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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA560932 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1820132 1820132 PRJNA560932_P_NODE_11622_length_512_cov_1.635535_g11268_i0 PRJNA560932 11622 512 1.635535 8.3739392 Paravannella minima 1443144 Discosea other_Eukaryota 597 5.1299999999999985e-166   NTclustered gi|571331049|gb|KF895376.1| 1443144 g11268 i0 87.819 99.64453125 509 62 99 0 1 509 85 593 Paravannella minima strain CCAP 1533/1 clone 1 actin gene, partial cds blastn 51018 597 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
2405989 2405989 PRJNA560932_P_NODE_6282_length_686_cov_12.931485_g5939_i0 PRJNA560932 6282 686 12.931485 88.7099871 Cochliopodium 313557 Discosea other_Eukaryota 904 0   NTclustered gi|59876024|gb|AY785057.1| 313998 g5939 i0 90.504 57.2069970845481 695 50 99 14 1 684 37 726 Cochliopodium sp. strain Kiel 18S ribosomal RNA gene, partial sequence blastn 39244 907 0.996692392502756 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. strain Kiel
4371872 4371872 PRJNA560932_P_NODE_14424_length_461_cov_1.675258_g14069_i0 PRJNA560932 14424 461 1.675258 7.72293938 Vannella sp. strain 4432/I 325076 Discosea other_Eukaryota 745 0   NTclustered gi|62865954|gb|AY929929.1| 325076 g14069 i0 95.879 49.4902386117137 461 18 99 1 1 460 14 474 Vannella sp. strain 4432/I internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 22815 745 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4432/I
4372038 4372038 PRJNA560932_P_NODE_2924_length_970_cov_2.546265_g2663_i0 PRJNA560932 2924 970 2.546265 24.6987705 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 584 7.829999999999998e-162   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g2663 i0 78.548 82.9835051546392 909 180 93 11 67 969 2520 1621 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 80494 584 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5648698 5648698 PRJNA560932_P_NODE_66165_length_241_cov_1.607143_g65809_i0 PRJNA560932 66165 241 1.607143 3.87321463 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 152 2.08e-32   NTclustered gi|470443630|ref|XM_004339621.1| 1257118 g65809 i0 83.041 1.49377593360996 171 25 70 4 68 236 265 97 Acanthamoeba castellanii str. Neff Rasrelated protein Rac1, putative (ACA1_064420), partial mRNA blastn 360 152 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6922489 6922489 PRJNA560932_P_NODE_18546_length_408_cov_43.170149_g18190_i0 PRJNA560932 18546 408 43.170149 176.13420792 Vannella septentrionalis 197531 Discosea other_Eukaryota 549 1.1399999999999994e-151   NTclustered gi|300078499|gb|GU001161.1| 197531 g18190 i0 90.909 94.5 418 25 99 11 1 407 3414 3829 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 38556 549 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
6922528 6922528 PRJNA560932_P_NODE_23086_length_369_cov_1.351351_g22730_i0 PRJNA560932 23086 369 1.351351 4.98648519 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 167 1.2e-36   NTclustered gi|470525918|ref|XM_004356620.1| 1257118 g22730 i0 85.366 1.48780487804878 164 21 44 3 140 302 1006 1167 Acanthamoeba castellanii str. Neff actinrelated protein 2 isoform 4, putative (ACA1_174340), partial mRNA blastn 549 167 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6922587 6922587 PRJNA560932_P_NODE_28426_length_337_cov_1.162879_g28070_i0 PRJNA560932 28426 337 1.162879 3.91890223 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.002   NTclustered gi|470410080|ref|XM_004336187.1| 1257118 g28070 i0 100 0.0890207715133531 30 0 9 0 135 164 191 220 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_139390), partial mRNA blastn 30 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6922915 6922915 PRJNA560932_P_NODE_8366_length_600_cov_20.303605_g8013_i0 PRJNA560932 8366 600 20.303605 121.82163 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 918 0   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g8013 i0 95.517 60.79 580 17 96 9 27 600 4 580 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 36474 918 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
8197350 8197350 PRJNA560932_P_NODE_11727_length_509_cov_105.784404_g11373_i0 PRJNA560932 11727 509 105.784404 538.44261636 Vannella sp. strain 4432/I 325076 Discosea other_Eukaryota 911 0   NTclustered gi|62865935|gb|AY929910.1| 325076 g11373 i0 99.016 101.732809430255 508 5 99 0 2 509 1937 1430 Vannella sp. strain 4432/I 18S small subunit ribosomal RNA gene, partial sequence blastn 51782 911 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4432/I
