RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560932 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4371992 4371992 PRJNA560932_P_NODE_24924_length_356_cov_1.710247_g24568_i0 PRJNA560932 24924 356 1.710247 6.08847932 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 52.8 0.034   NTclustered gi|196002546|ref|XM_002111105.1| 10228 g24568 i0 100 0.0786516853932584 28 0 8 0 329 356 44 71 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_4397), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
14573467 14573467 PRJNA560932_P_NODE_20212_length_392_cov_0.987461_g19856_i0 PRJNA560932 20212 392 0.987461 3.87084712 Placozoa sp. H4 1034858 Placozoa other_Eukaryota 198 4.549999999999999e-46   NTclustered gi|469664362|gb|KC465276.1| 1034858 g19856 i0 81.667 11.0612244897959 240 42 61 2 24 262 107 345 Placozoa sp. H4 ras-related protein Rab-7 (Rab7) mRNA, complete cds blastn 4336 198 1 Eukaryota Opisthokonta Metazoa Placozoa         Placozoa sp. H4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;