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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA561212 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1130764 1130764 PRJNA561212_P_NODE_3161_length_619_cov_1.650183_g2956_i0 PRJNA561212 3161 619 1.650183 10.21463277 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 1094 0   NTclustered gi|29170479|emb|AJ224890.2| 166958 g2956 i0 99.501 61.7657512116317 601 3 97 0 10 610 1171 1771 Paravahlkampfia ustiana SSU rRNA gene, strain CCAP 1588/6 blastn 38233 1105 0.990045248868778 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
1821156 1821156 PRJNA561212_P_NODE_2922_length_646_cov_2.160558_g2717_i0 PRJNA561212 2922 646 2.160558 13.95720468 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 56.5 0.005   NTclustered gi|2119413729|ref|XM_044693100.1| 51637 g2717 i0 97.059 0.0526315789473684 34 0 5 1 434 467 5302 5334 Naegleria lovaniensis uncharacterized protein (C9374_003559), partial mRNA blastn 34 56.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
1821190 1821190 PRJNA561212_P_NODE_482_length_1434_cov_3.100661_g387_i0 PRJNA561212 482 1434 3.100661 44.46347874 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 939 0   NTclustered gi|2119449339|ref|XM_044698046.1| 51637 g387 i0 79.908 88.8012552301255 1309 239 90 23 101 1397 1297 1 Naegleria lovaniensis uncharacterized protein (C9374_008016), partial mRNA blastn 127341 939 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
2406116 2406116 PRJNA561212_P_NODE_7802_length_392_cov_3.253918_g7591_i0 PRJNA561212 7802 392 3.253918 12.75535856 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 691 0   NTclustered gi|1121487417|gb|KX068999.1| 166958 g7591 i0 100 64.8673469387755 374 0 95 0 10 383 22 395 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 25428 691 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
3096487 3096487 PRJNA561212_P_NODE_6843_length_421_cov_1.528736_g6632_i0 PRJNA561212 6843 421 1.528736 6.43597856 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 326 2.16e-84   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g6632 i0 87.241 49.5391923990499 290 31 68 6 122 407 2901 3188 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20856 326 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4372996 4372996 PRJNA561212_P_NODE_7304_length_406_cov_2.831832_g7093_i0 PRJNA561212 7304 406 2.831832 11.49723792 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 141 8.080000000000001e-29   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g7093 i0 87.603 28.8768472906404 121 15 30 0 26 146 4251 4131 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11724 141 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
5649322 5649322 PRJNA561212_P_NODE_4805_length_505_cov_2.240741_g4596_i0 PRJNA561212 4805 505 2.240741 11.31574205 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 58.4 0.001   NTclustered gi|290990671|ref|XM_002677914.1| 5762 g4596 i0 100 0.998019801980198 31 0 6 0 9 39 218 188 Naegleria gruberi ATP-dependent DNA ligase IV (NAEGRDRAFT_79495), partial mRNA blastn 504 58.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6923586 6923586 PRJNA561212_P_NODE_6986_length_416_cov_10.725948_g6775_i0 PRJNA561212 6986 416 10.725948 44.61994368 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 172 2.939999999999999e-38   NTclustered gi|2124390888|ref|XM_044710315.1| 5763 g6775 i0 80.786 3.34855769230769 229 36 54 8 102 326 284 60 Naegleria fowleri uncharacterized protein (FDP41_006657), partial mRNA blastn 1393 172 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
8198459 8198459 PRJNA561212_P_NODE_827_length_1154_cov_2.640148_g702_i0 PRJNA561212 827 1154 2.640148 30.46730792 Naegleria andersoni 5764 Heterolobosea other_Eukaryota 2093 0   NTclustered gi|2351569|gb|U80057.1|NAU80057 5764 g702 i0 99.737 93.0459272097054 1141 2 99 1 9 1149 733 1872 Naegleria andersoni 18S ribosomal RNA gene, partial sequence blastn 107375 2093 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria andersoni
