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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA561212" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA561212 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
545367 545367 PRJNA561212_P_NODE_22641_length_248_cov_1.228571_g22430_i0 PRJNA561212 22641 248 1.228571 3.04685608 Dictyostelium discoideum 44689 Evosea other_Eukaryota 84.2 7.95e-12   NTclustered gi|66817435|ref|XM_637479.1| 352472 g22430 i0 81.818 0.516129032258065 99 18 40 0 126 224 901 803 Dictyostelium discoideum AX4 aldose 1-epimerase family protein (DDB_G0277669) mRNA, complete cds blastn 128 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
545406 545406 PRJNA561212_P_NODE_24781_length_244_cov_0.912281_g24570_i0 PRJNA561212 24781 244 0.912281 2.22596564 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 274 4.31e-69   NTclustered gi|33946346|gb|AY294152.1| 242541 g24570 i0 88.261 85.6434426229508 230 25 94 2 10 238 758 530 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 20897 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
1821002 1821002 PRJNA561212_P_NODE_16762_length_277_cov_1.117647_g16551_i0 PRJNA561212 16762 277 1.117647 3.09588219 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 206 1.85e-48   NTclustered gi|470490984|ref|XM_004345790.1| 1257118 g16551 i0 82.278 87.7111913357401 237 42 86 0 25 261 237 1 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_181970), partial mRNA blastn 24296 206 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2406107 2406107 PRJNA561212_P_NODE_25202_length_243_cov_1.200000_g24991_i0 PRJNA561212 25202 243 1.2 2.916 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.6 7.82e-7   NTclustered gi|66828296|ref|XM_642411.1| 352472 g24991 i0 100 25.8189300411523 36 0 15 0 140 175 1871 1836 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0268030) mRNA, complete cds blastn 6274 67.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
3096435 3096435 PRJNA561212_P_NODE_3583_length_584_cov_0.911937_g3376_i0 PRJNA561212 3583 584 0.911937 5.32571208 Dictyostelium discoideum 44689 Evosea other_Eukaryota 60.2 3.45e-4   NTclustered gi|66823500|ref|XM_640013.1| 352472 g3376 i0 94.737 0.229452054794521 38 2 7 0 29 66 2583 2546 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0272486) mRNA, complete cds blastn 134 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
4372948 4372948 PRJNA561212_P_NODE_484_length_1433_cov_17.276471_g389_i0 PRJNA561212 484 1433 17.276471 247.57182943 Paramoeba branchiphila 308475 Discosea other_Eukaryota 809 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g389 i0 78.886 87.7997208653175 1203 246 84 7 182 1380 1200 2 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 125817 809 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
5649197 5649197 PRJNA561212_P_NODE_20345_length_253_cov_0.866667_g20134_i0 PRJNA561212 20345 253 0.866667 2.19266751 Dictyostelium purpureum 5786 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|330790290|ref|XM_003283183.1| 5786 g20134 i0 92.308 0.154150197628458 39 3 15 0 203 241 201 163 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_74181), partial mRNA blastn 39 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
5649309 5649309 PRJNA561212_P_NODE_3945_length_557_cov_5.688017_g3738_i0 PRJNA561212 3945 557 5.688017 31.68225469 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 512 2.09e-140   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g3738 i0 84.079 63.7396768402154 559 60 97 23 10 548 56 605 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 35503 512 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
5649408 5649408 PRJNA561212_P_NODE_9605_length_355_cov_3.237589_g9394_i0 PRJNA561212 9605 355 3.237589 11.49344095 Vannella sp. ACN1 1215628 Discosea other_Eukaryota 608 1.589999999999999e-169   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g9394 i0 99.112 83.3408450704225 338 3 95 0 10 347 1890 1553 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 29586 608 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
