contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA562549" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2406213 | 2406213 | PRJNA562549_P_NODE_23762_length_240_cov_2.385475_g23529_i0 | PRJNA562549 | 23762 | 240 | 2.385475 | 5.72514 | Bacillati | 1783272 | Bacteria | Bacteria | 444 | 3.05e-120 | NTclustered | gi|470488168|ref|NR_076854.1| | 1579 | g23529 | i0 | 100 | 421.7625 | 240 | 0 | 100 | 0 | 1 | 240 | 2645 | 2884 | Lactobacillus acidophilus strain 30SC 23S ribosomal RNA gene, complete sequence | blastn | 101223 | 444 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus acidophilus | ||
| 2406293 | 2406293 | PRJNA562549_P_NODE_37202_length_197_cov_2.764706_g36969_i0 | PRJNA562549 | 37202 | 197 | 2.764706 | 5.44647082 | Lactobacillus | 1578 | Bacteria | Bacteria | 364 | 1.929999999999999e-96 | NTclustered | gi|2913177562|gb|CP180627.1| | 47770 | g36969 | i0 | 100 | 385.274111675127 | 197 | 0 | 100 | 0 | 1 | 197 | 1146046 | 1145850 | Lactobacillus crispatus strain T31e chromosome, complete genome | blastn | 75899 | 364 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 4958939 | 4958939 | PRJNA562549_P_NODE_25764_length_231_cov_2.870588_g25531_i0 | PRJNA562549 | 25764 | 231 | 2.870588 | 6.63105828 | Staphylococcus | 1279 | Bacteria | Bacteria | 427 | 2.9399999999999998e-115 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g25531 | i0 | 100 | 534.761904761905 | 231 | 0 | 100 | 0 | 1 | 231 | 748724 | 748494 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 123530 | 427 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 4959010 | 4959010 | PRJNA562549_P_NODE_35084_length_204_cov_2.328671_g34851_i0 | PRJNA562549 | 35084 | 204 | 2.328671 | 4.75048884 | root | 1 | Root_unresolved | Root_unresolved | 377 | 2.59e-100 | NTclustered | gi|308824094|emb|FP565809.1| | 1511 | g34851 | i0 | 100 | 110 | 204 | 0 | 100 | 0 | 1 | 204 | 15185 | 14982 | Clostridium sticklandii str. DSM 519 chromosome, complete genome | blastn | 22440 | 377 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Filifactoraceae | Acetoanaerobium | Acetoanaerobium sticklandii | ||
| 6234444 | 6234444 | PRJNA562549_P_NODE_29445_length_217_cov_2.621795_g29212_i0 | PRJNA562549 | 29445 | 217 | 2.621795 | 5.68929515 | Staphylococcus | 1279 | Bacteria | Bacteria | 396 | 7.689999999999997e-106 | NTclustered | gi|1279117992|gb|MG547954.1| | 1290 | g29212 | i0 | 99.539 | 169.972350230415 | 217 | 1 | 100 | 0 | 1 | 217 | 229 | 13 | Staphylococcus hominis strain SOT3 16S ribosomal RNA gene, partial sequence | blastn | 36884 | 396 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 11334040 | 11334040 | PRJNA562549_P_NODE_38409_length_182_cov_5.545455_g38176_i0 | PRJNA562549 | 38409 | 182 | 5.545455 | 10.0927281 | Lactobacillus | 1578 | Bacteria | Bacteria | 337 | 3.82e-88 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g38176 | i0 | 100 | 471.587912087912 | 182 | 0 | 100 | 0 | 1 | 182 | 90356 | 90537 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 85829 | 337 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 12609761 | 12609761 | PRJNA562549_P_NODE_18870_length_267_cov_1.936893_g18637_i0 | PRJNA562549 | 18870 | 267 | 1.936893 | 5.17150431 | Veillonella | 29465 | Bacteria | Bacteria | 494 | 3.38e-135 | NTclustered | gi|1540028531|emb|LR134375.1| | 39778 | g18637 | i0 | 100 | 633.655430711611 | 267 | 0 | 100 | 0 | 1 | 267 | 1410282 | 1410548 | Veillonella dispar strain NCTC11831 genome assembly, chromosome: 1 | blastn | 169186 | 494 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella dispar | ||
