RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA561212 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1821211 1821211 PRJNA561212_P_NODE_6242_length_441_cov_1.907609_g6031_i0 PRJNA561212 6242 441 1.907609 8.41255569 Linderina pennispora 61395 Fungi Fungi 350 1.3500000000000001e-91   NTclustered gi|2028316258|ref|XM_040883092.1| 61395 g6031 i0 87.097 61.2721088435374 310 39 70 1 25 334 542 234 Linderina pennispora putative 40S ribosomal protein RPS20 (DL89DRAFT_110176), mRNA blastn 27021 350 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
14574258 14574258 PRJNA561212_P_NODE_13312_length_306_cov_1.360515_g13101_i0 PRJNA561212 13312 306 1.360515 4.1631759 Linderina pennispora 61395 Fungi Fungi 291 5.56e-74   NTclustered gi|2028312660|ref|XM_040889104.1| 61395 g13101 i0 85.172 18.4542483660131 290 35 93 8 10 295 745 460 Linderina pennispora uncharacterized protein (DL89DRAFT_273771), partial mRNA blastn 5647 291 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
16433376 16433376 PRJNA561212_P_NODE_12273_length_317_cov_1.668033_g12062_i0 PRJNA561212 12273 317 1.668033 5.28766461 Eukaryota 2759 Fungi Fungi 254 7.58e-63   NTclustered gi|2028321822|ref|XM_040887850.1| 61395 g12062 i0 87.054 63.006309148265 224 29 71 0 84 307 460 683 Linderina pennispora peptidyl-prolyl cis-trans isomerase A1 (DL89DRAFT_268255), mRNA blastn 19973 254 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
18397376 18397376 PRJNA561212_P_NODE_26275_length_233_cov_2.437500_g26064_i0 PRJNA561212 26275 233 2.4375 5.679375 Linderina pennispora 61395 Fungi Fungi 252 1.92e-62   NTclustered gi|2028316368|ref|XM_040886859.1| 61395 g26064 i0 88.571 73.4291845493562 210 20 89 3 10 217 617 410 Linderina pennispora 60S ribosomal protein L27a (DL89DRAFT_265861), mRNA blastn 17109 252 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;