RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560932 · 19 ✖

analysis 1

  • blastn · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
544738 544738 PRJNA560932_P_NODE_49781_length_257_cov_1.956522_g49425_i0 PRJNA560932 49781 257 1.956522 5.02826154 Polychytrium aggregatum 110093 Fungi Fungi 121 6.319999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g49425 i0 84.252 9.27626459143969 127 16 49 3 128 252 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2384 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
1130582 1130582 PRJNA560932_P_NODE_37041_length_298_cov_4.475556_g36685_i0 PRJNA560932 37041 298 4.475556 13.33715688 Fungi 4751 Fungi Fungi 121 7.489999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g36685 i0 84.252 8.74496644295302 127 16 42 3 143 267 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2606 122 0.991803278688525 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
3681863 3681863 PRJNA560932_P_NODE_31403_length_323_cov_0.860000_g31047_i0 PRJNA560932 31403 323 0.86 2.7778 Fungi 4751 Fungi Fungi 296 1.27e-75   NTclustered gi|53829559|gb|AY582832.1| 64517 g31047 i0 85.714 88.6222910216718 280 40 87 0 38 317 333 612 Rhizophlyctis rosea strain CBS 57684 HSP70 gene, partial cds blastn 28625 298 0.993288590604027 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
4372073 4372073 PRJNA560932_P_NODE_32964_length_316_cov_0.950617_g32608_i0 PRJNA560932 32964 316 0.950617 3.00394972 Fimicolochytrium jonesii 1396493 Fungi Fungi 167 1.01e-36   NTclustered gi|2432101286|ref|XM_053071357.1| 1396493 g32608 i0 84 52.379746835443 175 26 55 2 53 226 350 523 Fimicolochytrium jonesii ribosomal protein L22/L17 (EV422DRAFT_543881), mRNA blastn 16552 167 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
4372183 4372183 PRJNA560932_P_NODE_46744_length_267_cov_1.463918_g46388_i0 PRJNA560932 46744 267 1.463918 3.90866106 Oedogoniomyces sp. CR84 252682 Fungi Fungi 403 5.8499999999999995e-108   NTclustered gi|82398509|gb|DQ273804.1| 252682 g46388 i0 94.007 102.067415730337 267 14 100 2 1 267 23 287 Oedogoniomyces sp. CR84 isolate AFTOL-ID 298 28S ribosomal RNA gene, partial sequence blastn 27252 403 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Oedogoniomycetaceae Oedogoniomyces Oedogoniomyces sp. CR84
4372247 4372247 PRJNA560932_P_NODE_55384_length_249_cov_0.875000_g55028_i0 PRJNA560932 55384 249 0.875 2.17875 Polychytrium aggregatum 110093 Fungi Fungi 165 2.77e-36   NTclustered gi|2432140094|ref|XM_053107518.1| 110093 g55028 i0 84.431 4.79919678714859 167 26 67 0 35 201 281 115 Polychytrium aggregatum tRNA synthetases class I (M)-domain-containing protein (BJ171DRAFT_421983), partial mRNA blastn 1195 165 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
5648365 5648365 PRJNA560932_P_NODE_20605_length_388_cov_2.120635_g20249_i0 PRJNA560932 20605 388 2.120635 8.2280638 Fimicolochytrium jonesii 1396493 Fungi Fungi 202 3.48e-47   NTclustered gi|2432072949|ref|XM_053073468.1| 1396493 g20249 i0 81.707 65.2319587628866 246 41 63 4 145 388 659 416 Fimicolochytrium jonesii ubiquitin-related domain-containing protein (EV422DRAFT_586682), mRNA blastn 25310 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
5648452 5648452 PRJNA560932_P_NODE_30665_length_326_cov_1.335968_g30309_i0 PRJNA560932 30665 326 1.335968 4.35525568 Spizellomyces punctatus 109760 Fungi Fungi 86.1 3.02e-12   NTclustered gi|1026965520|ref|XM_016751085.1| 645134 g30309 i0 82.474 1.03067484662577 97 17 30 0 224 320 1936 1840 Spizellomyces punctatus DAOM BR117 ABC transporter E family member 2 (SPPG_02799), mRNA blastn 336 86.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
8197619 8197619 PRJNA560932_P_NODE_39667_length_289_cov_1.199074_g39311_i0 PRJNA560932 39667 289 1.199074 3.46532386 Fimicolochytrium jonesii 1396493 Fungi Fungi 215 3.22e-51   NTclustered gi|2432068401|ref|XM_053067777.1| 1396493 g39311 i0 81.961 0.882352941176471 255 44 88 2 35 288 2147 1894 Fimicolochytrium jonesii uncharacterized protein (EV422DRAFT_494864), partial mRNA blastn 255 215 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
