contig_metadata
27 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 545376 | 545376 | PRJNA561212_P_NODE_23161_length_247_cov_0.896552_g22950_i0 | PRJNA561212 | 23161 | 247 | 0.896552 | 2.21448344 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 414 | 2.47e-111 | NTclustered | gi|2505675366|gb|CP118829.1| | 1282 | g22950 | i0 | 99.13 | 93.1174089068826 | 230 | 2 | 93 | 0 | 10 | 239 | 242331 | 242102 | Staphylococcus epidermidis strain 7055 chromosome, complete genome | blastn | 23000 | 414 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 545414 | 545414 | PRJNA561212_P_NODE_25241_length_243_cov_0.917647_g25030_i0 | PRJNA561212 | 25241 | 243 | 0.917647 | 2.22988221 | Finegoldia magna | 1260 | Bacteria | Bacteria | 342 | 1.16e-89 | NTclustered | gi|1848608259|gb|CP054000.1| | 1260 | g25030 | i0 | 94.196 | 2.76543209876543 | 224 | 13 | 92 | 0 | 11 | 234 | 1833456 | 1833233 | Finegoldia magna strain FDAARGOS_764 chromosome, complete genome | blastn | 672 | 342 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 1821009 | 1821009 | PRJNA561212_P_NODE_17002_length_275_cov_1.306931_g16791_i0 | PRJNA561212 | 17002 | 275 | 1.306931 | 3.59406025 | Streptococcus salivarius | 1304 | Bacteria | Bacteria | 468 | 2.12e-127 | NTclustered | gi|2890261556|gb|CP177179.1| | 1304 | g16791 | i0 | 99.228 | 43.4509090909091 | 259 | 2 | 94 | 0 | 8 | 266 | 2066248 | 2066506 | Streptococcus salivarius strain MRD-NRLLH chromosome, complete genome | blastn | 11949 | 468 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 3096302 | 3096302 | PRJNA561212_P_NODE_18583_length_264_cov_1.010471_g18372_i0 | PRJNA561212 | 18583 | 264 | 1.010471 | 2.66764344 | Candidatus Paraimprobicoccus trichonymphae | 3033793 | Bacteria | Bacteria | 75 | 5.15e-9 | NTclustered | gi|2567583683|dbj|AP027925.1| | 3033793 | g18372 | i0 | 95.652 | 18.780303030303 | 46 | 2 | 17 | 0 | 10 | 55 | 640650 | 640605 | MAG: Candidatus Paraimprobicoccus trichonymphae RsTa-C01 DNA, complete genome | blastn | 4958 | 75 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Candidatus Paraimprobicoccus | Candidatus Paraimprobicoccus trichonymphae | ||||
| 3096335 | 3096335 | PRJNA561212_P_NODE_20963_length_252_cov_0.871508_g20752_i0 | PRJNA561212 | 20963 | 252 | 0.871508 | 2.19620016 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 433 | 6.98e-117 | NTclustered | gi|2482395019|gb|CP094927.1| | 1280 | g20752 | i0 | 99.17 | 138.706349206349 | 241 | 1 | 96 | 1 | 3 | 243 | 1841951 | 1842190 | Staphylococcus aureus strain 13 chromosome, complete genome | blastn | 34954 | 433 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 5649261 | 5649261 | PRJNA561212_P_NODE_24725_length_244_cov_0.912281_g24514_i0 | PRJNA561212 | 24725 | 244 | 0.912281 | 2.22596564 | Tepidibacillus marianensis | 3131995 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2707205938|gb|CP149939.1| | 3131995 | g24514 | i0 | 100 | 0.114754098360656 | 28 | 0 | 11 | 0 | 175 | 202 | 200260 | 200233 | Tepidibacillus marianensis strain LSZ-M11000 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Tepidibacillus | Tepidibacillus marianensis | ||
| 6923425 | 6923425 | PRJNA561212_P_NODE_21326_length_251_cov_0.876404_g21115_i0 | PRJNA561212 | 21326 | 251 | 0.876404 | 2.19977404 | Streptococcus gordonii | 1302 | Bacteria | Bacteria | 431 | 2.4999999999999996e-116 | NTclustered | gi|1348270962|gb|CP020450.2| | 1302 | g21115 | i0 | 100 | 11.0478087649402 | 233 | 0 | 93 | 0 | 10 | 242 | 1504989 | 1505221 | Streptococcus gordonii strain FDAARGOS_257 chromosome, complete genome | blastn | 2773 | 431 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus gordonii | ||
