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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA561212 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
545406 545406 PRJNA561212_P_NODE_24781_length_244_cov_0.912281_g24570_i0 PRJNA561212 24781 244 0.912281 2.22596564 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 274 4.31e-69   NTclustered gi|33946346|gb|AY294152.1| 242541 g24570 i0 88.261 85.6434426229508 230 25 94 2 10 238 758 530 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 20897 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
1821002 1821002 PRJNA561212_P_NODE_16762_length_277_cov_1.117647_g16551_i0 PRJNA561212 16762 277 1.117647 3.09588219 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 206 1.85e-48   NTclustered gi|470490984|ref|XM_004345790.1| 1257118 g16551 i0 82.278 87.7111913357401 237 42 86 0 25 261 237 1 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_181970), partial mRNA blastn 24296 206 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4372948 4372948 PRJNA561212_P_NODE_484_length_1433_cov_17.276471_g389_i0 PRJNA561212 484 1433 17.276471 247.57182943 Paramoeba branchiphila 308475 Discosea other_Eukaryota 809 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g389 i0 78.886 87.7997208653175 1203 246 84 7 182 1380 1200 2 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 125817 809 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
5649309 5649309 PRJNA561212_P_NODE_3945_length_557_cov_5.688017_g3738_i0 PRJNA561212 3945 557 5.688017 31.68225469 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 512 2.09e-140   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g3738 i0 84.079 63.7396768402154 559 60 97 23 10 548 56 605 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 35503 512 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
5649408 5649408 PRJNA561212_P_NODE_9605_length_355_cov_3.237589_g9394_i0 PRJNA561212 9605 355 3.237589 11.49344095 Vannella sp. ACN1 1215628 Discosea other_Eukaryota 608 1.589999999999999e-169   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g9394 i0 99.112 83.3408450704225 338 3 95 0 10 347 1890 1553 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 29586 608 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
8198377 8198377 PRJNA561212_P_NODE_26467_length_201_cov_4.710938_g26256_i0 PRJNA561212 26467 201 4.710938 9.46898538 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 246 7.47e-61   NTclustered gi|470512968|ref|XM_004352512.1| 1257118 g26256 i0 88.945 89.8009950248756 199 22 99 0 1 199 199 1 Acanthamoeba castellanii str. Neff actin-1, putative (ACA1_361250), partial mRNA blastn 18050 246 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10749536 10749536 PRJNA561212_P_NODE_10049_length_348_cov_1.570909_g9838_i0 PRJNA561212 10049 348 1.5709090000000001 5.46676332 Stenamoeba amazonica 746910 Discosea other_Eukaryota 610 4.34e-170   NTclustered gi|2806326578|gb|PQ345828.1| 746910 g9838 i0 100 75.4022988505747 330 0 95 0 10 339 428 99 Stenamoeba amazonica isolate 7FSb3 small subunit ribosomal RNA gene, partial sequence blastn 26240 610 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
13299293 13299293 PRJNA561212_P_NODE_10071_length_348_cov_0.901818_g9860_i0 PRJNA561212 10071 348 0.901818 3.13832664 Ripella tribonemae 2047823 Discosea other_Eukaryota 503 7.57e-138   NTclustered gi|1269228474|gb|MF683599.1| 2047823 g9860 i0 94.277 83.3764367816092 332 13 95 4 10 341 969 644 Ripella tribonemae clone 22.9.5 18S ribosomal RNA gene, partial sequence blastn 29015 503 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
13299610 13299610 PRJNA561212_P_NODE_5451_length_473_cov_2.010000_g5240_i0 PRJNA561212 5451 473 2.01 9.5073 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 479 1.7799999999999994e-130   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g5240 i0 87.239 99.2283298097252 431 41 89 7 10 428 33619 33191 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 46935 479 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
17123175 17123175 PRJNA561212_P_NODE_26414_length_225_cov_4.664474_g26203_i0 PRJNA561212 26414 225 4.664474 10.4950665 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 95.3 3.28e-15   NTclustered gi|470519749|ref|XM_004353447.1| 1257118 g26203 i0 91.304 0.982222222222222 69 6 31 0 67 135 156 88 Acanthamoeba castellanii str. Neff ribosomal L29e protein family (ACA1_143310), partial mRNA blastn 221 95.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18397310 18397310 PRJNA561212_P_NODE_22055_length_249_cov_1.954545_g21844_i0 PRJNA561212 22055 249 1.954545 4.86681705 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 388 1.51e-103   NTclustered gi|861553759|gb|KP719186.1| 1678066 g21844 i0 96.983 58.6586345381526 232 5 93 2 10 240 355 125 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 14606 388 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
22222414 22222414 PRJNA561212_P_NODE_17818_length_269_cov_1.500000_g17607_i0 PRJNA561212 17818 269 1.5 4.035 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 176 1.4e-39   NTclustered gi|470519083|ref|XM_004353374.1| 1257118 g17607 i0 81.905 5.35687732342007 210 36 78 2 50 258 25 233 Acanthamoeba castellanii str. Neff actinrelated protein 2, putative (ACA1_074650), partial mRNA blastn 1441 176 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24771840 24771840 PRJNA561212_P_NODE_9840_length_352_cov_0.946237_g9629_i0 PRJNA561212 9840 352 0.946237 3.33075424 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 364 3.7599999999999985e-96   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g9629 i0 86.85 70.7215909090909 327 41 93 2 18 343 1280 955 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 24894 364 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;