 2.5e-41   NTclustered gi|2514317326|ref|XM_056801224.1| 13616 g26059 i0 83.168 17.3100436681223 202 30 87 3 4 203 1741 1542 PREDICTED: Monodelphis domestica beta-adrenergic receptor kinase 1 (LOC130454916), mRNA blastn 3964 182 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Didelphimorphia Didelphidae Monodelphis Monodelphis domestica
15158886 15158886 PRJNA562549_P_NODE_25932_length_231_cov_1.147059_g25699_i0 PRJNA562549 25932 231 1.147059 2.64970629 Lampetra 13103 Chordata Chordata 58.4 4.44e-4   NTclustered gi|2805739099|emb|OZ078460.1| 7748 g25699 i0 100 0.268398268398268 31 0 13 0 185 215 2562481 2562451 Lampetra fluviatilis genome assembly, chromosome: 57 blastn 62 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lampetra Lampetra fluviatilis
15848608 15848608 PRJNA562549_P_NODE_25293_length_233_cov_2.267442_g25060_i0 PRJNA562549 25293 233 2.267442 5.28313986 Galeopterus variegatus 482537 Chordata Chordata 137 5.6000000000000005e-28   NTclustered gi|667260958|ref|XM_008569218.1| 482537 g25060 i0 87.395 7.90987124463519 119 15 51 0 17 135 1566 1684 PREDICTED: Galeopterus variegatus heat shock 70kDa protein 8 (HSPA8), mRNA blastn 1843 137 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Dermoptera Cynocephalidae Galeopterus Galeopterus variegatus
18397622 18397622 PRJNA562549_P_NODE_22515_length_246_cov_2.237838_g22282_i0 PRJNA562549 22515 246 2.237838 5.50508148 Mus musculus 10090 Chordata Chordata 52.8 0.022   NTclustered gi|1039744595|ref|XR_001780889.1| 10090 g22282 i0 100 0.227642276422764 28 0 11 0 211 238 355 328 PREDICTED: Mus musculus predicted gene, 30127 (Gm30127), ncRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
18397658 18397658 PRJNA562549_P_NODE_26915_length_227_cov_1.566265_g26682_i0 PRJNA562549 26915 227 1.566265 3.55542155 Dendropsophus ebraccatus 150705 Chordata Chordata 165 2.49e-36   NTclustered gi|2853414034|ref|XM_069965489.1| 150705 g26682 i0 81.959 57.0044052863436 194 35 85 0 3 196 234 427 PREDICTED: Dendropsophus ebraccatus HRas proto-oncogene, GTPase (HRAS), transcript variant X4, mRNA blastn 12940 165 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Hylidae Dendropsophus Dendropsophus ebraccatus
18982146 18982146 PRJNA562549_P_NODE_15835_length_289_cov_7.192982_g15602_i0 PRJNA562549 15835 289 7.192982 20.78771798 Lampetra 13103 Chordata Chordata 60.2 1.6e-4   NTclustered gi|2805712565|emb|OZ078405.1| 7748 g15602 i0 100 1.94463667820069 32 0 11 0 58 89 18131456 18131425 Lampetra fluviatilis genome assembly, chromosome: 2 blastn 562 60.2 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lampetra Lampetra fluviatilis
20947988 20947988 PRJNA562549_P_NODE_5557_length_490_cov_5.689977_g5325_i0 PRJNA562549 5557 490 5.689977 27.8808873 Suncus etruscus 109475 Chordata Chordata 294 7.190000000000001e-75   NTclustered gi|2279985851|ref|XM_049783338.1| 109475 g5325 i0 78.876 13.8244897959184 445 86 90 7 47 487 457 17 PREDICTED: Suncus etruscus mago homolog B, exon junction complex subunit (MAGOHB), mRNA blastn 6774 294 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Soricidae Suncus Suncus etruscus
21532821 21532821 PRJNA562549_P_NODE_20437_length_257_cov_4.244898_g20204_i0 PRJNA562549 20437 257 4.244898 10.90938786 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 204 6.1e-48   NTclustered gi|2318675255|ref|XM_051183297.1| 109678 g20204 i0 83.036 40.9571984435798 224 38 87 0 34 257 284 61 PREDICTED: Phodopus roborovskii PHD finger-like domain-containing protein 5A (LOC127221387), mRNA blastn 10526 204 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Phodopus Phodopus roborovskii
22222710 22222710 PRJNA562549_P_NODE_16738_length_282_cov_1.601810_g16505_i0 PRJNA562549 16738 282 1.60181 4.5171042 Jaculus jaculus 51337 Chordata Chordata 159 1.49e-34   NTclustered gi|2147835455|ref|XM_004673284.2| 51337 g16505 i0 81.218 31.5141843971631 197 37 70 0 17 213 107 303 PREDICTED: Jaculus jaculus eukaryotic translation initiation factor 4A2 (Eif4a2), transcript variant X1, mRNA blastn 8887 159 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Dipodidae Jaculus Jaculus jaculus
