RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA561212 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1821116 1821116 PRJNA561212_P_NODE_23582_length_246_cov_1.670520_g23371_i0 PRJNA561212 23582 246 1.67052 4.1094792 Philodina citrina 468664 Rotifera other_Eukaryota 206 1.61e-48   NTclustered gi|407227484|emb|FR856884.1| 468664 g23371 i0 83.544 3.18292682926829 237 22 93 14 10 238 1993 1766 Philodina citrina complete mitochondrial genome blastn 783 206 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
1821139 1821139 PRJNA561212_P_NODE_25702_length_242_cov_1.378698_g25491_i0 PRJNA561212 25702 242 1.378698 3.33644916 Philodina citrina 468664 Rotifera other_Eukaryota 261 3.33e-65   NTclustered gi|407227484|emb|FR856884.1| 468664 g25491 i0 87.892 5.09917355371901 223 25 92 2 7 228 2389 2168 Philodina citrina complete mitochondrial genome blastn 1234 261 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
3096239 3096239 PRJNA561212_P_NODE_13463_length_305_cov_0.961207_g13252_i0 PRJNA561212 13463 305 0.961207 2.93168135 Lecane bulla 96446 Rotifera other_Eukaryota 324 5.4599999999999995e-84   NTclustered gi|1800242915|gb|MN983090.1| 96446 g13252 i0 86.441 96.6885245901639 295 40 97 0 1 295 168 462 Lecane bulla isolate LbullaMAG306 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 29490 324 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
3682007 3682007 PRJNA561212_P_NODE_18903_length_261_cov_8.808511_g18692_i0 PRJNA561212 18903 261 8.808511 22.99021371 Lecane 96445 Rotifera other_Eukaryota 446 9.339999999999999e-121   NTclustered gi|1845957832|gb|MT522656.1| 1213210 g18692 i0 99.59 93.4521072796935 244 1 93 0 9 252 612 855 Lecane ludwigii isolate JH_005J07 small subunit ribosomal RNA gene, partial sequence blastn 24391 446 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane ludwigii
4373005 4373005 PRJNA561212_P_NODE_7644_length_397_cov_1.283951_g7433_i0 PRJNA561212 7644 397 1.283951 5.09728547 Brachionus rubens 392764 Rotifera other_Eukaryota 387 9.17e-103   NTclustered gi|632795131|gb|KJ489418.1| 392764 g7433 i0 86.571 80.6272040302267 350 47 88 0 9 358 1359 1010 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 32009 387 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
4958815 4958815 PRJNA561212_P_NODE_2804_length_658_cov_3.006838_g2599_i0 PRJNA561212 2804 658 3.006838 19.78499404 Eurotatoria 2816136 Rotifera other_Eukaryota 1096 0   NTclustered gi|72153762|gb|DQ089743.1| 231624 g2599 i0 97.368 41.2370820668693 646 13 98 3 8 649 1534 2179 Rotaria rotatoria 28S ribosomal RNA gene, partial sequence blastn 27134 1107 0.990063233965673 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
15848126 15848126 PRJNA561212_P_NODE_12913_length_310_cov_1.628692_g12702_i0 PRJNA561212 12913 310 1.628692 5.0489452 Philodina citrina 468664 Rotifera other_Eukaryota 366 9.11e-97   NTclustered gi|407227484|emb|FR856884.1| 468664 g12702 i0 90.391 54.0064516129032 281 23 90 4 10 288 2153 1875 Philodina citrina complete mitochondrial genome blastn 16742 366 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
17122936 17122936 PRJNA561212_P_NODE_11134_length_332_cov_1.212355_g10923_i0 PRJNA561212 11134 332 1.212355 4.0250186 Notommata allantois 360683 Rotifera other_Eukaryota 374 5.879999999999999e-99   NTclustered gi|1845941366|gb|MT521622.1| 360683 g10923 i0 88.254 93.2259036144578 315 34 94 3 10 322 48 361 Notommata allantois voucher AZF8_NA2 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 30951 374 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Notommata Notommata allantois
17708641 17708641 PRJNA561212_P_NODE_13554_length_303_cov_4.056522_g13343_i0 PRJNA561212 13554 303 4.056522 12.29126166 Metazoa 33208 Rotifera other_Eukaryota 520 6.439999999999999e-143   NTclustered gi|37785582|gb|AY210469.1| 96448 g13343 i0 99.649 52.016501650165 285 0 94 1 10 294 1813 1530 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 15761 521 0.998080614203455 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
18397361 18397361 PRJNA561212_P_NODE_25015_length_244_cov_0.906433_g24804_i0 PRJNA561212 25015 244 0.906433 2.21169652 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 204 5.74e-48   NTclustered gi|402761847|gb|JX184055.1| 104788 g24804 i0 83.408 4.54508196721311 223 34 91 3 11 231 342 563 Macrotrachela quadricornifera isolate LH NADH dehydrogenase subunit 4 (ND4) gene, partial cds; mitochondrial blastn 1109 204 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
24771786 24771786 PRJNA561212_P_NODE_6280_length_440_cov_0.929155_g6069_i0 PRJNA561212 6280 440 0.929155 4.088282 Adineta vaga 104782 Rotifera other_Eukaryota 715 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g6069 i0 97.826 4.64772727272727 414 9 94 0 10 423 9985 10398 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 2045 715 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;