RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA561212 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11333835 11333835 PRJNA561212_P_NODE_24629_length_244_cov_1.321637_g24418_i0 PRJNA561212 24629 244 1.321637 3.22479428 Rhynchomonas 127149 Euglenozoa other_Eukaryota 418 1.8799999999999994e-112   NTclustered gi|77994660|gb|DQ207598.1| 127150 g24418 i0 100 79.1434426229508 226 0 93 0 10 235 239 14 Rhynchomonas nasuta strain HFCC319 18S ribosomal RNA gene, partial sequence blastn 19311 418 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
15158759 15158759 PRJNA561212_P_NODE_5432_length_474_cov_1.618454_g5221_i0 PRJNA561212 5432 474 1.618454 7.67147196 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 148 5.72e-31   NTclustered gi|2414483|emb|Y00055.1| 5656 g5221 i0 86.567 39.7869198312236 134 18 28 0 100 233 8204 8071 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 18859 148 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
20947463 20947463 PRJNA561212_P_NODE_16017_length_282_cov_1.574163_g15806_i0 PRJNA561212 16017 282 1.574163 4.43913966 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 479 1.01e-130   NTclustered gi|1996609220|gb|MW694339.1| 127150 g15806 i0 99.248 82.8758865248227 266 1 94 1 8 273 1230 966 Rhynchomonas nasuta isolate G431 small subunit ribosomal RNA gene, partial sequence blastn 23371 479 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
20947720 20947720 PRJNA561212_P_NODE_8477_length_377_cov_1.901316_g8266_i0 PRJNA561212 8477 377 1.901316 7.16796132 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 553 8.069999999999998e-153   NTclustered gi|41400287|gb|AY425023.1| 127150 g8266 i0 97.523 91.1777188328912 323 8 86 0 10 332 1541 1863 Rhynchomonas nasuta strain ATCC 50105 18S ribosomal RNA gene, partial sequence blastn 34374 553 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;