RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA561212 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2406093 2406093 PRJNA561212_P_NODE_17302_length_273_cov_1.165000_g17091_i0 PRJNA561212 17302 273 1.165 3.18045 Metazoa 33208 Mollusca Mollusca 54.7 0.007   NTclustered gi|1207907783|ref|XM_021503088.1| 6573 g17091 i0 92.308 1.3003663003663 39 1 14 1 86 124 5801 5837 PREDICTED: Mizuhopecten yessoensis centrosomal protein of 131 kDa-like (LOC110453882), mRNA blastn 355 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
3096410 3096410 PRJNA561212_P_NODE_2543_length_688_cov_1.891057_g2339_i0 PRJNA561212 2543 688 1.891057 13.01047216 Pecten maximus 6579 Mollusca Mollusca 54.7 0.019   NTclustered gi|1835503412|ref|XM_033884798.1| 6579 g2339 i0 96.875 0.0465116279069767 32 1 5 0 233 264 3046 3015 PREDICTED: Pecten maximus proteoglycan 4-like (LOC117327689), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
6923410 6923410 PRJNA561212_P_NODE_19906_length_254_cov_2.005525_g19695_i0 PRJNA561212 19906 254 2.005525 5.0940335 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g19695 i0 100 1.87795275590551 29 0 11 0 131 159 35434615 35434587 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 477 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
6923558 6923558 PRJNA561212_P_NODE_5046_length_492_cov_3.682578_g4835_i0 PRJNA561212 5046 492 3.682578 18.11828376 Mytilus edulis 6550 Mollusca Mollusca 340 9.15e-89   NTclustered gi|2912438933|ref|XM_071270510.1| 6550 g4835 i0 82.294 72.0121951219512 401 64 80 7 85 480 1619 1221 PREDICTED: Mytilus edulis tubulin beta-4B chain-like (LOC139485864), transcript variant X1, mRNA blastn 35430 340 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
6923588 6923588 PRJNA561212_P_NODE_7106_length_412_cov_2.398230_g6895_i0 PRJNA561212 7106 412 2.39823 9.8807076 Bradybaena similaris 145626 Mollusca Mollusca 60.2 2.37e-4   NTclustered gi|2913001038|dbj|AP039608.1| 145626 g6895 i0 92.683 0.0995145631067961 41 3 10 0 78 118 13871606 13871566 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 27, sequence blastn 41 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
8198313 8198313 PRJNA561212_P_NODE_2187_length_737_cov_2.640060_g1991_i0 PRJNA561212 2187 737 2.64006 19.4572422 Pecten maximus 6579 Mollusca Mollusca 71.3 2.04e-7   NTclustered gi|1835473492|ref|XM_033869187.1| 6579 g1991 i0 87.097 0.175033921302578 62 8 8 0 374 435 442 503 PREDICTED: Pecten maximus cathepsin L1-like (LOC117315052), mRNA blastn 129 71.3 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
14574233 14574233 PRJNA561212_P_NODE_12172_length_319_cov_0.865854_g11961_i0 PRJNA561212 12172 319 0.865854 2.76207426 Mya arenaria 6604 Mollusca Mollusca 289 2.09e-73   NTclustered gi|2427460903|ref|XM_052938019.1| 6604 g11961 i0 83.495 96.2601880877743 309 51 97 0 11 319 686 994 PREDICTED: Mya arenaria tubulin beta chain (LOC128227458), transcript variant X1, mRNA blastn 30707 289 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
15848344 15848344 PRJNA561212_P_NODE_2593_length_681_cov_2.064145_g2389_i0 PRJNA561212 2593 681 2.064145 14.05682745 Liolophura japonica 13599 Mollusca Mollusca 54.7 0.019   NTclustered gi|2724241218|ref|XM_064745838.1| 13599 g2389 i0 100 0.0425844346549192 29 0 4 0 469 497 2077 2049 PREDICTED: Liolophura japonica ubiquitin carboxyl-terminal hydrolase MINDY-2-like (LOC135467913), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
17123135 17123135 PRJNA561212_P_NODE_23654_length_246_cov_1.248555_g23443_i0 PRJNA561212 23654 246 1.248555 3.0714453 Dreissena polymorpha 45954 Mollusca Mollusca 67.6 7.94e-7   NTclustered gi|2364268467|ref|XM_052408548.1| 45954 g23443 i0 82.667 1.92682926829268 75 13 30 0 137 211 2225 2299 PREDICTED: Dreissena polymorpha uncharacterized LOC127867416 (LOC127867416), mRNA blastn 474 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
18397130 18397130 PRJNA561212_P_NODE_11275_length_330_cov_1.143969_g11064_i0 PRJNA561212 11275 330 1.143969 3.7750977 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.031   NTclustered gi|2912993551|dbj|AP039598.1| 145626 g11064 i0 100 0.0848484848484849 28 0 8 0 176 203 13152250 13152277 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 17, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
22222384 22222384 PRJNA561212_P_NODE_15978_length_283_cov_0.923810_g15767_i0 PRJNA561212 15978 283 0.92381 2.6143823 Mya arenaria 6604 Mollusca Mollusca 54.7 0.007   NTclustered gi|2427425130|ref|XM_052930172.1| 6604 g15767 i0 100 0.204946996466431 29 0 10 0 77 105 123 95 PREDICTED: Mya arenaria prostatic spermine-binding protein-like (LOC128221567), partial mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
22222513 22222513 PRJNA561212_P_NODE_25758_length_242_cov_0.923077_g25547_i0 PRJNA561212 25758 242 0.923077 2.23384634 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.022   NTclustered gi|2912999222|dbj|AP039605.1| 145626 g25547 i0 100 0.115702479338843 28 0 12 0 204 231 32725599 32725626 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 24, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
24771540 24771540 PRJNA561212_P_NODE_13260_length_307_cov_0.846154_g13049_i0 PRJNA561212 13260 307 0.846154 2.59769278 Mytilus edulis 6550 Mollusca Mollusca 54.7 0.008   NTclustered gi|2912312928|ref|XM_071281426.1| 6550 g13049 i0 100 0.0944625407166124 29 0 9 0 148 176 767 739 PREDICTED: Mytilus edulis uncharacterized protein (LOC139493193), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis
24771546 24771546 PRJNA561212_P_NODE_13840_length_300_cov_5.594714_g13629_i0 PRJNA561212 13840 300 5.594714 16.784142 Aplysia californica 6500 Mollusca Mollusca 52.8 0.028   NTclustered gi|1897936549|ref|XM_005106389.3| 6500 g13629 i0 100 0.0933333333333333 28 0 9 0 66 93 3646 3673 PREDICTED: Aplysia californica RRP12-like protein (LOC101856684), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;