| 8198359 | 8198359 | PRJNA561212_P_NODE_25027_length_244_cov_0.883041_g24816_i0 | PRJNA561212 | 25027 | 244 | 0.883041 | 2.15462004 | Pediococcus argentinicus | 480391 | Bacteria | Bacteria | 407 | 4.08e-109 | NTclustered | gi|2754319441|gb|CP159610.1| | 480391 | g24816 | i0 | 99.115 | 0.926229508196721 | 226 | 2 | 93 | 0 | 10 | 235 | 21931 | 22156 | Pediococcus argentinicus strain z30 chromosome, complete genome | blastn | 226 | 407 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Pediococcus argentinicus | ||
| 8783621 | 8783621 | PRJNA561212_P_NODE_26247_length_235_cov_2.432099_g26036_i0 | PRJNA561212 | 26247 | 235 | 2.432099 | 5.71543265 | Streptococcus | 1301 | Bacteria | Bacteria | 401 | 1.8199999999999993e-107 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g26036 | i0 | 100 | 318.608510638298 | 217 | 0 | 92 | 0 | 10 | 226 | 1568782 | 1568998 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 74873 | 401 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 9473966 | 9473966 | PRJNA561212_P_NODE_21508_length_251_cov_0.876404_g21297_i0 | PRJNA561212 | 21508 | 251 | 0.876404 | 2.19977404 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 368 | 1.99e-97 | NTclustered | gi|927035354|gb|CP012646.1| | 28037 | g21297 | i0 | 94.894 | 93.5737051792829 | 235 | 12 | 94 | 0 | 9 | 243 | 938246 | 938480 | Streptococcus mitis strain KCOM 1350 (= ChDC B183), complete genome | blastn | 23487 | 368 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 10059240 | 10059240 | PRJNA561212_P_NODE_12888_length_311_cov_0.823529_g12677_i0 | PRJNA561212 | 12888 | 311 | 0.823529 | 2.56117519 | Streptococcus | 1301 | Bacteria | Bacteria | 527 | 3.9599999999999996e-145 | NTclustered | gi|2886512733|emb|OZ217346.1| | 28037 | g12677 | i0 | 98.983 | 313.022508038585 | 295 | 1 | 94 | 1 | 10 | 302 | 19167 | 18873 | Streptococcus mitis isolate S. mitis D22 genome assembly, chromosome: 1 | blastn | 97350 | 527 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 10059258 | 10059258 | PRJNA561212_P_NODE_24808_length_244_cov_0.912281_g24597_i0 | PRJNA561212 | 24808 | 244 | 0.912281 | 2.22596564 | Bacillus | 1386 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2168261830|gb|CP089530.1| | 1390 | g24597 | i0 | 100 | 11.8852459016393 | 29 | 0 | 12 | 0 | 191 | 219 | 1577757 | 1577729 | Bacillus amyloliquefaciens strain LS1-002-014s chromosome, complete genome | blastn | 2900 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus amyloliquefaciens | ||
| 11333827 | 11333827 | PRJNA561212_P_NODE_18569_length_264_cov_1.136126_g18358_i0 | PRJNA561212 | 18569 | 264 | 1.136126 | 2.99937264 | Streptococcus | 1301 | Bacteria | Bacteria | 60.2 | 1.44e-4 | NTclustered | gi|2170975497|dbj|AP025331.1| | 1917441 | g18358 | i0 | 100 | 0.685606060606061 | 32 | 0 | 12 | 0 | 13 | 44 | 724806 | 724837 | Streptococcus ruminantium GUT-183 DNA, complete genome | blastn | 181 | 60.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus ruminantium | ||
| 12609671 | 12609671 | PRJNA561212_P_NODE_19050_length_261_cov_0.941489_g18839_i0 | PRJNA561212 | 19050 | 261 | 0.941489 | 2.45728629 | Streptococcus | 1301 | Bacteria | Bacteria | 449 | 7.22e-122 | NTclustered | gi|2814310616|gb|CP065478.1| | 1308 | g18839 | i0 | 99.593 | 117.352490421456 | 246 | 1 | 94 | 0 | 7 | 252 | 134478 | 134723 | Streptococcus thermophilus strain 4134 chromosome, complete genome | blastn | 30629 | 453 | 0.991169977924945 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus | ||
