RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560932 · 18 ✖

analysis 1

  • blastn · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
544610 544610 PRJNA560932_P_NODE_31701_length_321_cov_1.560484_g31345_i0 PRJNA560932 31701 321 1.560484 5.00915364 Orbicella faveolata 48498 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|1176112663|ref|XM_020771710.1| 48498 g31345 i0 100 0.0934579439252336 30 0 9 0 253 282 6916 6887 PREDICTED: Orbicella faveolata uncharacterized LOC110064637 (LOC110064637), partial mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
544661 544661 PRJNA560932_P_NODE_39541_length_289_cov_1.615741_g39185_i0 PRJNA560932 39541 289 1.615741 4.66949149 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 198 3.25e-46   NTclustered gi|1603774355|ref|XM_028559500.1| 151771 g39185 i0 79.371 54.598615916955 286 55 98 4 6 289 836 553 PREDICTED: Dendronephthya gigantea polyubiquitin (LOC114538342), mRNA blastn 15779 198 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
544767 544767 PRJNA560932_P_NODE_55061_length_249_cov_0.875000_g54705_i0 PRJNA560932 55061 249 0.875 2.17875 Eunicella cavolini 317547 Cnidaria other_Eukaryota 63.9 1.04e-5   NTclustered gi|2918369539|emb|OZ237721.1| 317547 g54705 i0 100 0.546184738955823 34 0 14 0 6 39 31477158 31477191 Eunicella cavolini genome assembly, chromosome: 5 blastn 136 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
1820337 1820337 PRJNA560932_P_NODE_33202_length_315_cov_0.954545_g32846_i0 PRJNA560932 33202 315 0.954545 3.00681675 Eunicella cavolini 317547 Cnidaria other_Eukaryota 63.9 1.36e-5   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g32846 i0 93.182 0.13968253968254 44 1 13 1 232 273 34358931 34358888 Eunicella cavolini genome assembly, chromosome: 3 blastn 44 63.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
1820454 1820454 PRJNA560932_P_NODE_49442_length_258_cov_2.097297_g49086_i0 PRJNA560932 49442 258 2.097297 5.41102626 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 115 2.95e-21   NTclustered gi|1524861164|ref|XM_027181817.1| 46731 g49086 i0 81.752 2.14728682170543 137 25 53 0 41 177 318 182 PREDICTED: Pocillopora damicornis MOB kinase activator 1B (LOC113666061), mRNA blastn 554 115 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
3095714 3095714 PRJNA560932_P_NODE_48143_length_263_cov_1.210526_g47787_i0 PRJNA560932 48143 263 1.210526 3.18368338 Podocoryna carnea 6096 Cnidaria other_Eukaryota 195 3.77e-45   NTclustered gi|396251|emb|X71384.1| 6096 g47787 i0 80.632 4.39923954372624 253 47 96 2 7 258 375 124 P.carnea mRNA for 40S ribosomal protein S14 blastn 1157 195 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Podocoryna Podocoryna carnea
6922580 6922580 PRJNA560932_P_NODE_27646_length_341_cov_1.470149_g27290_i0 PRJNA560932 27646 341 1.470149 5.01320809 Ceratomyxa leatherjacketi 1579382 Cnidaria other_Eukaryota 60.2 1.93e-4   NTclustered gi|730837044|gb|KM392428.1| 1579382 g27290 i0 100 0.18475073313783 32 0 9 0 310 341 380 411 Ceratomyxa leatherjacketi isolate LJ-GB-B 28S ribosomal RNA gene, partial sequence blastn 63 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratomyxa Ceratomyxa leatherjacketi
9473248 9473248 PRJNA560932_P_NODE_38048_length_295_cov_1.040541_g37692_i0 PRJNA560932 38048 295 1.040541 3.06959595 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2729088135|ref|XM_065206661.1| 499914 g37692 i0 100 0.196610169491525 29 0 10 0 23 51 1742 1714 PREDICTED: Rhopilema esculentum ralA-binding protein 1-like (LOC135689437), transcript variant X2, mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
12023663 12023663 PRJNA560932_P_NODE_24590_length_358_cov_2.431579_g24234_i0 PRJNA560932 24590 358 2.431579 8.70505282 Eunicella cavolini 317547 Cnidaria other_Eukaryota 52.8 0.034   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g24234 i0 100 0.0782122905027933 28 0 8 0 165 192 10785244 10785217 Eunicella cavolini genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