6923485 6923485 PRJNA561212_P_NODE_25046_length_244_cov_0.865497_g24835_i0 PRJNA561212 25046 244 0.865497 2.11181268 Dictyostelium discoideum 44689 Evosea other_Eukaryota 60.2 1.32e-4   NTclustered gi|66801224|ref|XM_629536.1| 352472 g24835 i0 94.872 5.5 39 1 16 1 144 182 2114 2077 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0292556) mRNA, complete cds blastn 1342 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
8198377 8198377 PRJNA561212_P_NODE_26467_length_201_cov_4.710938_g26256_i0 PRJNA561212 26467 201 4.710938 9.46898538 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 246 7.47e-61   NTclustered gi|470512968|ref|XM_004352512.1| 1257118 g26256 i0 88.945 89.8009950248756 199 22 99 0 1 199 199 1 Acanthamoeba castellanii str. Neff actin-1, putative (ACA1_361250), partial mRNA blastn 18050 246 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8198460 8198460 PRJNA561212_P_NODE_8387_length_379_cov_1.343137_g8176_i0 PRJNA561212 8387 379 1.343137 5.09048923 Cavenderia subdiscoidea 3067639 Evosea other_Eukaryota 84.2 1.28e-11   NTclustered gi|2558374431|gb|OP168900.1| 3067639 g8176 i0 75.576 19.2981530343008 217 28 53 17 91 292 50885 51091 Cavenderia subdiscoidea strain TH1A voucher DSC<USA-NY>:DBS0350779 mitochondrion, complete genome blastn 7314 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia subdiscoidea
10749536 10749536 PRJNA561212_P_NODE_10049_length_348_cov_1.570909_g9838_i0 PRJNA561212 10049 348 1.5709090000000001 5.46676332 Stenamoeba amazonica 746910 Discosea other_Eukaryota 610 4.34e-170   NTclustered gi|2806326578|gb|PQ345828.1| 746910 g9838 i0 100 75.4022988505747 330 0 95 0 10 339 428 99 Stenamoeba amazonica isolate 7FSb3 small subunit ribosomal RNA gene, partial sequence blastn 26240 610 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba amazonica
12609681 12609681 PRJNA561212_P_NODE_3670_length_577_cov_1.849206_g3463_i0 PRJNA561212 3670 577 1.849206 10.66991862 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 215 6.87e-51   NTclustered gi|187764061|ref|NC_010653.1| 261658 g3463 i0 81.818 37.7781629116118 264 40 45 7 310 568 20784 21044 Dictyostelium fasciculatum mitochondrion, complete genome blastn 21798 217 0.990783410138249 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
13299293 13299293 PRJNA561212_P_NODE_10071_length_348_cov_0.901818_g9860_i0 PRJNA561212 10071 348 0.901818 3.13832664 Ripella tribonemae 2047823 Discosea other_Eukaryota 503 7.57e-138   NTclustered gi|1269228474|gb|MF683599.1| 2047823 g9860 i0 94.277 83.3764367816092 332 13 95 4 10 341 969 644 Ripella tribonemae clone 22.9.5 18S ribosomal RNA gene, partial sequence blastn 29015 503 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
13299407 13299407 PRJNA561212_P_NODE_1671_length_837_cov_3.289267_g1484_i0 PRJNA561212 1671 837 3.289267 27.53116479 Dictyostelium discoideum 44689 Evosea other_Eukaryota 63.9 3.89e-5   NTclustered gi|66815284|ref|XM_636567.1| 352472 g1484 i0 93.023 0.0513739545997611 43 3 5 0 281 323 955 913 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0279493) mRNA, complete cds blastn 43 63.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
13299610 13299610 PRJNA561212_P_NODE_5451_length_473_cov_2.010000_g5240_i0 PRJNA561212 5451 473 2.01 9.5073 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 479 1.7799999999999994e-130   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g5240 i0 87.239 99.2283298097252 431 41 89 7 10 428 33619 33191 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 46935 479 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
13884563 13884563 PRJNA561212_P_NODE_551_length_1363_cov_126.851163_g448_i0 PRJNA561212 551 1363 126.851163 1728.98135169 Entamoeba 5758 Evosea other_Eukaryota 856 0   NTclustered gi|511083902|dbj|AK419160.1| 5759 g448 i0 80.694 82.443873807777 1124 197 82 18 71 1184 29 1142 Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS blastn 112371 856 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
