RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA561138" and tax_kingdom = "Fungi"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA561138 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2406059 2406059 PRJNA561138_P_NODE_27982_length_245_cov_0.895349_g27787_i0 PRJNA561138 27982 245 0.895349 2.19360505 Malassezia 55193 Fungi Fungi 453 5.1900000000000006e-123   NTclustered gi|724086716|gb|KM269140.1| 76773 g27787 i0 100 99.7020408163265 245 0 100 0 1 245 1156 912 Malassezia globosa strain 123.1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24427 453 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
5648949 5648949 PRJNA561138_P_NODE_27425_length_246_cov_0.890173_g27230_i0 PRJNA561138 27425 246 0.890173 2.18982558 Aspergillus sydowii 75750 Fungi Fungi 261 3.39e-65   NTclustered gi|2028175029|ref|XM_040851741.1| 1036612 g27230 i0 100 1.09349593495935 141 0 57 0 106 246 1215 1075 Aspergillus sydowii CBS 593.65 uncharacterized protein (ASPSYDRAFT_86882), partial mRNA blastn 269 261 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus sydowii
6923153 6923153 PRJNA561138_P_NODE_27526_length_246_cov_0.890173_g27331_i0 PRJNA561138 27526 246 0.890173 2.18982558 Ganoderma boninense 34458 Fungi Fungi 135 2.14e-27   NTclustered gi|1768658276|emb|LR727085.1| 34458 g27331 i0 78.571 1.78455284552846 224 35 87 6 3 215 1210 1431 Ganoderma boninense Q55M11 gene for Uncharacterized protein blastn 439 135 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma boninense
16433308 16433308 PRJNA561138_P_NODE_16173_length_326_cov_1.513834_g15978_i0 PRJNA561138 16173 326 1.513834 4.93509884 Opisthokonta 33154 Fungi Fungi 603 6.749999999999998e-168   NTclustered gi|325484983|gb|HQ407432.1| 5061 g15978 i0 100 99.8895705521472 326 0 100 0 1 326 668 343 Aspergillus niger strain B1.Eg mitochondrial citrate synthase precursor, gene, partial cds; nuclear gene for mitochondrial product blastn 32564 603 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
17122826 17122826 PRJNA561138_P_NODE_26614_length_247_cov_1.770115_g26419_i0 PRJNA561138 26614 247 1.770115 4.37218405 Malassezia restricta 76775 Fungi Fungi 254 5.699999999999999e-63   NTclustered gi|1546634298|ref|XM_027628809.1| 76775 g26419 i0 100 0.554655870445344 137 0 55 0 111 247 1 137 Malassezia restricta uncharacterized protein (MRET_2182), partial mRNA blastn 137 254 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;