12023818 12023818 PRJNA560932_P_NODE_43010_length_278_cov_2.473171_g42654_i0 PRJNA560932 43010 278 2.473171 6.87541538 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 150 8.82e-32   NTclustered gi|2202661671|ref|XM_047003315.1| 2897299 g42654 i0 80.513 5.75179856115108 195 38 70 0 82 276 2908 2714 PREDICTED: Xenia sp. Carnegie-2017 26S proteasome non-ATPase regulatory subunit 2-like (LOC124452719), mRNA blastn 1599 150 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
13298566 13298566 PRJNA560932_P_NODE_18351_length_411_cov_0.937870_g17995_i0 PRJNA560932 18351 411 0.93787 3.8546457 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 67.6 1.41e-6   NTclustered gi|1619643801|ref|XM_021045130.2| 2652724 g17995 i0 85.714 0.153284671532847 63 9 15 0 40 102 2859 2797 PREDICTED: Exaiptasia diaphana unconventional myosin-VI (LOC110239414), mRNA blastn 63 67.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
13298818 13298818 PRJNA560932_P_NODE_51631_length_252_cov_0.860335_g51275_i0 PRJNA560932 51631 252 0.860335 2.1680442 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 206 1.66e-48   NTclustered gi|2782871477|ref|XM_067061169.1| 252671 g51275 i0 81.6 47.5595238095238 250 44 99 2 2 250 277 525 PREDICTED: Clytia hemisphaerica ras-related C3 botulinum toxin substrate 1 (LOC136804570), mRNA blastn 11985 206 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
14573723 14573723 PRJNA560932_P_NODE_49092_length_259_cov_15.618280_g48736_i0 PRJNA560932 49092 259 15.61828 40.4513452 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 137 6.33e-28   NTclustered gi|605060084|gb|KF874224.1| 109801 g48736 i0 86.992 49.2200772200772 123 14 47 2 1 123 353 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12748 137 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
15847546 15847546 PRJNA560932_P_NODE_39393_length_290_cov_1.059908_g39037_i0 PRJNA560932 39393 290 1.059908 3.0737332 Gymnangium hians 58820 Cnidaria other_Eukaryota 276 1.46e-69   NTclustered gi|1185380918|gb|KY117129.1| 58820 g39037 i0 89.14 71.3310344827586 221 24 76 0 1 221 221 1 Gymnangium hians isolate DNA927 calmodulin (CAM) gene, partial cds blastn 20686 276 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Aglaopheniidae Gymnangium Gymnangium hians
19671146 19671146 PRJNA560932_P_NODE_33736_length_312_cov_1.945607_g33380_i0 PRJNA560932 33736 312 1.945607 6.07029384 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 52.8 0.029   NTclustered gi|1619612906|ref|XM_028656889.1| 2652724 g33380 i0 100 0.0897435897435897 28 0 9 0 161 188 547 520 PREDICTED: Exaiptasia diaphana uncharacterized LOC114574402 (LOC114574402), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
19671153 19671153 PRJNA560932_P_NODE_34776_length_308_cov_1.310638_g34420_i0 PRJNA560932 34776 308 1.310638 4.03676504 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2202608321|ref|XM_046984190.1| 2897299 g34420 i0 96.875 0.103896103896104 32 1 10 0 1 32 1404 1373 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124434301 (LOC124434301), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
20946699 20946699 PRJNA560932_P_NODE_21937_length_377_cov_5.273026_g21581_i0 PRJNA560932 21937 377 5.273026 19.87930802 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 276 1.96e-69   NTclustered gi|2518991437|ref|XM_057446583.1| 13093 g21581 i0 83.498 73.503978779840807 303 42 79 7 79 377 511 213 PREDICTED: Hydractinia symbiolongicarpus ubiquitin-60S ribosomal protein L40 (LOC130636750), mRNA blastn 27711 276 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
20946942 20946942 PRJNA560932_P_NODE_49977_length_257_cov_1.222826_g49621_i0 PRJNA560932 49977 257 1.222826 3.14266282 Orbicella faveolata 48498 Cnidaria other_Eukaryota 52.8 0.023   NTclustered gi|1176080626|ref|XM_020754757.1| 48498 g49621 i0 100 0.217898832684825 28 0 11 0 229 256 483 510 PREDICTED: Orbicella faveolata uncharacterized LOC110048990 (LOC110048990), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;