RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA561212 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
545473 545473 PRJNA561212_P_NODE_4821_length_504_cov_1.645012_g4611_i0 PRJNA561212 4821 504 1.645012 8.29086048 Anemonia sulcata 6108 Cnidaria other_Eukaryota 62.1 8.19e-5   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g4611 i0 89.583 2.38095238095238 48 5 10 0 301 348 1088025 1087978 Anemonia sulcata genome assembly, chromosome: 9 blastn 1200 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
3682015 3682015 PRJNA561212_P_NODE_22423_length_249_cov_0.886364_g22212_i0 PRJNA561212 22423 249 0.886364 2.20704636 Sertularella 308611 Cnidaria other_Eukaryota 93.5 1.33e-14   NTclustered gi|256674532|gb|FJ550436.1| 662004 g22212 i0 85.714 37.0200803212851 91 9 36 4 152 240 794 706 Sertularella gayi voucher MHNG INVE36302 28S ribosomal RNA gene, partial sequence blastn 9218 93.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Sertulariidae Sertularella Sertularella gayi
6234282 6234282 PRJNA561212_P_NODE_5905_length_454_cov_1.304462_g5694_i0 PRJNA561212 5905 454 1.304462 5.92225748 root 1 Root_unresolved Root_unresolved 93.5 2.59e-14   NTclustered gi|157144281|ref|NC_009797.1| 46731 g5694 i0 91.176 14.874449339207 68 6 15 0 134 201 622 555 Pocillopora damicornis mitochondrion, complete genome blastn 6753 93.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
17708665 17708665 PRJNA561212_P_NODE_434_length_1487_cov_6.421499_g346_i0 PRJNA561212 434 1487 6.421499 95.48769013 Metazoa 33208 Cnidaria other_Eukaryota 60.2 0.001   NTclustered gi|2918369553|emb|OZ237725.1| 317547 g346 i0 94.737 0.519838601210491 38 2 3 0 1035 1072 12602228 12602265 Eunicella cavolini genome assembly, chromosome: 9 blastn 773 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;