| 14574655 | 14574655 | PRJNA562549_P_NODE_14992_length_297_cov_2.118644_g14759_i0 | PRJNA562549 | 14992 | 297 | 2.118644 | 6.29237268 | Granulicatella adiacens | 46124 | Bacteria | Bacteria | 549 | 8.029999999999997e-152 | NTclustered | gi|2315116068|gb|CP106751.1| | 46124 | g14759 | i0 | 100 | 421.080808080808 | 297 | 0 | 100 | 0 | 1 | 297 | 1630727 | 1630431 | Granulicatella adiacens strain KHUD_009 chromosome, complete genome | blastn | 125061 | 549 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Granulicatella | Granulicatella adiacens | ||
| 15158884 | 15158884 | PRJNA562549_P_NODE_25752_length_231_cov_3.317647_g25519_i0 | PRJNA562549 | 25752 | 231 | 3.317647 | 7.66376457 | Bacillati | 1783272 | Bacteria | Bacteria | 409 | 1.0600000000000001e-109 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g25519 | i0 | 99.119 | 492.142857142857 | 227 | 2 | 98 | 0 | 1 | 227 | 748970 | 748744 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 113685 | 409 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 15158895 | 15158895 | PRJNA562549_P_NODE_26872_length_227_cov_1.819277_g26639_i0 | PRJNA562549 | 26872 | 227 | 1.819277 | 4.12975879 | Lactobacillus | 1578 | Bacteria | Bacteria | 420 | 4.81e-113 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g26639 | i0 | 100 | 422.044052863436 | 227 | 0 | 100 | 0 | 1 | 227 | 89909 | 89683 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 95804 | 420 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 16433573 | 16433573 | PRJNA562549_P_NODE_36793_length_200_cov_3.978417_g36560_i0 | PRJNA562549 | 36793 | 200 | 3.978417 | 7.956834 | Lactobacillus | 1578 | Bacteria | Bacteria | 370 | 4.22e-98 | NTclustered | gi|2096299657|gb|CP083392.1| | 47770 | g36560 | i0 | 100 | 426.045 | 200 | 0 | 100 | 0 | 1 | 200 | 90916 | 90717 | Lactobacillus crispatus strain Lc1226 chromosome, complete genome | blastn | 85209 | 370 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus crispatus | ||
| 17123360 | 17123360 | PRJNA562549_P_NODE_15774_length_290_cov_1.921397_g15541_i0 | PRJNA562549 | 15774 | 290 | 1.921397 | 5.5720513 | Macrococcus armenti | 2875764 | Bacteria | Bacteria | 396 | 1.08e-105 | NTclustered | gi|2099412911|gb|CP083608.1| | 2875764 | g15541 | i0 | 91.379 | 431.834482758621 | 290 | 23 | 99 | 2 | 2 | 290 | 359241 | 358953 | Macrococcus armenti strain JEK37 chromosome, complete genome | blastn | 125232 | 396 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Macrococcus | Macrococcus armenti | ||
| 19672294 | 19672294 | PRJNA562549_P_NODE_33836_length_207_cov_0.890411_g33603_i0 | PRJNA562549 | 33836 | 207 | 0.890411 | 1.84315077 | Mammaliicoccus stepanovicii | 643214 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|1231729876|emb|LT906462.1| | 643214 | g33603 | i0 | 96.774 | 0.14975845410628 | 31 | 1 | 15 | 0 | 171 | 201 | 546073 | 546103 | Staphylococcus stepanovicii strain NCTC13839 genome assembly, chromosome: 1 | blastn | 31 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Mammaliicoccus | Mammaliicoccus stepanovicii | ||
| 20257364 | 20257364 | PRJNA562549_P_NODE_26496_length_228_cov_3.455090_g26263_i0 | PRJNA562549 | 26496 | 228 | 3.45509 | 7.8776052 | Carnobacterium | 2747 | Bacteria | Bacteria | 422 | 1.34e-113 | NTclustered | gi|1051011622|gb|CP016844.1| | 2751 | g26263 | i0 | 100 | 392.140350877193 | 228 | 0 | 100 | 0 | 1 | 228 | 97138 | 96911 | Carnobacterium maltaromaticum strain TMW 2.1581 chromosome, complete genome | blastn | 89408 | 422 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium maltaromaticum | ||
