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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA561212 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1130737 1130737 PRJNA561212_P_NODE_1301_length_947_cov_15.881007_g1136_i0 PRJNA561212 1301 947 15.881007 150.39313629 Allomyces 28581 Fungi Fungi 1543 0   NTclustered gi|362410325|gb|JN941230.1| 28583 g1136 i0 99.297 63.6409714889124 854 5 90 1 63 916 1 853 Allomyces macrogynus strain WT Burma 3-35 28S ribosomal RNA (LSU) gene, partial sequence blastn 60268 1543 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
1821148 1821148 PRJNA561212_P_NODE_26162_length_239_cov_8.530120_g25951_i0 PRJNA561212 26162 239 8.53012 20.3869868 Allomyces macrogynus 28583 Fungi Fungi 411 3.079999999999999e-110   NTclustered gi|11467573|ref|NC_001715.1| 28583 g25951 i0 99.556 2.35564853556485 225 1 94 0 10 234 310 86 Allomyces macrogynus mitochondrion, complete genome blastn 563 411 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
4372979 4372979 PRJNA561212_P_NODE_6524_length_431_cov_161.075419_g6313_i0 PRJNA561212 6524 431 161.075419 694.23505589 Blastocladiella emersonii 4808 Fungi Fungi 279 1.7500000000000002e-70   NTclustered gi|2440036|emb|X90411.1| 4808 g6313 i0 94.054 45.707656612529 185 9 43 2 10 194 3194 3376 B.emersonii DNA for 28S ribosomal RNA gene blastn 19700 279 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
5649360 5649360 PRJNA561212_P_NODE_685_length_1238_cov_16.476395_g572_i0 PRJNA561212 685 1238 16.476395 203.9777701 Blastocladiella emersonii 4808 Fungi Fungi 1018 0   NTclustered gi|209427640|ref|NC_011360.1| 4808 g572 i0 90.262 21.0129240710824 801 47 90 20 5 797 15511 14734 Blastocladiella emersonii mitochondrion, complete genome blastn 26014 1018 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
9473808 9473808 PRJNA561212_P_NODE_11428_length_328_cov_1.152941_g11217_i0 PRJNA561212 11428 328 1.152941 3.78164648 Blastocladiella emersonii 4808 Fungi Fungi 357 5.84e-94   NTclustered gi|117422543|gb|EF064248.1| 4808 g11217 i0 90.943 76.1067073170732 265 24 81 0 10 274 311 47 Blastocladiella emersonii beta-tubulin mRNA, complete cds blastn 24963 357 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
10749818 10749818 PRJNA561212_P_NODE_449_length_1470_cov_1.997137_g358_i0 PRJNA561212 449 1470 1.997137 29.3579139 Blastocladiella emersonii 4808 Fungi Fungi 1869 0   NTclustered gi|117422539|gb|EF064246.1| 4808 g358 i0 90.767 73.4387755102041 1408 118 95 10 51 1452 1473 72 Blastocladiella emersonii elongation factor alpha-like protein mRNA, complete cds blastn 107955 1869 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
10749891 10749891 PRJNA561212_P_NODE_8689_length_372_cov_19.852843_g8478_i0 PRJNA561212 8689 372 19.852843 73.85257596 Blastocladiella emersonii 4808 Fungi Fungi 298 4.12e-76   NTclustered gi|2440036|emb|X90411.1| 4808 g8478 i0 96.175 49.25 183 6 49 1 10 191 3199 3381 B.emersonii DNA for 28S ribosomal RNA gene blastn 18321 298 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
13299525 13299525 PRJNA561212_P_NODE_23531_length_246_cov_14.300578_g23320_i0 PRJNA561212 23531 246 14.300578 35.17942188 Allomyces arbusculus 64504 Fungi Fungi 412 8.85e-111   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g23320 i0 99.127 89.4308943089431 229 2 93 0 9 237 2693 2465 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 22000 412 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
13299579 13299579 PRJNA561212_P_NODE_3411_length_597_cov_18.729008_g3205_i0 PRJNA561212 3411 597 18.729008 111.81217776 Allomyces macrogynus 28583 Fungi Fungi 1048 0   NTclustered gi|11467573|ref|NC_001715.1| 28583 g3205 i0 99.31 12.787269681742 580 3 97 1 9 588 1546 2124 Allomyces macrogynus mitochondrion, complete genome blastn 7634 1048 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