| 13299492 | 13299492 | PRJNA561212_P_NODE_21871_length_250_cov_0.881356_g21660_i0 | PRJNA561212 | 21871 | 250 | 0.881356 | 2.20339 | uncultured Clostridia bacterium | 244328 | Bacteria | Bacteria | 357 | 4.28e-94 | NTclustered | gi|451917157|gb|KC451021.1| | 244328 | g21660 | i0 | 94.444 | 74.624 | 234 | 9 | 93 | 4 | 10 | 241 | 320 | 89 | Uncultured Clostridia bacterium clone RLBp5271 16S ribosomal RNA gene, partial sequence | blastn | 18656 | 357 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | uncultured Clostridia bacterium | |||||
| 13299511 | 13299511 | PRJNA561212_P_NODE_22811_length_248_cov_0.891429_g22600_i0 | PRJNA561212 | 22811 | 248 | 0.891429 | 2.21074392 | Acetoanaerobium sticklandii | 1511 | Bacteria | Bacteria | 355 | 1.53e-93 | NTclustered | gi|308824094|emb|FP565809.1| | 1511 | g22600 | i0 | 94.737 | 1.84677419354839 | 228 | 12 | 92 | 0 | 10 | 237 | 514401 | 514174 | Clostridium sticklandii str. DSM 519 chromosome, complete genome | blastn | 458 | 355 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Filifactoraceae | Acetoanaerobium | Acetoanaerobium sticklandii | ||
| 13884546 | 13884546 | PRJNA561212_P_NODE_17811_length_269_cov_1.510204_g17600_i0 | PRJNA561212 | 17811 | 269 | 1.510204 | 4.06244876 | Acetoanaerobium | 186831 | Bacteria | Bacteria | 309 | 1.32e-79 | NTclustered | gi|308824094|emb|FP565809.1| | 1511 | g17600 | i0 | 89.2 | 514.28624535316 | 250 | 24 | 93 | 3 | 12 | 261 | 16137 | 16383 | Clostridium sticklandii str. DSM 519 chromosome, complete genome | blastn | 138343 | 309 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Filifactoraceae | Acetoanaerobium | Acetoanaerobium sticklandii | ||
| 15158740 | 15158740 | PRJNA561212_P_NODE_19972_length_254_cov_1.276243_g19761_i0 | PRJNA561212 | 19972 | 254 | 1.276243 | 3.24165722 | Bacillales | 1385 | Bacteria | Bacteria | 431 | 2.539999999999999e-116 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g19761 | i0 | 99.163 | 497.137795275591 | 239 | 2 | 94 | 0 | 10 | 248 | 750201 | 749963 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 126273 | 433 | 0.995381062355658 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 15848312 | 15848312 | PRJNA561212_P_NODE_24193_length_245_cov_0.906977_g23982_i0 | PRJNA561212 | 24193 | 245 | 0.906977 | 2.22209365 | Acetoanaerobium noterae | 745369 | Bacteria | Bacteria | 241 | 4.400000000000001e-59 | NTclustered | gi|2727634373|gb|CP154629.1| | 745369 | g23982 | i0 | 86.425 | 0.902040816326531 | 221 | 28 | 90 | 2 | 18 | 237 | 2397540 | 2397321 | Acetoanaerobium noterae strain DSL2 chromosome, complete genome | blastn | 221 | 241 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Filifactoraceae | Acetoanaerobium | Acetoanaerobium noterae | ||
| 19671804 | 19671804 | PRJNA561212_P_NODE_14596_length_293_cov_2.072727_g14385_i0 | PRJNA561212 | 14596 | 293 | 2.072727 | 6.07309011 | uncultured Bacillota bacterium | 344338 | Bacteria | Bacteria | 141 | 5.64e-29 | NTclustered | gi|300089006|gb|GQ484294.1| | 344338 | g14385 | i0 | 89.908 | 79.839590443686 | 109 | 11 | 37 | 0 | 176 | 284 | 708 | 600 | Uncultured Firmicutes bacterium clone ITSButtonC10 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 23393 | 141 | 1 | Bacteria | Bacillati | Bacillota | uncultured Bacillota bacterium | ||||||