8197408 8197408 PRJNA560932_P_NODE_16387_length_434_cov_1.257618_g16031_i0 PRJNA560932 16387 434 1.257618 5.45806212 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 148 5.2e-31   NTclustered gi|470423488|ref|XM_004337555.1| 1257118 g16031 i0 79.263 45.46313364055301 217 41 50 4 32 246 367 581 Acanthamoeba castellanii str. Neff ribosomal protein L23, putative (ACA1_164710), partial mRNA blastn 19731 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8197610 8197610 PRJNA560932_P_NODE_38587_length_292_cov_3.876712_g38231_i0 PRJNA560932 38587 292 3.876712 11.31999904 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 219 2.52e-52   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g38231 i0 84.305 17.513698630137 223 35 76 0 6 228 242 20 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 5114 219 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8197635 8197635 PRJNA560932_P_NODE_41047_length_284_cov_2.786730_g40691_i0 PRJNA560932 41047 284 2.78673 7.9143132 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 388 1.7599999999999998e-103   NTclustered gi|330902889|gb|JF298269.1| 1017091 g40691 i0 91.756 93.1091549295775 279 23 98 0 6 284 579 301 Cochliopodium larifeili clone 1807 actin gene, partial cds blastn 26443 388 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
9473446 9473446 PRJNA560932_P_NODE_66048_length_241_cov_2.291667_g65692_i0 PRJNA560932 66048 241 2.291667 5.52291747 Thecamoeba similis 242545 Discosea other_Eukaryota 272 1.5299999999999999e-68   NTclustered gi|33946350|gb|AY294154.1| 242545 g65692 i0 88.789 80.3775933609958 223 24 92 1 2 223 247 25 Thecamoeba similis actin mRNA, complete cds blastn 19371 272 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
12023756 12023756 PRJNA560932_P_NODE_350_length_1953_cov_5.647340_g281_i0 PRJNA560932 350 1953 5.64734 110.2925502 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 3227 0   NTclustered gi|330902855|gb|JF298253.1| 1017091 g281 i0 96.849 50.126472094214 1936 50 99 9 1 1930 1934 4 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 97897 3227 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
12024002 12024002 PRJNA560932_P_NODE_8410_length_599_cov_1.684411_g8057_i0 PRJNA560932 8410 599 1.684411 10.08962189 Vannella septentrionalis 197531 Discosea other_Eukaryota 1027 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g8057 i0 97.663 45.6026711185309 599 12 99 1 1 597 3141 2543 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 27316 1027 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
12609500 12609500 PRJNA560932_P_NODE_20810_length_386_cov_3.817891_g20454_i0 PRJNA560932 20810 386 3.817891 14.73705926 Vannella 95228 Discosea other_Eukaryota 664 0   NTclustered gi|270381377|emb|FN598227.1| 544561 g20454 i0 97.668 90.1476683937824 386 9 100 0 1 386 1037 652 Uncultured Vannellidae partial 18S rRNA gene, clone BIO1_A11 blastn 34797 669 0.992526158445441 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
13298476 13298476 PRJNA560932_P_NODE_10131_length_547_cov_5.280591_g9777_i0 PRJNA560932 10131 547 5.280591 28.88483277 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 267 1.77e-66   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g9777 i0 81.962 56.563071297989 316 56 58 1 103 417 422 107 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30940 267 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13298796 13298796 PRJNA560932_P_NODE_48071_length_263_cov_1.263158_g47715_i0 PRJNA560932 48071 263 1.263158 3.32210554 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 163 1.06e-35   NTclustered gi|470423206|ref|XM_004337526.1| 1257118 g47715 i0 78.656 53.9429657794677 253 48 95 5 5 254 1288 1039 Acanthamoeba castellanii str. Neff 3oxoacid CoA transferase 1 isoform 3, putative (ACA1_164100), partial mRNA blastn 14187 163 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14573420 14573420 PRJNA560932_P_NODE_15552_length_444_cov_4.876011_g15197_i0 PRJNA560932 15552 444 4.876011 21.64948884 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 542 2.09e-149   NTclustered gi|330902897|gb|JF298273.1| 313558 g15197 i0 92.781 87.5900900900901 374 27 84 0 71 444 595 222 Cochliopodium spiniferum clone 5102 actin gene, partial cds blastn 38890 542 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
