RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 31 ✖

bioproject 1

  • PRJNA561212 · 31 ✖

analysis 1

  • blastn · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
545175 545175 PRJNA561212_P_NODE_1001_length_1062_cov_27595.039434_g676_i6 PRJNA561212 1001 1062 27595.039434 293059.31878908 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.77e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i6 85.714 1.05461393596987 91 11 8 2 27 115 9209 9119 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
545216 545216 PRJNA561212_P_NODE_12521_length_314_cov_12.190871_g12310_i0 PRJNA561212 12521 314 12.190871 38.27933494 Sobemovirus sp. 2809869 Viruses Viruses 206 2.13e-48   NTclustered gi|2171145024|gb|MZ218240.1| 2809869 g12310 i0 80 400.455414012739 280 54 89 2 11 289 4906 5184 MAG: Sobemovirus sp. isolate 267-k141_60134 genomic sequence blastn 125743 206 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus sp.
545370 545370 PRJNA561212_P_NODE_22821_length_248_cov_0.891429_g22610_i0 PRJNA561212 22821 248 0.891429 2.21074392 Molluscipoxvirus molluscum 3430922 Viruses Viruses 52.8 0.022   NTclustered gi|9628932|ref|NC_001731.1| 10280 g22610 i0 100 0.112903225806452 28 0 11 0 10 37 10643 10670 Molluscum contagiosum virus subtype 1, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Molluscipoxvirus Molluscipoxvirus molluscum
1821039 1821039 PRJNA561212_P_NODE_18702_length_263_cov_1.184211_g18491_i0 PRJNA561212 18702 263 1.184211 3.11447493 Staphylococcus phage Machias 2797423 Viruses Viruses 56.5 0.002   NTclustered gi|1955693358|gb|MW349128.1| 2797423 g18491 i0 94.444 0.136882129277567 36 2 14 0 71 106 80636 80671 Staphylococcus phage Machias, complete genome blastn 36 56.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Staphylococcus phage Machias
1821157 1821157 PRJNA561212_P_NODE_2_length_9251_cov_83.505121_g1_i0 PRJNA561212 2 9251 83.505121 7725.05874371 brine shrimp iflavirus 3 2900464 Viruses Viruses 16831 0   NTclustered gi|2209094758|gb|OL472451.1| 2900464 g1 i0 99.567 10.9891903577992 9234 40 99 0 9 9242 9236 3 MAG: Brine shrimp iflavirus 3 isolate KAZ/15-16 RNA-dependent RNA polymerase gene, complete cds blastn 101661 16831 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 3
3096442 3096442 PRJNA561212_P_NODE_3_length_8346_cov_49.070712_g2_i0 PRJNA561212 3 8346 49.070712 4095.44162352 Zebrafish picornavirus 1 2304617 Viruses Viruses 13572 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g2 i0 96.194 3.03965971722981 8303 305 99 9 24 8322 8298 3 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 25369 13572 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
3096531 3096531 PRJNA561212_P_NODE_963_length_1087_cov_27600.694280_g676_i3 PRJNA561212 963 1087 27600.69428 300019.5468236 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.81e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i3 85.714 1.03035878564857 91 11 8 2 973 1061 9119 9209 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
3682016 3682016 PRJNA561212_P_NODE_22643_length_248_cov_1.205714_g22432_i0 PRJNA561212 22643 248 1.205714 2.99017072 root 1 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|1720276672|gb|MK959613.1| 10493 g22432 i0 100 10.0887096774194 30 0 12 0 42 71 51088 51117 Frog virus 3 strain Z920 blastn 2502 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae Ranavirus Ranavirus rana1
4372952 4372952 PRJNA561212_P_NODE_4_length_5507_cov_45.314869_g2_i1 PRJNA561212 4 5507 45.314869 2495.48983583 Zebrafish picornavirus 1 2304617 Viruses Viruses 8918 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g2 i1 95.994 2.99201016887598 5492 214 99 4 10 5498 7619 2131 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 16477 8918 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5649213 5649213 PRJNA561212_P_NODE_21685_length_250_cov_1.005650_g21474_i0 PRJNA561212 21685 250 1.00565 2.514125 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.023   NTclustered gi|2056813661|tpg|BK057563.1| 2832643 g21474 i0 100 0.112 28 0 11 0 94 121 29021 29048 MAG TPA_asm: Caudoviricetes sp. isolate ctcfb39, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5649392 5649392 PRJNA561212_P_NODE_885_length_1124_cov_17293.054234_g676_i1 PRJNA561212 885 1124 17293.054234 194373.92959016 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.87e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i1 85.714 0.99644128113879 91 11 8 2 27 115 9209 9119 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
