contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA562549" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2406240 | 2406240 | PRJNA562549_P_NODE_27342_length_225_cov_2.378049_g27109_i0 | PRJNA562549 | 27342 | 225 | 2.378049 | 5.35061025 | Sphingobacterium | 28453 | Bacteria | Bacteria | 411 | 2.869999999999999e-110 | NTclustered | gi|2844665728|gb|CP162525.1| | 259 | g27109 | i0 | 100 | 423.208888888889 | 222 | 0 | 99 | 0 | 3 | 224 | 1058315 | 1058094 | Sphingobacterium thalpophilum strain UPB 1353 chromosome, complete genome | blastn | 95222 | 412 | 0.997572815533981 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium thalpophilum | |
| 2406244 | 2406244 | PRJNA562549_P_NODE_27742_length_224_cov_1.208589_g27509_i0 | PRJNA562549 | 27742 | 224 | 1.208589 | 2.70723936 | Prevotella | 838 | Bacteria | Bacteria | 353 | 4.87e-93 | NTclustered | gi|2093903713|gb|CP082842.1| | 28133 | g27509 | i0 | 100 | 181.40625 | 191 | 0 | 85 | 0 | 34 | 224 | 167125 | 167315 | Prevotella nigrescens strain FDAARGOS_1486 chromosome, complete genome | blastn | 40635 | 353 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella nigrescens | |
| 8198652 | 8198652 | PRJNA562549_P_NODE_28407_length_221_cov_1.625000_g28174_i0 | PRJNA562549 | 28407 | 221 | 1.625 | 3.59125 | Chitinophagaceae bacterium LGM1 | 2837399 | Bacteria | Bacteria | 385 | 1.6999999999999995e-102 | NTclustered | gi|2046997110|gb|CP075895.1| | 2837399 | g28174 | i0 | 98.618 | 228.248868778281 | 217 | 3 | 98 | 0 | 1 | 217 | 1077246 | 1077030 | Chitinophagaceae bacterium LGM1 chromosome, complete genome | blastn | 50443 | 385 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium LGM1 | ||
| 9474338 | 9474338 | PRJNA562549_P_NODE_28448_length_221_cov_1.512500_g28215_i0 | PRJNA562549 | 28448 | 221 | 1.5125 | 3.342625 | Prevotella sp. | 59823 | Bacteria | Bacteria | 326 | 1.05e-84 | NTclustered | gi|2580284204|gb|OR338521.1| | 59823 | g28215 | i0 | 93.243 | 441.656108597285 | 222 | 13 | 100 | 2 | 1 | 221 | 1097 | 877 | Prevotella sp. strain k141_12813 hypothetical protein gene, complete cds | blastn | 97606 | 326 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella sp. | |
| 10059310 | 10059310 | PRJNA562549_P_NODE_15188_length_295_cov_3.991453_g14955_i0 | PRJNA562549 | 15188 | 295 | 3.991453 | 11.77478635 | Sphingobacterium | 28453 | Bacteria | Bacteria | 545 | 1.03e-150 | NTclustered | gi|2306435172|gb|CP094931.1| | 34087 | g14955 | i0 | 100 | 394.637288135593 | 295 | 0 | 100 | 0 | 1 | 295 | 227985 | 227691 | Sphingobacterium faecium strain WB1 chromosome, complete genome | blastn | 116418 | 545 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium faecium | |
| 12024914 | 12024914 | PRJNA562549_P_NODE_36210_length_202_cov_1.843972_g35977_i0 | PRJNA562549 | 36210 | 202 | 1.843972 | 3.72482344 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 267 | 5.77e-67 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g35977 | i0 | 90.547 | 16.8267326732673 | 201 | 19 | 99 | 0 | 1 | 201 | 3043566 | 3043766 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 3399 | 267 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 12609786 | 12609786 | PRJNA562549_P_NODE_22010_length_249_cov_1.308511_g21777_i0 | PRJNA562549 | 22010 | 249 | 1.308511 | 3.25819239 | Sphingobacterium | 28453 | Bacteria | Bacteria | 327 | 3.34e-85 | NTclustered | gi|2306435172|gb|CP094931.1| | 34087 | g21777 | i0 | 97.884 | 337.333333333333 | 189 | 4 | 76 | 0 | 61 | 249 | 226752 | 226940 | Sphingobacterium faecium strain WB1 chromosome, complete genome | blastn | 83996 | 327 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium faecium | |