22222762 22222762 PRJNA562549_P_NODE_23258_length_243_cov_1.060440_g23025_i0 PRJNA562549 23258 243 1.06044 2.5768692 Lampetra planeri 7750 Chordata Chordata 71.3 6.05e-8   NTclustered gi|2814976159|emb|OZ078388.2| 7750 g23025 i0 87.097 0.995884773662551 62 8 26 0 125 186 5512678 5512739 Lampetra planeri genome assembly, chromosome: 65 blastn 242 71.3 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lampetra Lampetra planeri
22222887 22222887 PRJNA562549_P_NODE_37718_length_193_cov_2.606061_g37485_i0 PRJNA562549 37718 193 2.606061 5.02969773 Moschus berezovskii 68408 Chordata Chordata 52.8 0.017   NTclustered gi|2492351414|ref|XM_055438423.1| 68408 g37485 i0 100 0.145077720207254 28 0 15 0 95 122 524 497 PREDICTED: Moschus berezovskii LDOC1 regulator of NFKB signaling (LDOC1), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
22222922 22222922 PRJNA562549_P_NODE_638_length_1220_cov_22.790336_g585_i0 PRJNA562549 638 1220 22.790336 278.0420992 Oikopleura longicauda 107032 Chordata Chordata 833 0   NTclustered gi|6230865|dbj|AB034209.1| 107032 g585 i0 80.018 91.1131147540984 1141 216 93 12 38 1172 16 1150 Oikopleura longicauda OilCA1 mRNA for cytoplasmic actin, complete cds blastn 111158 833 1 Eukaryota Opisthokonta Metazoa Chordata Appendicularia Copelata Oikopleuridae Oikopleura Oikopleura longicauda
22807949 22807949 PRJNA562549_P_NODE_21858_length_249_cov_5.218085_g21625_i0 PRJNA562549 21858 249 5.218085 12.99303165 Testudines 8459 Chordata Chordata 139 1.68e-28   NTclustered gi|1985420465|ref|XM_039494818.1| 260615 g21625 i0 81.657 41.6586345381526 169 29 67 2 8 175 527 360 PREDICTED: Mauremys reevesii dnaJ homolog subfamily B member 2-like (LOC120374717), transcript variant X7, mRNA blastn 10373 139 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Geoemydidae Mauremys Mauremys reevesii
22807950 22807950 PRJNA562549_P_NODE_22258_length_247_cov_5.161290_g22025_i0 PRJNA562549 22258 247 5.16129 12.7483863 Sorex 9379 Chordata Chordata 252 2.05e-62   NTclustered gi|2487318383|ref|XM_004615848.2| 42254 g22025 i0 85.02 92.6558704453441 247 37 100 0 1 247 511 757 PREDICTED: Sorex araneus protein phosphatase 4 catalytic subunit (PPP4C), mRNA blastn 22886 252 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Soricidae Sorex Sorex araneus
22808052 22808052 PRJNA562549_P_NODE_38678_length_174_cov_4.035398_g38445_i0 PRJNA562549 38678 174 4.035398 7.02159252 root 1 Root_unresolved Root_unresolved 58.4 3.15e-4   NTclustered gi|2852067098|ref|XM_069804051.1| 8969 g38445 i0 100 5.51149425287356 31 0 18 0 144 174 347 377 PREDICTED: Haliaeetus albicilla putative per-hexamer repeat protein 5 (LOC138689317), mRNA blastn 959 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Aves Accipitriformes Accipitridae Haliaeetus Haliaeetus albicilla
24082842 24082842 PRJNA562549_P_NODE_34379_length_206_cov_0.896552_g34146_i0 PRJNA562549 34379 206 0.896552 1.84689712 Passeriformes 9126 Chordata Chordata 52.8 0.018   NTclustered gi|2312819917|ref|XM_030230818.2| 9135 g34146 i0 100 2.99029126213592 28 0 14 0 78 105 1768 1741 PREDICTED: Serinus canaria keratin, type II cytoskeletal 4-like (LOC103823900), mRNA blastn 616 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Serinus Serinus canaria
24771983 24771983 PRJNA562549_P_NODE_26600_length_228_cov_1.760479_g26367_i0 PRJNA562549 26600 228 1.760479 4.01389212 Heteronotia binoei 13085 Chordata Chordata 171 5.38e-38   NTclustered gi|2593496128|ref|XM_060236270.1| 13085 g26367 i0 80.631 4.60526315789474 222 41 97 2 8 228 1309 1089 PREDICTED: Heteronotia binoei valosin containing protein (VCP), mRNA blastn 1050 171 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Gekkonidae Heteronotia Heteronotia binoei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;