RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560932 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
544530 544530 PRJNA560932_P_NODE_24861_length_357_cov_1.049296_g24505_i0 PRJNA560932 24861 357 1.049296 3.74598672 Linderina pennispora 61395 Fungi Fungi 63.9 1.56e-5   NTclustered gi|2028324264|ref|XM_040889824.1| 61395 g24505 i0 97.297 9.1484593837535 37 1 10 0 210 246 742 706 Linderina pennispora uncharacterized protein (DL89DRAFT_285490), partial mRNA blastn 3266 63.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
12023576 12023576 PRJNA560932_P_NODE_15410_length_446_cov_5.938338_g15055_i0 PRJNA560932 15410 446 5.938338 26.48498748 Piptocephalis corymbifera 78917 Fungi Fungi 71.3 1.19e-7   NTclustered gi|311235601|ref|NG_027616.1| 78917 g15055 i0 88.333 1.51345291479821 60 6 13 1 318 376 3234 3175 Piptocephalis corymbifera NRRL 2385 28S rRNA gene, partial sequence; from reference material blastn 675 71.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis corymbifera
17122414 17122414 PRJNA560932_P_NODE_43434_length_277_cov_1.509804_g43078_i0 PRJNA560932 43434 277 1.509804 4.18215708 Linderina pennispora 61395 Fungi Fungi 141 5.29e-29   NTclustered gi|2028323872|ref|XM_040889531.1| 61395 g43078 i0 76.241 11.1660649819495 282 57 100 9 1 277 1523 1799 Linderina pennispora glucose-regulated protein (DL89DRAFT_278812), partial mRNA blastn 3093 141 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;