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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA561212 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4373004 4373004 PRJNA561212_P_NODE_7604_length_398_cov_0.950769_g7393_i0 PRJNA561212 7604 398 0.950769 3.78406062 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 60.2 2.28e-4   NTclustered gi|915002923|ref|XM_013393482.1| 5801 g7393 i0 100 0.0804020100502513 32 0 8 0 341 372 2635 2666 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 32 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
5649264 5649264 PRJNA561212_P_NODE_25165_length_243_cov_1.323529_g24954_i0 PRJNA561212 25165 243 1.323529 3.21617547 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|1145258325|ref|XM_012906907.2| 5854 g24954 i0 100 0.395061728395062 30 0 12 0 112 141 4478 4507 Plasmodium reichenowi zinc finger, C3HC4 type, putative partial mRNA blastn 96 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
6923530 6923530 PRJNA561212_P_NODE_3646_length_578_cov_3.916832_g3439_i0 PRJNA561212 3646 578 3.916832 22.63928896 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 327 8.470000000000001e-85   NTclustered gi|1843572353|ref|XM_034565981.1| 5823 g3439 i0 83.807 70.3321799307958 352 49 60 8 172 519 348 1 Plasmodium berghei ANKA ubiquitin-60S ribosomal protein L40, putative (PBANKA_1141700), partial mRNA blastn 40652 327 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
8198379 8198379 PRJNA561212_P_NODE_2707_length_667_cov_12.333333_g2502_i0 PRJNA561212 2707 667 12.333333 82.26333111 Cryptosporidium parvum 5807 SAR_Eukaryotes SAR_Eukaryotes 209 3.73e-49   NTclustered gi|66359883|ref|XM_627120.1| 353152 g2502 i0 78.931 4.66266866566717 318 59 47 8 135 448 380 67 Cryptosporidium parvum Iowa II histone H2A (cgd8_2170) mRNA, complete cds blastn 3110 209 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
8783616 8783616 PRJNA561212_P_NODE_22147_length_249_cov_1.227273_g21936_i0 PRJNA561212 22147 249 1.227273 3.05590977 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 65.8 2.89e-6   NTclustered gi|1624459616|ref|XR_003751929.1| 5858 g21936 i0 93.182 3.49799196787149 44 3 18 0 177 220 2313 2356 Plasmodium malariae rRNA (PmUG01_03032100), rRNA blastn 871 65.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
9474039 9474039 PRJNA561212_P_NODE_2768_length_661_cov_20.168367_g2563_i0 PRJNA561212 2768 661 20.168367 133.31290587 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 261 1e-64   NTclustered gi|2787704165|ref|XM_067344148.1| 1280935 g2563 i0 81.081 60.3464447806354 333 57 50 6 133 462 1 330 Cryptosporidium sp. chipmunk genotype I 60S ribosomal L40 (ELE39_001109), partial mRNA blastn 39889 261 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I
12024423 12024423 PRJNA561212_P_NODE_17290_length_273_cov_1.315000_g17079_i0 PRJNA561212 17290 273 1.315 3.58995 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.39e-4   NTclustered gi|1620180995|ref|XM_028684456.1| 880535 g17079 i0 100 2.12454212454212 31 0 11 0 235 265 3758 3788 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_1417300), partial mRNA blastn 580 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
17123232 17123232 PRJNA561212_P_NODE_6114_length_446_cov_2.865952_g5903_i0 PRJNA561212 6114 446 2.865952 12.78214592 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 233 1.44e-56   NTclustered gi|1673123994|ref|XM_029360740.1| 94643 g5903 i0 78.693 48.0134529147982 352 73 79 2 9 359 2 352 Besnoitia besnoiti ribosomal-ubiquitin protein RPL40 (BESB_020310), partial mRNA blastn 21414 233 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
17123236 17123236 PRJNA561212_P_NODE_6414_length_435_cov_1.486188_g6203_i0 PRJNA561212 6414 435 1.486188 6.4649178 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 115 5.28e-21   NTclustered gi|457876620|ref|XM_004224660.1| 1120755 g6203 i0 89.888 0.655172413793103 89 9 20 0 307 395 1012 1100 Plasmodium cynomolgi strain B HORMA domain containing protein (PCYB_141890) mRNA, complete cds blastn 285 115 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
19672080 19672080 PRJNA561212_P_NODE_9296_length_361_cov_1.468750_g9085_i0 PRJNA561212 9296 361 1.46875 5.3021875 Babesia bovis 5865 SAR_Eukaryotes SAR_Eukaryotes 154 9.12e-33   NTclustered gi|363586005|gb|JN391431.1| 5865 g9085 i0 80.583 48.1191135734072 206 34 57 6 1 204 2561 2360 Babesia bovis isolate Shanxian 28S ribosomal RNA gene, partial sequence blastn 17371 154 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
23497670 23497670 PRJNA561212_P_NODE_15379_length_287_cov_1.373832_g15168_i0 PRJNA561212 15379 287 1.373832 3.94289784 uncultured Eimeriidae 404735 SAR_Eukaryotes SAR_Eukaryotes 409 1.3699999999999998e-109   NTclustered gi|134021988|gb|EF023338.1| 404735 g15168 i0 93.773 84.1393728222996 273 16 95 1 6 278 1387 1658 Eimeriidae environmental sample clone Amb_18S_660 18S ribosomal RNA gene, partial sequence blastn 24148 409 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae   uncultured Eimeriidae
23497690 23497690 PRJNA561212_P_NODE_1639_length_844_cov_1.319066_g1452_i0 PRJNA561212 1639 844 1.319066 11.13291704 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 459 4.279999999999999e-124   NTclustered gi|1027960105|ref|XM_016799852.1| 31271 g1452 i0 78.158 60.1125592417062 760 139 89 24 10 756 1037 292 Plasmodium chabaudi chabaudi 26S protease regulatory subunit 8, putative (PCHAS_1464100), partial mRNA blastn 50735 459 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;