| 19671936 | 19671936 | PRJNA561212_P_NODE_22316_length_249_cov_0.886364_g22105_i0 | PRJNA561212 | 22316 | 249 | 0.886364 | 2.20704636 | Finegoldia magna | 1260 | Bacteria | Bacteria | 429 | 8.91e-116 | NTclustered | gi|2127667581|gb|CP085957.1| | 1260 | g22105 | i0 | 99.576 | 15.2409638554217 | 236 | 0 | 95 | 1 | 5 | 240 | 1271774 | 1271540 | Finegoldia magna strain FDAARGOS_1556 chromosome, complete genome | blastn | 3795 | 429 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 20947445 | 20947445 | PRJNA561212_P_NODE_14877_length_291_cov_1.316514_g14666_i0 | PRJNA561212 | 14877 | 291 | 1.316514 | 3.83105574 | Streptococcus oralis | 1303 | Bacteria | Bacteria | 459 | 1.36e-124 | NTclustered | gi|1948677368|gb|CP066059.1| | 1303 | g14666 | i0 | 96.727 | 90.9828178694158 | 275 | 9 | 95 | 0 | 10 | 284 | 528393 | 528119 | Streptococcus oralis strain FDAARGOS_1021 chromosome, complete genome | blastn | 26476 | 459 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 22807851 | 22807851 | PRJNA561212_P_NODE_7278_length_407_cov_1.320359_g7067_i0 | PRJNA561212 | 7278 | 407 | 1.320359 | 5.37386113 | Streptococcus | 1301 | Bacteria | Bacteria | 701 | 0 | NTclustered | gi|1948677368|gb|CP066059.1| | 1303 | g7067 | i0 | 98.734 | 328.125307125307 | 395 | 4 | 97 | 1 | 9 | 403 | 951677 | 951284 | Streptococcus oralis strain FDAARGOS_1021 chromosome, complete genome | blastn | 133547 | 706 | 0.992917847025496 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 23497677 | 23497677 | PRJNA561212_P_NODE_15679_length_285_cov_1.028302_g15468_i0 | PRJNA561212 | 15679 | 285 | 1.028302 | 2.9306607 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|1403776180|emb|LS483311.1| | 1280 | g15468 | i0 | 96.875 | 4.94035087719298 | 32 | 0 | 11 | 1 | 176 | 207 | 1975382 | 1975352 | Staphylococcus aureus strain NCTC6136 genome assembly, chromosome: 1 | blastn | 1408 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 24082633 | 24082633 | PRJNA561212_P_NODE_15539_length_286_cov_1.136150_g15328_i0 | PRJNA561212 | 15539 | 286 | 1.13615 | 3.249389 | Lactococcus | 1357 | Bacteria | Bacteria | 497 | 2.82e-136 | NTclustered | gi|2844548646|gb|CP158368.1| | 1359 | g15328 | i0 | 100 | 55.7167832167832 | 269 | 0 | 94 | 0 | 10 | 278 | 361964 | 362232 | Lactococcus cremoris strain UC023 chromosome, complete genome | blastn | 15935 | 497 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus cremoris | ||
| 24082649 | 24082649 | PRJNA561212_P_NODE_4559_length_517_cov_3.155405_g4350_i0 | PRJNA561212 | 4559 | 517 | 3.155405 | 16.31344385 | Acetoanaerobium | 186831 | Bacteria | Bacteria | 922 | 0 | NTclustered | gi|308824094|emb|FP565809.1| | 1511 | g4350 | i0 | 100 | 1022.11798839458 | 499 | 0 | 97 | 0 | 10 | 508 | 16139 | 16637 | Clostridium sticklandii str. DSM 519 chromosome, complete genome | blastn | 528435 | 922 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Filifactoraceae | Acetoanaerobium | Acetoanaerobium sticklandii | ||
| 25357017 | 25357017 | PRJNA561212_P_NODE_14740_length_292_cov_1.347032_g14529_i0 | PRJNA561212 | 14740 | 292 | 1.347032 | 3.93333344 | Bacillus | 1386 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|510140713|gb|CP005965.1| | 766760 | g14529 | i0 | 100 | 3.47602739726027 | 29 | 0 | 10 | 0 | 222 | 250 | 53936 | 53964 | Bacillus paralicheniformis ATCC 9945a chromosome, complete genome | blastn | 1015 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus paralicheniformis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;