17123024 17123024 PRJNA561212_P_NODE_1674_length_837_cov_1.806283_g1487_i0 PRJNA561212 1674 837 1.806283 15.11858871 Dictyostelium purpureum 5786 Evosea other_Eukaryota 712 0   NTclustered gi|330802803|ref|XM_003289355.1| 5786 g1487 i0 82.497 96.2234169653525 817 137 97 6 7 820 1034 221 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72679), mRNA blastn 80539 712 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17123175 17123175 PRJNA561212_P_NODE_26414_length_225_cov_4.664474_g26203_i0 PRJNA561212 26414 225 4.664474 10.4950665 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 95.3 3.28e-15   NTclustered gi|470519749|ref|XM_004353447.1| 1257118 g26203 i0 91.304 0.982222222222222 69 6 31 0 67 135 156 88 Acanthamoeba castellanii str. Neff ribosomal L29e protein family (ACA1_143310), partial mRNA blastn 221 95.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17708663 17708663 PRJNA561212_P_NODE_3834_length_565_cov_1.075203_g3627_i0 PRJNA561212 3834 565 1.075203 6.07489695 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.015   NTclustered gi|330818738|ref|XM_003291448.1| 5786 g3627 i0 76.577 0.761061946902655 111 18 19 7 439 548 707 604 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_89422), partial mRNA blastn 430 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18397310 18397310 PRJNA561212_P_NODE_22055_length_249_cov_1.954545_g21844_i0 PRJNA561212 22055 249 1.954545 4.86681705 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 388 1.51e-103   NTclustered gi|861553759|gb|KP719186.1| 1678066 g21844 i0 96.983 58.6586345381526 232 5 93 2 10 240 355 125 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 14606 388 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
21532708 21532708 PRJNA561212_P_NODE_16137_length_281_cov_1.673077_g15926_i0 PRJNA561212 16137 281 1.673077 4.70134637 Dictyostelium 5782 Evosea other_Eukaryota 56.5 0.002   NTclustered gi|34328658|gb|AY232273.1| 44689 g15926 i0 94.595 0.362989323843416 37 1 13 1 223 258 521 557 Dictyostelium discoideum putative protein Roco11 (roco11) gene, complete cds blastn 102 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22222414 22222414 PRJNA561212_P_NODE_17818_length_269_cov_1.500000_g17607_i0 PRJNA561212 17818 269 1.5 4.035 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 176 1.4e-39   NTclustered gi|470519083|ref|XM_004353374.1| 1257118 g17607 i0 81.905 5.35687732342007 210 36 78 2 50 258 25 233 Acanthamoeba castellanii str. Neff actinrelated protein 2, putative (ACA1_074650), partial mRNA blastn 1441 176 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22807849 22807849 PRJNA561212_P_NODE_6578_length_429_cov_3.292135_g6367_i0 PRJNA561212 6578 429 3.292135 14.12325915 Saccamoeba 136463 Tubulinea other_Eukaryota 730 0   NTclustered gi|399764206|gb|JQ271717.1| 1215623 g6367 i0 98.547 88.5128205128205 413 6 96 0 9 421 1691 1279 Saccamoeba sp. DP7 18S ribosomal RNA gene, partial sequence blastn 37972 730 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba sp. DP7
23497803 23497803 PRJNA561212_P_NODE_24259_length_245_cov_0.906977_g24048_i0 PRJNA561212 24259 245 0.906977 2.22209365 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|66804734|ref|XM_631008.1| 352472 g24048 i0 94.286 0.142857142857143 35 2 14 0 163 197 2593 2559 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0289755) mRNA, complete cds blastn 35 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24771619 24771619 PRJNA561212_P_NODE_19440_length_258_cov_0.848649_g19229_i0 PRJNA561212 19440 258 0.848649 2.18951442 Diachea silvaepluvialis 2928462 Evosea other_Eukaryota 187 6.169999999999998e-43   NTclustered gi|2329703300|gb|MW240029.1| 2928462 g19229 i0 83.099 88.3565891472868 213 28 81 8 14 222 837 629 Diachea silvaepluvialis strain MA-Fungi 51896 elongation factor 1-alpha (EF1a) gene, partial cds blastn 22796 187 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Diachea Diachea silvaepluvialis
24771840 24771840 PRJNA561212_P_NODE_9840_length_352_cov_0.946237_g9629_i0 PRJNA561212 9840 352 0.946237 3.33075424 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 364 3.7599999999999985e-96   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g9629 i0 86.85 70.7215909090909 327 41 93 2 18 343 1280 955 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 24894 364 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;