6923298 6923298 PRJNA561212_P_NODE_1306_length_946_cov_26928.316151_g676_i7 PRJNA561212 1306 946 26928.316151 254741.87078846 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.57e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i7 85.714 1.18393234672304 91 11 9 2 832 920 9119 9209 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
10749585 10749585 PRJNA561212_P_NODE_13309_length_306_cov_1.424893_g13098_i0 PRJNA561212 13309 306 1.424893 4.36017258 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.029   NTclustered gi|2058079792|tpg|BK043115.1| 2832643 g13098 i0 100 0.0915032679738562 28 0 9 0 214 241 21628 21655 MAG TPA_asm: Caudoviricetes sp. isolate ctrFw23, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12024436 12024436 PRJNA561212_P_NODE_18110_length_267_cov_1.489691_g17899_i0 PRJNA561212 18110 267 1.489691 3.97747497 Zebrafish picornavirus 1 2304617 Viruses Viruses 335 2.169999999999999e-87   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g17899 i0 90.837 1.88014981273408 251 22 94 1 10 259 3141 2891 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 502 335 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
12024438 12024438 PRJNA561212_P_NODE_18230_length_266_cov_1.528497_g18019_i0 PRJNA561212 18230 266 1.528497 4.06580202 Mitovirus sp. 2587224 Viruses Viruses 270 6.1699999999999986e-68   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g18019 i0 92.553 0.706766917293233 188 14 71 0 9 196 9 196 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 188 270 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
14574200 14574200 PRJNA561212_P_NODE_10392_length_342_cov_2.193309_g10181_i0 PRJNA561212 10392 342 2.193309 7.50111678 brine shrimp yue-like virus 7 2900459 Viruses Viruses 616 9.139999999999999e-172   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g10181 i0 100 4.86842105263158 333 0 97 0 1 333 1079 1411 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 1665 616 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
14574253 14574253 PRJNA561212_P_NODE_1312_length_944_cov_2.814007_g1146_i0 PRJNA561212 1312 944 2.814007 26.56422608 brine shrimp yue-like virus 7 2900459 Viruses Viruses 1729 0   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g1146 i0 100 4.98940677966102 936 0 99 0 1 936 993 58 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 4710 1729 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
14574454 14574454 PRJNA561212_P_NODE_24692_length_244_cov_1.011696_g24481_i0 PRJNA561212 24692 244 1.011696 2.46853824 brine shrimp yue-like virus 7 2900459 Viruses Viruses 403 5.27e-108   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g24481 i0 97.458 4.83606557377049 236 6 97 0 9 244 6545 6310 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1180 403 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
14574533 14574533 PRJNA561212_P_NODE_5852_length_457_cov_0.765625_g5641_i0 PRJNA561212 5852 457 0.765625 3.49890625 Artemvirus bsafialis 3426459 Viruses Viruses 793 0   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g5641 i0 99.093 14.4748358862144 441 4 96 0 8 448 6501 6061 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 6615 793 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
17123099 17123099 PRJNA561212_P_NODE_21674_length_250_cov_1.124294_g21463_i0 PRJNA561212 21674 250 1.124294 2.810735 Lentivirus simimdef 3418654 Viruses Viruses 58.4 4.87e-4   NTclustered gi|837765163|gb|KR999796.1| 11723 g21463 i0 100 0.124 31 0 12 0 24 54 303 273 Simian immunodeficiency virus isolate ViralSwarm09_77 envelope glycoprotein gene, partial cds blastn 31 58.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus simimdef
17123131 17123131 PRJNA561212_P_NODE_23534_length_246_cov_5.393064_g23323_i0 PRJNA561212 23534 246 5.393064 13.26693744 Zebrafish picornavirus 1 2304617 Viruses Viruses 313 9.23e-81   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g23323 i0 91.342 2.81707317073171 231 17 93 1 10 237 3129 3359 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 693 313 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