13299666 13299666 PRJNA561212_P_NODE_8691_length_372_cov_11.936455_g8480_i0 PRJNA561212 8691 372 11.936455 44.4036126 Allomyces arbusculus 64504 Fungi Fungi 649 0   NTclustered gi|296035081|ref|NG_017166.1| 64504 g8480 i0 99.718 93.0860215053764 354 1 95 0 10 363 358 5 Allomyces arbusculus UCBMG Brazil 2 18S rRNA gene, partial sequence; from reference material blastn 34628 649 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
15848097 15848097 PRJNA561212_P_NODE_1133_length_1005_cov_8.577253_g978_i0 PRJNA561212 1133 1005 8.577253 86.20139265 Allomyces macrogynus 28583 Fungi Fungi 257 2.01e-63   NTclustered gi|11467573|ref|NC_001715.1| 28583 g978 i0 85.091 11.3054726368159 275 16 68 14 420 674 801 532 Allomyces macrogynus mitochondrion, complete genome blastn 11362 257 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
15848218 15848218 PRJNA561212_P_NODE_1773_length_814_cov_23.441296_g1585_i0 PRJNA561212 1773 814 23.441296 190.81214944 Allomyces arbusculus 64504 Fungi Fungi 1328 0   NTclustered gi|1405239019|ref|NG_027623.1| 64504 g1585 i0 96.415 85.8366093366093 809 22 99 5 1 806 1381 2185 Allomyces arbusculus UCBMG Brasil 2 28S rRNA gene, partial sequence; from reference material blastn 69871 1328 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
17123287 17123287 PRJNA561212_P_NODE_9074_length_365_cov_1.119863_g8863_i0 PRJNA561212 9074 365 1.119863 4.08749995 Allomyces arbusculus 64504 Fungi Fungi 603 7.629999999999998e-168   NTclustered gi|358030853|dbj|AB609160.1| 64504 g8863 i0 97.191 96.3698630136986 356 10 98 0 10 365 1287 1642 Allomyces arbusculus EF2 gene for translation elongation factor 2, partial cds, strain: BL002 blastn 35175 603 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
18397436 18397436 PRJNA561212_P_NODE_6455_length_433_cov_78.877778_g6244_i0 PRJNA561212 6455 433 78.877778 341.54077874 Catenophlyctis variabilis 945688 Fungi Fungi 763 0   NTclustered gi|82398236|gb|DQ273780.1| 945688 g6244 i0 99.76 99.2263279445727 416 1 96 0 9 424 2963 2548 Catenophlyctis sp. JEL298 isolate AFTOL-ID 36 28S ribosomal RNA gene, partial sequence blastn 42965 763 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenophlyctis Catenophlyctis variabilis
18982075 18982075 PRJNA561212_P_NODE_11095_length_332_cov_30.826255_g10884_i0 PRJNA561212 11095 332 30.826255 102.3431666 Catenariaceae 109872 Fungi Fungi 577 4.169999999999999e-160   NTclustered gi|321173723|gb|HQ888704.1| 109876 g10884 i0 100 87.6626506024096 312 0 94 0 12 323 346 35 Catenaria anguillulae strain BR105 18S ribosomal RNA gene, partial sequence blastn 29104 577 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
20257227 20257227 PRJNA561212_P_NODE_6456_length_433_cov_27.141667_g6245_i0 PRJNA561212 6456 433 27.141667 117.52341811 Allomyces 28581 Fungi Fungi 767 0   NTclustered gi|777407|gb|U23936.1|AMU23936 28583 g6245 i0 100 94.1039260969977 415 0 96 0 10 424 1191 777 Allomyces macrogynus small subunit ribosomal RNA (rns) gene, complete sequence blastn 40747 767 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
23497592 23497592 PRJNA561212_P_NODE_10519_length_341_cov_0.992537_g10308_i0 PRJNA561212 10519 341 0.992537 3.38455117 Blastocladiella emersonii 4808 Fungi Fungi 281 3.78e-71   NTclustered gi|111054102|gb|DQ787196.1| 4808 g10308 i0 82.857 93.5425219941349 315 52 92 2 18 331 2999 2686 Blastocladiella emersonii heat shock protein 90 kDa (hsp90) gene, complete cds blastn 31898 281 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;