14573852 14573852 PRJNA560932_P_NODE_67592_length_238_cov_2.460606_g67236_i0 PRJNA560932 67592 238 2.460606 5.85624228 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 230 9.199999999999998e-56   NTclustered gi|470412384|ref|XM_004336417.1| 1257118 g67236 i0 84.034 95.9117647058823 238 38 100 0 1 238 943 706 Acanthamoeba castellanii str. Neff phosphoenolpyruvate carboxykinase (GTP), putative (ACA1_191500), partial mRNA blastn 22827 230 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17122588 17122588 PRJNA560932_P_NODE_6674_length_668_cov_2.680672_g6324_i0 PRJNA560932 6674 668 2.680672 17.90688896 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 379 2.6900000000000003e-100   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g6324 i0 79.417 73.1526946107784 549 103 81 8 12 555 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 48866 379 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19671008 19671008 PRJNA560932_P_NODE_18476_length_409_cov_2.089286_g18120_i0 PRJNA560932 18476 409 2.089286 8.54517974 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 217 1.32e-51   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g18120 i0 80.208 60.1051344743276 288 57 70 0 3 290 408 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 24583 217 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20947080 20947080 PRJNA560932_P_NODE_7717_length_624_cov_1.985481_g7365_i0 PRJNA560932 7717 624 1.985481 12.38940144 Vannella septentrionalis 197531 Discosea other_Eukaryota 1070 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g7365 i0 97.596 38.4807692307692 624 15 100 0 1 624 1616 993 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24012 1070 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
22221602 22221602 PRJNA560932_P_NODE_18798_length_406_cov_1.321321_g18442_i0 PRJNA560932 18798 406 1.321321 5.36456326 Paramoeba branchiphila 308475 Discosea other_Eukaryota 339 2.6699999999999996e-88   NTclustered gi|226347442|gb|FJ807261.1| 308475 g18442 i0 81.931 89.2389162561576 404 69 99 4 3 404 634 233 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 36231 339 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
22807674 22807674 PRJNA560932_P_NODE_19118_length_402_cov_2.987842_g18762_i0 PRJNA560932 19118 402 2.987842 12.01112484 Vannella 95228 Discosea other_Eukaryota 741 0   NTclustered gi|319659359|gb|GU320596.1| 943212 g18762 i0 100 99.6467661691542 401 0 99 0 1 401 6 406 Vannella sp. COHH 62 18S ribosomal RNA gene, partial sequence blastn 40058 741 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. COHH 62
23497090 23497090 PRJNA560932_P_NODE_43719_length_276_cov_1.807882_g43363_i0 PRJNA560932 43719 276 1.807882 4.98975432 Vannella septentrionalis 197531 Discosea other_Eukaryota 438 1.6699999999999996e-118   NTclustered gi|300078499|gb|GU001161.1| 197531 g43363 i0 95.307 34.5760869565217 277 11 99 1 2 276 4342 4066 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9543 438 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
23497213 23497213 PRJNA560932_P_NODE_6339_length_683_cov_17.983607_g5994_i0 PRJNA560932 6339 683 17.983607 122.82803581 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 950 0   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g5994 i0 91.942 60.796486090776 695 30 100 11 1 683 1320 2000 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 41524 950 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
24770847 24770847 PRJNA560932_P_NODE_24360_length_360_cov_1.341463_g24004_i0 PRJNA560932 24360 360 1.341463 4.8292668 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 122 2.5599999999999998e-23   NTclustered gi|470380126|ref|XM_004333611.1| 1257118 g24004 i0 80.473 0.469444444444444 169 26 46 6 74 237 3391 3225 Acanthamoeba castellanii str. Neff gtpase-activator protein for Ras family gtpase (ACA1_260100), partial mRNA blastn 169 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24771151 24771151 PRJNA560932_P_NODE_67500_length_240_cov_2.928144_g67144_i0 PRJNA560932 67500 240 2.928144 7.0275456 Vannella septentrionalis 197531 Discosea other_Eukaryota 438 1.4199999999999995e-118   NTclustered gi|300078499|gb|GU001161.1| 197531 g67144 i0 99.583 87.6333333333333 240 1 100 0 1 240 3468 3707 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21032 438 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;