9473373 9473373 PRJNA560932_P_NODE_55748_length_249_cov_0.875000_g55392_i0 PRJNA560932 55748 249 0.875 2.17875 Polychytrium aggregatum 110093 Fungi Fungi 134 7.82e-27   NTclustered gi|2432140652|ref|XM_053113240.1| 110093 g55392 i0 78.365 29.7590361445783 208 43 83 2 35 241 858 652 Polychytrium aggregatum fructose-bisphosphate aldolase (BJ171DRAFT_561657), mRNA blastn 7410 134 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9473391 9473391 PRJNA560932_P_NODE_57888_length_247_cov_0.885057_g57532_i0 PRJNA560932 57888 247 0.885057 2.18609079 Polychytrium aggregatum 110093 Fungi Fungi 176 1.27e-39   NTclustered gi|2432132579|ref|XM_053106383.1| 110093 g57532 i0 80 66.5951417004049 240 46 97 2 9 247 481 719 Polychytrium aggregatum heat shock protein 70 family (BJ171DRAFT_212372), mRNA blastn 16449 176 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
10749089 10749089 PRJNA560932_P_NODE_50369_length_255_cov_1.994505_g50013_i0 PRJNA560932 50369 255 1.994505 5.08598775 Spizellomyces punctatus 109760 Fungi Fungi 110 1.36e-19   NTclustered gi|1026970659|ref|XM_016751545.1| 645134 g50013 i0 75.806 4.66274509803922 248 43 91 10 4 236 619 374 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S13 (SPPG_03270), mRNA blastn 1189 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
14573472 14573472 PRJNA560932_P_NODE_20852_length_386_cov_1.575080_g20496_i0 PRJNA560932 20852 386 1.57508 6.0798088 Polychytrium aggregatum 110093 Fungi Fungi 303 9.21e-78   NTclustered gi|2432130198|ref|XM_053115874.1| 110093 g20496 i0 80.879 83.0362694300518 387 72 100 2 1 386 980 1365 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_7386), mRNA blastn 32052 303 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14573481 14573481 PRJNA560932_P_NODE_21972_length_377_cov_1.763158_g21616_i0 PRJNA560932 21972 377 1.763158 6.64710566 Polychytrium aggregatum 110093 Fungi Fungi 270 9.11e-68   NTclustered gi|2432131711|ref|XM_053109357.1| 110093 g21616 i0 88.106 60.2732095490716 227 27 60 0 151 377 568 342 Polychytrium aggregatum calmodulin (BJ171DRAFT_488251), mRNA blastn 22723 270 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
15847356 15847356 PRJNA560932_P_NODE_19553_length_398_cov_1.421538_g19197_i0 PRJNA560932 19553 398 1.421538 5.65772124 Polychytrium aggregatum 110093 Fungi Fungi 298 4.43e-76   NTclustered gi|2432131711|ref|XM_053109357.1| 110093 g19197 i0 80.253 97.6381909547739 395 78 99 0 1 395 512 118 Polychytrium aggregatum calmodulin (BJ171DRAFT_488251), mRNA blastn 38860 298 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17122612 17122612 PRJNA560932_P_NODE_8054_length_611_cov_4.804833_g7701_i0 PRJNA560932 8054 611 4.804833 29.35752963 Spizellomyces punctatus 109760 Fungi Fungi 252 5.56e-62   NTclustered gi|1026980085|ref|XM_016752373.1| 645134 g7701 i0 80.606 6.29296235679214 330 61 54 3 95 423 508 181 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S15 (SPPG_04127), mRNA blastn 3845 252 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
18396611 18396611 PRJNA560932_P_NODE_43495_length_277_cov_1.465686_g43139_i0 PRJNA560932 43495 277 1.465686 4.05995022 Fimicolochytrium jonesii 1396493 Fungi Fungi 187 6.699999999999998e-43   NTclustered gi|2432049696|ref|XM_053069059.1| 1396493 g43139 i0 86.628 4.77256317689531 172 19 61 4 108 277 612 443 Fimicolochytrium jonesii ribosomal protein S6e-domain-containing protein (EV422DRAFT_512164), mRNA blastn 1322 187 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
20947072 20947072 PRJNA560932_P_NODE_7277_length_641_cov_2.135563_g6925_i0 PRJNA560932 7277 641 2.135563 13.68895883 Polychytrium aggregatum 110093 Fungi Fungi 370 1.55e-97   NTclustered gi|2432152064|ref|XM_053105682.1| 110093 g6925 i0 79.121 79.0171606864275 546 106 85 7 61 602 653 112 Polychytrium aggregatum ribosomal protein L10e/L16 (BJ171DRAFT_137240), mRNA blastn 50650 370 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22221891 22221891 PRJNA560932_P_NODE_57418_length_248_cov_0.880000_g57062_i0 PRJNA560932 57418 248 0.88 2.1824 Synchytrium microbalum 1806994 Fungi Fungi 196 9.79e-46   NTclustered gi|1759163879|ref|XM_031171368.1| 1806994 g57062 i0 81.702 95.7943548387097 235 43 95 0 12 246 78 312 Synchytrium microbalum uncharacterized protein (SmJEL517_g05442), partial mRNA blastn 23757 196 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;