RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA561138" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA561138 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4958771 4958771 PRJNA561138_P_NODE_484_length_1747_cov_18.070490_g6_i1 PRJNA561138 484 1747 18.07049 315.6914603 Orthorubulavirus 2560195 Viruses Viruses 3077 0   NTclustered gi|335114|gb|M81442.1|SV5NUCCAP 2560580 g6 i1 98.454 75.6754436176302 1747 27 100 0 1 1747 1 1747 Simian virus 5 (W3A) NP RNA, complete cds blastn 132205 3079 0.999350438454043 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
7508625 7508625 PRJNA561138_P_NODE_346_length_2008_cov_2.446512_g238_i0 PRJNA561138 346 2008 2.446512 49.12596096 Paramyxoviridae 11158 Viruses Viruses 3679 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g238 i0 99.751 69.7963147410359 2007 5 99 0 1 2007 10174 8168 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 140151 3707 0.992446722417049 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
8198086 8198086 PRJNA561138_P_NODE_3167_length_695_cov_1.485531_g2981_i0 PRJNA561138 3167 695 1.485531 10.32444045 Orthorubulavirus mammalis 3052558 Viruses Viruses 1245 0   NTclustered gi|1841764908|gb|MT124463.1| 2905673 g2981 i0 98.993 64.7064748201439 695 7 100 0 1 695 14541 15235 Parainfluenza virus 5 isolate China/HB01/2019, complete genome blastn 44971 1245 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10749372 10749372 PRJNA561138_P_NODE_21809_length_274_cov_1.696517_g21614_i0 PRJNA561138 21809 274 1.696517 4.64845658 Orthorubulavirus mammalis 3052558 Viruses Viruses 468 2.11e-127   NTclustered gi|1028325827|gb|KX060176.1| 2905673 g21614 i0 99.609 77.4270072992701 256 1 93 0 1 256 8009 8264 Parainfluenza virus 5 strain AGS, complete genome blastn 21215 468 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12609604 12609604 PRJNA561138_P_NODE_23890_length_255_cov_2.115385_g23695_i0 PRJNA561138 23890 255 2.115385 5.39423175 Orthorubulavirus 2560195 Viruses Viruses 472 1.5e-128   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g23695 i0 100 68.756862745098 255 0 100 0 1 255 14181 13927 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 17533 472 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13884489 13884489 PRJNA561138_P_NODE_23931_length_255_cov_1.417582_g23736_i0 PRJNA561138 23931 255 1.417582 3.6148341 Orthorubulavirus 2560195 Viruses Viruses 449 7.03e-122   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g23736 i0 98.81 68.7058823529412 252 3 99 0 1 252 14265 14516 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 17520 449 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13884529 13884529 PRJNA561138_P_NODE_7371_length_458_cov_1.200000_g7177_i0 PRJNA561138 7371 458 1.2 5.496 Orthorubulavirus 2560195 Viruses Viruses 846 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g7177 i0 100 68.8013100436681 458 0 100 0 1 458 12155 11698 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 31511 846 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
16433356 16433356 PRJNA561138_P_NODE_3753_length_636_cov_0.939609_g3564_i0 PRJNA561138 3753 636 0.939609 5.97591324 Orthorubulavirus 2560195 Viruses Viruses 1142 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g3564 i0 99.057 67.9921383647799 636 6 100 0 1 636 13235 13870 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 43243 1147 0.995640802092415 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
21532618 21532618 PRJNA561138_P_NODE_14017_length_349_cov_1.949275_g13822_i0 PRJNA561138 14017 349 1.949275 6.80296975 Paramyxoviridae 11158 Viruses Viruses 638 1.99e-178   NTclustered gi|2721617856|gb|PP711545.1| 251774 g13822 i0 99.713 67.8051575931232 348 1 99 0 1 348 12172 11825 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 23664 638 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
21532624 21532624 PRJNA561138_P_NODE_15037_length_338_cov_1.184906_g14842_i0 PRJNA561138 15037 338 1.184906 4.00498228 Orthorubulavirus 2560195 Viruses Viruses 617 2.51e-172   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g14842 i0 99.703 67.7751479289941 337 1 99 0 2 338 11670 11334 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 22908 617 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
21532685 21532685 PRJNA561138_P_NODE_5797_length_515_cov_1.402715_g5603_i0 PRJNA561138 5797 515 1.402715 7.22398225 Paramyxoviridae 11158 Viruses Viruses 952 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g5603 i0 100 70.8349514563107 515 0 100 0 1 515 7566 8080 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 36480 952 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
24771462 24771462 PRJNA561138_P_NODE_80_length_8611_cov_16.783673_g6_i0 PRJNA561138 80 8611 16.783673 1445.24208203 Orthorubulavirus mammalis 3052558 Viruses Viruses 15407 0   NTclustered gi|2671791284|gb|PP189887.1| 2905673 g6 i0 99.025 72.5236325630008 8611 52 100 7 1 8611 1 8579 Parainfluenza virus 5 isolate PPIV-5/LZ-1/Gansu/2021, complete genome blastn 624501 15407 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;