| 12609822 | 12609822 | PRJNA562549_P_NODE_26870_length_227_cov_1.837349_g26637_i0 | PRJNA562549 | 26870 | 227 | 1.837349 | 4.17078223 | Flectobacillus | 101 | Bacteria | Bacteria | 364 | 2.289999999999999e-96 | NTclustered | gi|4127845|emb|AJ011917.1| | 50419 | g26637 | i0 | 95.633 | 92.8590308370044 | 229 | 6 | 100 | 4 | 1 | 227 | 1425 | 1199 | Flectobacillus sp. 16S rRNA gene, partial, strain MWH38 | blastn | 21079 | 364 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Flectobacillus | Flectobacillus sp. | |
| 15848630 | 15848630 | PRJNA562549_P_NODE_28033_length_222_cov_3.559006_g27800_i0 | PRJNA562549 | 28033 | 222 | 3.559006 | 7.90099332 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 239 | 1.41e-58 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g27800 | i0 | 88.832 | 94.1396396396396 | 197 | 18 | 87 | 2 | 29 | 222 | 421019 | 420824 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 20899 | 239 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 15848695 | 15848695 | PRJNA562549_P_NODE_36493_length_202_cov_0.921986_g36260_i0 | PRJNA562549 | 36493 | 202 | 0.921986 | 1.86241172 | Chryseolinea soli | 2321403 | Bacteria | Bacteria | 222 | 1.27e-53 | NTclustered | gi|1481087475|gb|CP032382.1| | 2321403 | g36260 | i0 | 86.935 | 27.8514851485149 | 199 | 24 | 98 | 2 | 1 | 198 | 902014 | 902211 | Chryseolinea soli strain KIS68-18 chromosome, complete genome | blastn | 5626 | 222 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Fulvivirgaceae | Chryseolinea | Chryseolinea soli | |
| 15848696 | 15848696 | PRJNA562549_P_NODE_36833_length_200_cov_2.776978_g36600_i0 | PRJNA562549 | 36833 | 200 | 2.776978 | 5.553956 | Dyadobacter pollutisoli | 2910158 | Bacteria | Bacteria | 287 | 4.38e-73 | NTclustered | gi|2381182547|gb|CP112998.1| | 2910158 | g36600 | i0 | 92.929 | 306.04 | 198 | 12 | 99 | 2 | 1 | 197 | 3564 | 3368 | Dyadobacter pollutisoli strain U1 chromosome | blastn | 61208 | 287 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Dyadobacter | Dyadobacter pollutisoli | |
| 17123477 | 17123477 | PRJNA562549_P_NODE_29774_length_216_cov_1.883871_g29541_i0 | PRJNA562549 | 29774 | 216 | 1.883871 | 4.06916136 | Hymenobacter sp. BT18 | 2835648 | Bacteria | Bacteria | 388 | 1.28e-103 | NTclustered | gi|1829874072|gb|CP050954.1| | 2835648 | g29541 | i0 | 99.074 | 419.069444444444 | 216 | 2 | 100 | 0 | 1 | 216 | 1253783 | 1253568 | Hymenobacter sp. BT18 chromosome, complete genome | blastn | 90519 | 388 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter sp. BT18 | |
| 17123612 | 17123612 | PRJNA562549_P_NODE_9774_length_368_cov_2.394137_g9541_i0 | PRJNA562549 | 9774 | 368 | 2.394137 | 8.81042416 | Aquirufa nivalisilvae | 2516557 | Bacteria | Bacteria | 562 | 1.31e-155 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g9541 | i0 | 94.309 | 413.654891304348 | 369 | 18 | 99 | 2 | 1 | 366 | 361096 | 360728 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 152225 | 562 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 17708873 | 17708873 | PRJNA562549_P_NODE_38334_length_185_cov_4.943548_g38101_i0 | PRJNA562549 | 38334 | 185 | 4.943548 | 9.1455638 | Aquirufa | 2676247 | Bacteria | Bacteria | 243 | 8.73e-60 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g38101 | i0 | 91.573 | 325.913513513514 | 178 | 12 | 96 | 3 | 9 | 185 | 361433 | 361258 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 60294 | 243 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 19672255 | 19672255 | PRJNA562549_P_NODE_28656_length_220_cov_2.062893_g28423_i0 | PRJNA562549 | 28656 | 220 | 2.062893 | 4.5383646 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 278 | 2.95e-70 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g28423 | i0 | 89.593 | 35.5454545454545 | 221 | 20 | 100 | 2 | 1 | 220 | 3043416 | 3043634 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 7820 | 278 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 20947805 | 20947805 | PRJNA562549_P_NODE_1717_length_827_cov_2.365535_g1615_i0 | PRJNA562549 | 1717 | 827 | 2.365535 | 19.56297445 | Aquirufa lenticrescens | 2696560 | Bacteria | Bacteria | 1064 | 0 | NTclustered | gi|2091518249|gb|CP049834.1| | 2696560 | g1615 | i0 | 90.024 | 405.54292623942 | 832 | 70 | 100 | 10 | 1 | 827 | 217564 | 216741 | Aquirufa lenticrescens strain 9H-EGSE chromosome, complete genome | blastn | 335384 | 1064 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa lenticrescens | |
| 21532746 | 21532746 | PRJNA562549_P_NODE_12017_length_330_cov_3.360595_g11784_i0 | PRJNA562549 | 12017 | 330 | 3.360595 | 11.0899635 | Cloacibacterium | 501783 | Bacteria | Bacteria | 544 | 4.1999999999999997e-150 | NTclustered | gi|1527207946|gb|CP034157.1| | 237258 | g11784 | i0 | 96.364 | 473.530303030303 | 330 | 12 | 100 | 0 | 1 | 330 | 129905 | 130234 | Cloacibacterium normanense strain NRS-1 chromosome, complete genome | blastn | 156265 | 544 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Cloacibacterium | Cloacibacterium normanense | |
| 21532860 | 21532860 | PRJNA562549_P_NODE_26017_length_230_cov_2.414201_g25784_i0 | PRJNA562549 | 26017 | 230 | 2.414201 | 5.5526623 | Flavobacterium | 237 | Bacteria | Bacteria | 425 | 1.05e-114 | NTclustered | gi|2450142067|gb|OQ546431.1| | 239 | g25784 | i0 | 100 | 99.9913043478261 | 230 | 0 | 100 | 0 | 1 | 230 | 246 | 17 | Flavobacterium sp. strain CA_R2146_A 16S ribosomal RNA gene, partial sequence | blastn | 22998 | 425 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. | |
| 21532921 | 21532921 | PRJNA562549_P_NODE_36817_length_200_cov_2.992806_g36584_i0 | PRJNA562549 | 36817 | 200 | 2.992806 | 5.985612 | Bacteroidota | 976 | Bacteria | Bacteria | 222 | 1.25e-53 | NTclustered | gi|332168736|gb|CP002528.1| | 983548 | g36584 | i0 | 86.935 | 260.205 | 199 | 24 | 99 | 2 | 1 | 198 | 2386335 | 2386532 | Dokdonia sp. 4H-3-7-5 chromosome, complete genome | blastn | 52041 | 224 | 0.991071428571429 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Dokdonia | Dokdonia sp. 4H-3-7-5 | |
| 22222680 | 22222680 | PRJNA562549_P_NODE_13578_length_312_cov_1.856574_g13345_i0 | PRJNA562549 | 13578 | 312 | 1.856574 | 5.79251088 | Flavobacterium sp. ZE23DGlu08 | 3059026 | Bacteria | Bacteria | 538 | 1.8399999999999993e-148 | NTclustered | gi|2548163737|gb|CP130045.1| | 3059026 | g13345 | i0 | 97.756 | 557.028846153846 | 312 | 7 | 100 | 0 | 1 | 312 | 884415 | 884726 | Flavobacterium sp. ZE23DGlu08 chromosome, complete genome | blastn | 173793 | 538 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. ZE23DGlu08 | |
| 23498239 | 23498239 | PRJNA562549_P_NODE_6059_length_467_cov_2.431034_g5826_i0 | PRJNA562549 | 6059 | 467 | 2.431034 | 11.35292878 | Fulvivirga ulvae | 2904245 | Bacteria | Bacteria | 536 | 1.0299999999999999e-147 | NTclustered | gi|2174454039|gb|CP089981.1| | 2904245 | g5826 | i0 | 89.041 | 276.967880085653 | 438 | 41 | 93 | 7 | 35 | 467 | 448115 | 447680 | Fulvivirga ulvae strain SS9-22 chromosome, complete genome | blastn | 129344 | 536 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Fulvivirgaceae | Fulvivirga | Fulvivirga ulvae |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;