RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560932 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1130581 1130581 PRJNA560932_P_NODE_36821_length_299_cov_4.619469_g36465_i0 PRJNA560932 36821 299 4.619469 13.81221231 Adineta 104781 Rotifera other_Eukaryota 532 8.139999999999998e-147   NTclustered gi|1005055512|gb|KU860655.1| 1813164 g36465 i0 98.671 26.5585284280936 301 2 100 1 1 299 1737 1437 Adineta vaga complex sp. A JFF-2016 isolate H001 28S ribosomal RNA gene, partial sequence blastn 7941 532 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. A JFF-2016
1130588 1130588 PRJNA560932_P_NODE_41721_length_282_cov_5.066986_g41365_i0 PRJNA560932 41721 282 5.066986 14.28890052 Opisthokonta 33154 Rotifera other_Eukaryota 505 1.6599999999999995e-138   NTclustered gi|72153731|gb|DQ089739.1| 104782 g41365 i0 98.936 94.0106382978723 282 3 100 0 1 282 502 783 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 26511 510 0.990196078431373 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
1820188 1820188 PRJNA560932_P_NODE_16962_length_427_cov_1.166667_g16606_i0 PRJNA560932 16962 427 1.166667 4.98166809 Habrotrocha constricta 104786 Rotifera other_Eukaryota 440 7.519999999999997e-119   NTclustered gi|402761725|gb|JX183994.1| 104786 g16606 i0 85.315 1.97658079625293 429 59 100 4 1 427 569 143 Habrotrocha constricta ATP synthase F0 subunit 6 (ATP6) gene, partial cds; mitochondrial blastn 844 440 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
8197529 8197529 PRJNA560932_P_NODE_27907_length_339_cov_10.932331_g27551_i0 PRJNA560932 27907 339 10.932331 37.06060209 Philodina roseola 96448 Rotifera other_Eukaryota 595 1.1799999999999996e-165   NTclustered gi|37785582|gb|AY210469.1| 96448 g27551 i0 100 76.2949852507375 322 0 95 0 18 339 5 326 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 25864 595 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
8783505 8783505 PRJNA560932_P_NODE_8987_length_580_cov_5.763314_g8634_i0 PRJNA560932 8987 580 5.763314 33.4272212 Philodinidae 44580 Rotifera other_Eukaryota 592 2.729999999999999e-164   NTclustered gi|270267490|ref|NC_013568.1| 231624 g8634 i0 85.915 27.4224137931034 568 65 97 14 20 579 1843 2403 Rotaria rotatoria mitochondrion, complete genome blastn 15905 592 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
9473115 9473115 PRJNA560932_P_NODE_19828_length_395_cov_3.055901_g19472_i0 PRJNA560932 19828 395 3.055901 12.07080895 Philodina citrina 468664 Rotifera other_Eukaryota 547 3.9499999999999996e-151   NTclustered gi|407227484|emb|FR856884.1| 468664 g19472 i0 93.085 44.2658227848101 376 22 95 3 22 395 1831 2204 Philodina citrina complete mitochondrial genome blastn 17485 547 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
10059089 10059089 PRJNA560932_P_NODE_28808_length_335_cov_1.122137_g28452_i0 PRJNA560932 28808 335 1.122137 3.7591589500000002 Brachionus 10194 Rotifera other_Eukaryota 150 1.09e-31   NTclustered gi|632795126|gb|KJ489417.1| 392764 g28452 i0 81.383 1.12238805970149 188 31 56 4 17 202 8446 8631 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 376 150 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
15847753 15847753 PRJNA560932_P_NODE_7113_length_648_cov_2.215652_g6761_i0 PRJNA560932 7113 648 2.215652 14.35742496 Lepadellidae sp. SHQC150123a 1804024 Rotifera other_Eukaryota 649 0   NTclustered gi|1009658444|gb|KU720095.1| 1804024 g6761 i0 86.409 92.2746913580247 596 78 92 3 55 648 1 595 Lepadellidae sp. SHQC150123a cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 59794 649 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae   Lepadellidae sp. SHQC150123a
17122341 17122341 PRJNA560932_P_NODE_32694_length_317_cov_1.241803_g32338_i0 PRJNA560932 32694 317 1.241803 3.93651551 Philodina roseola 96448 Rotifera other_Eukaryota 577 3.9599999999999985e-160   NTclustered gi|37785582|gb|AY210469.1| 96448 g32338 i0 99.683 96.4637223974763 315 1 99 0 1 315 376 690 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 30579 577 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
19671071 19671071 PRJNA560932_P_NODE_25676_length_352_cov_1.358423_g25320_i0 PRJNA560932 25676 352 1.358423 4.78164896 Adineta vaga 104782 Rotifera other_Eukaryota 628 1.2099999999999999e-175   NTclustered gi|72153731|gb|DQ089739.1| 104782 g25320 i0 98.864 68.0085227272727 352 4 100 0 1 352 2807 2456 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 23939 628 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22221647 22221647 PRJNA560932_P_NODE_23818_length_364_cov_1.058419_g23462_i0 PRJNA560932 23818 364 1.058419 3.85264516 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 231 4.1299999999999995e-56   NTclustered gi|1066800230|gb|KX364937.1| 96890 g23462 i0 80.872 50.4697802197802 298 53 81 4 68 363 1439 1144 Brachionus rotundiformis chromosome II mitochondrion, complete sequence blastn 18371 231 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
22221780 22221780 PRJNA560932_P_NODE_40078_length_287_cov_4.214953_g39722_i0 PRJNA560932 40078 287 4.214953 12.09691511 Philodina roseola 96448 Rotifera other_Eukaryota 529 1.01e-145   NTclustered gi|37785582|gb|AY210469.1| 96448 g39722 i0 100 55.2299651567944 286 0 99 0 1 286 1519 1804 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 15851 529 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
23497129 23497129 PRJNA560932_P_NODE_5039_length_761_cov_9.764535_g4710_i0 PRJNA560932 5039 761 9.764535 74.30811135 Brachionus rubens 392764 Rotifera other_Eukaryota 390 1.42e-103   NTclustered gi|632795126|gb|KJ489417.1| 392764 g4710 i0 77.341 26.8672798948752 737 117 94 43 5 722 11143 10438 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 20446 390 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;