| 21532738 | 21532738 | PRJNA562549_P_NODE_10437_length_355_cov_3.931973_g10204_i0 | PRJNA562549 | 10437 | 355 | 3.931973 | 13.95850415 | Staphylococcus | 1279 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g10204 | i0 | 100 | 474.380281690141 | 355 | 0 | 100 | 0 | 1 | 355 | 750816 | 750462 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 168405 | 656 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 21532781 | 21532781 | PRJNA562549_P_NODE_16457_length_284_cov_4.771300_g16224_i0 | PRJNA562549 | 16457 | 284 | 4.7713 | 13.550492 | root | 1 | Root_unresolved | Root_unresolved | 525 | 1.2899999999999994e-144 | NTclustered | gi|2556673542|gb|OR367734.1| | 1282 | g16224 | i0 | 100 | 180 | 284 | 0 | 100 | 0 | 1 | 284 | 1414 | 1131 | Staphylococcus epidermidis strain A3 16S ribosomal RNA gene, partial sequence | blastn | 51120 | 525 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 22222892 | 22222892 | PRJNA562549_P_NODE_38178_length_190_cov_2.015504_g37945_i0 | PRJNA562549 | 38178 | 190 | 2.015504 | 3.8294576 | Finegoldia magna | 1260 | Bacteria | Bacteria | 346 | 6.690000000000001e-91 | NTclustered | gi|2127667581|gb|CP085957.1| | 1260 | g37945 | i0 | 99.474 | 211.878947368421 | 190 | 1 | 100 | 0 | 1 | 190 | 426369 | 426180 | Finegoldia magna strain FDAARGOS_1556 chromosome, complete genome | blastn | 40257 | 346 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 22808076 | 22808076 | PRJNA562549_P_NODE_6378_length_456_cov_0.875949_g6145_i0 | PRJNA562549 | 6378 | 456 | 0.875949 | 3.99432744 | Romboutsia | 1501226 | Bacteria | Bacteria | 728 | 0 | NTclustered | gi|1172272411|emb|LN555523.1| | 1115758 | g6145 | i0 | 95.425 | 1166.0548245614 | 459 | 17 | 100 | 4 | 1 | 456 | 3376 | 3833 | Romboutsia ilealis strain CRIB genome assembly, chromosome: chr1 | blastn | 531721 | 734 | 0.991825613079019 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Romboutsia | Romboutsia ilealis | ||
| 23498051 | 23498051 | PRJNA562549_P_NODE_18459_length_270_cov_1.138756_g18226_i0 | PRJNA562549 | 18459 | 270 | 1.138756 | 3.0746412 | Clostridium baratii | 1561 | Bacteria | Bacteria | 464 | 2.6799999999999994e-126 | NTclustered | gi|2695230292|gb|CP124315.1| | 1561 | g18226 | i0 | 97.445 | 1013.4 | 274 | 3 | 100 | 2 | 1 | 270 | 6592 | 6319 | Clostridium baratii strain C161 chromosome | blastn | 273618 | 464 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium baratii | ||
| 24082711 | 24082711 | PRJNA562549_P_NODE_16219_length_286_cov_6.600000_g15986_i0 | PRJNA562549 | 16219 | 286 | 6.6 | 18.876 | Streptococcus | 1301 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|1686100227|gb|MK330575.1| | 28037 | g15986 | i0 | 100 | 324 | 286 | 0 | 100 | 0 | 1 | 286 | 2075 | 1790 | Streptococcus mitis strain PL429 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 92664 | 529 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 24082876 | 24082876 | PRJNA562549_P_NODE_38879_length_167_cov_5.735849_g38646_i0 | PRJNA562549 | 38879 | 167 | 5.735849 | 9.57886783 | Carnobacterium | 2747 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|1051011622|gb|CP016844.1| | 2751 | g38646 | i0 | 100 | 528.041916167665 | 167 | 0 | 100 | 0 | 1 | 167 | 98134 | 98300 | Carnobacterium maltaromaticum strain TMW 2.1581 chromosome, complete genome | blastn | 88183 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium maltaromaticum | ||
| 25357078 | 25357078 | PRJNA562549_P_NODE_13720_length_310_cov_3.441767_g13487_i0 | PRJNA562549 | 13720 | 310 | 3.441767 | 10.6694777 | Bacillales | 1385 | Bacteria | Bacteria | 573 | 4.999999999999998e-159 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g13487 | i0 | 100 | 533.9 | 310 | 0 | 100 | 0 | 1 | 310 | 750202 | 749893 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 165509 | 573 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 25357232 | 25357232 | PRJNA562549_P_NODE_36760_length_201_cov_2.028571_g36527_i0 | PRJNA562549 | 36760 | 201 | 2.028571 | 4.07742771 | Streptococcus | 1301 | Bacteria | Bacteria | 348 | 1.99e-91 | NTclustered | gi|926460225|gb|CP012588.1| | 1308 | g36527 | i0 | 98 | 541.323383084577 | 200 | 4 | 99 | 0 | 2 | 201 | 163082 | 163281 | Streptococcus thermophilus strain MN-BM-A01, complete genome | blastn | 108806 | 348 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;