8783605 8783605 PRJNA561212_P_NODE_11767_length_323_cov_1.604000_g11556_i0 PRJNA561212 11767 323 1.604 5.18092 Naegleria 5761 Heterolobosea other_Eukaryota 497 3.2399999999999993e-136   NTclustered gi|2618963742|gb|OR769034.1| 5762 g11556 i0 96.066 9.85448916408669 305 12 94 0 10 314 5442 5746 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3183 497 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9474053 9474053 PRJNA561212_P_NODE_3488_length_590_cov_3.992263_g3282_i0 PRJNA561212 3488 590 3.992263 23.5543517 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 874 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g3282 i0 94.107 34.7559322033898 577 30 97 3 10 582 2955 2379 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20506 874 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10749663 10749663 PRJNA561212_P_NODE_18229_length_266_cov_1.528497_g18018_i0 PRJNA561212 18229 266 1.528497 4.06580202 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 374 4.569999999999999e-99   NTclustered gi|11466174|ref|NC_002573.1| 5762 g18018 i0 93.952 48.1654135338346 248 14 93 1 11 257 1542 1789 Naegleria gruberi mitochondrion, complete genome blastn 12812 374 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13299564 13299564 PRJNA561212_P_NODE_25851_length_242_cov_0.923077_g25640_i0 PRJNA561212 25851 242 0.923077 2.23384634 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 357 4.13e-94   NTclustered gi|290985314|ref|XM_002675325.1| 5762 g25640 i0 95.133 4.71900826446281 226 11 93 0 8 233 459 234 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80333), mRNA blastn 1142 357 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
14574305 14574305 PRJNA561212_P_NODE_1592_length_858_cov_2.715924_g1408_i0 PRJNA561212 1592 858 2.715924 23.30262792 Naegleria pringsheimi 234921 Heterolobosea other_Eukaryota 1277 0   NTclustered gi|2515557648|gb|OR045415.1| 234921 g1408 i0 94.279 23.5874125874126 839 40 98 7 12 849 5991 5160 Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 20238 1277 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pringsheimi
16433384 16433384 PRJNA561212_P_NODE_15993_length_282_cov_2.368421_g15782_i0 PRJNA561212 15993 282 2.368421 6.67894722 Naegleria 5761 Heterolobosea other_Eukaryota 477 3.6199999999999986e-130   NTclustered gi|2618963742|gb|OR769034.1| 5762 g15782 i0 99.242 621.843971631206 264 2 94 0 10 273 5026 5289 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 175360 477 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20257201 20257201 PRJNA561212_P_NODE_10736_length_337_cov_8.287879_g10525_i0 PRJNA561212 10736 337 8.287879 27.93015223 Naegleria 5761 Heterolobosea other_Eukaryota 577 4.2399999999999996e-160   NTclustered gi|2651357780|gb|PP174296.1| 36333 g10525 i0 99.065 71.0593471810089 321 3 95 0 9 329 2766 2446 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23947 582 0.991408934707904 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
20947403 20947403 PRJNA561212_P_NODE_12017_length_320_cov_2.040486_g11806_i0 PRJNA561212 12017 320 2.040486 6.5295552 Paravahlkampfia ustiana 166958 Heterolobosea other_Eukaryota 553 6.749999999999998e-153   NTclustered gi|1121487417|gb|KX068999.1| 166958 g11806 i0 99.346 69.88125 306 0 95 1 9 312 867 1172 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 22362 553 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
22222492 22222492 PRJNA561212_P_NODE_23778_length_246_cov_0.901734_g23567_i0 PRJNA561212 23778 246 0.901734 2.21826564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 287 5.599999999999999e-73   NTclustered gi|290988533|ref|XM_002676912.1| 5762 g23567 i0 88.889 4.52032520325203 234 24 95 2 8 240 1693 1461 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55285), mRNA blastn 1112 287 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24082621 24082621 PRJNA561212_P_NODE_11559_length_326_cov_1.403162_g11348_i0 PRJNA561212 11559 326 1.403162 4.57430812 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 566 8.849999999999997e-157   NTclustered gi|1121487417|gb|KX068999.1| 166958 g11348 i0 99.359 41.5613496932515 312 2 96 0 10 321 797 486 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 13549 566 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;