18397359 18397359 PRJNA561212_P_NODE_24955_length_244_cov_0.912281_g24744_i0 PRJNA561212 24955 244 0.912281 2.22596564 Caudoviricetes sp. 2832643 Viruses Viruses 152 2.11e-32   NTclustered gi|2914914457|gb|OR221253.1| 2832643 g24744 i0 91.892 0.631147540983607 111 6 45 2 124 232 11486 11595 MAG: Caudoviricetes sp. isolate MSP1863 genomic sequence blastn 154 152 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18397433 18397433 PRJNA561212_P_NODE_6275_length_440_cov_1.318801_g6064_i0 PRJNA561212 6275 440 1.318801 5.8027244 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.043   NTclustered gi|2058137948|tpg|BK034235.1| 2832643 g6064 i0 100 0.0636363636363636 28 0 6 0 182 209 639 612 MAG TPA_asm: Caudoviricetes sp. isolate ctOSj17, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19671863 19671863 PRJNA561212_P_NODE_18156_length_267_cov_1.128866_g17945_i0 PRJNA561212 18156 267 1.128866 3.01407222 Artemvirus bsafialis 3426459 Viruses Viruses 449 7.410000000000001e-122   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g17945 i0 99.593 13.8202247191011 246 1 92 0 10 255 1553 1798 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 3690 449 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
19671941 19671941 PRJNA561212_P_NODE_22796_length_248_cov_0.891429_g22585_i0 PRJNA561212 22796 248 0.891429 2.21074392 brine shrimp yue-like virus 7 2900459 Viruses Viruses 431 2.47e-116   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g22585 i0 100 4.69758064516129 233 0 94 0 9 241 6709 6477 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1165 431 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
19672052 19672052 PRJNA561212_P_NODE_7176_length_410_cov_3.824926_g6965_i0 PRJNA561212 7176 410 3.824926 15.6821966 brine shrimp yue-like virus 7 2900459 Viruses Viruses 734 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g6965 i0 99.751 4.89024390243902 401 0 98 1 10 410 7452 7851 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 2005 734 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
20947406 20947406 PRJNA561212_P_NODE_12077_length_320_cov_0.910931_g11866_i0 PRJNA561212 12077 320 0.910931 2.9149792 Artemvirus bsafialis 3426459 Viruses Viruses 525 1.4699999999999994e-144   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g11866 i0 97.712 14.34375 306 6 95 1 10 314 624 319 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 4590 525 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
20947713 20947713 PRJNA561212_P_NODE_797_length_1172_cov_22636.337580_g676_i0 PRJNA561212 797 1172 22636.33758 265297.8764376 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.96e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i0 85.714 0.955631399317406 91 11 8 2 1058 1146 9119 9209 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
22222636 22222636 PRJNA561212_P_NODE_898_length_1121_cov_23521.990458_g676_i2 PRJNA561212 898 1121 23521.990458 263681.51303418 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.87e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i2 85.714 0.999107939339875 91 11 8 2 27 115 9209 9119 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
23497956 23497956 PRJNA561212_P_NODE_999_length_1062_cov_30112.421638_g676_i4 PRJNA561212 999 1062 30112.421638 319793.91779556 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.77e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i4 85.714 1.05461393596987 91 11 8 2 27 115 9209 9119 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1
24771483 24771483 PRJNA561212_P_NODE_1000_length_1062_cov_27694.141557_g676_i5 PRJNA561212 1000 1062 27694.141557 294111.78333534 Arma chinensis virus 1 2974718 Viruses Viruses 95.3 1.77e-14   NTclustered gi|2289441063|gb|MW846634.1| 2974718 g676 i5 85.714 1.05461393596987 91 11 8 2 27 115 9209 9119 Arma chinensis virus 1 isolate GZ1, complete genome blastn 1120 95.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Arma chinensis virus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;