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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA560932 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1820245 1820245 PRJNA560932_P_NODE_23002_length_369_cov_15.807432_g22646_i0 PRJNA560932 23002 369 15.807432 58.32942408 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 320 8.709999999999998e-83   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g22646 i0 83.288 53.6585365853659 371 39 99 16 3 369 4020 3669 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19800 320 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
6922767 6922767 PRJNA560932_P_NODE_50766_length_254_cov_1.662983_g50410_i0 PRJNA560932 50766 254 1.662983 4.22397682 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 350 7.3e-92   NTclustered gi|88792583|gb|DQ386164.1| 372086 g50410 i0 91.221 56.251968503937 262 15 100 1 1 254 2210 1949 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 14288 350 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
10748788 10748788 PRJNA560932_P_NODE_14209_length_464_cov_2.982097_g13854_i0 PRJNA560932 14209 464 2.982097 13.83693008 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 632 1.2699999999999995e-176   NTclustered gi|238617605|gb|FJ973380.1| 45107 g13854 i0 91.361 100.159482758621 463 39 99 1 1 463 1581 1120 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 46474 632 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
13298789 13298789 PRJNA560932_P_NODE_46591_length_268_cov_0.774359_g46235_i0 PRJNA560932 46591 268 0.774359 2.07528212 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 230 1.0599999999999998e-55   NTclustered gi|300676750|gb|GQ377668.1| 45107 g46235 i0 82.443 86.4029850746269 262 46 98 0 7 268 638 899 Heteromita globosa actin gene, partial cds blastn 23156 230 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
14573674 14573674 PRJNA560932_P_NODE_43572_length_277_cov_1.132353_g43216_i0 PRJNA560932 43572 277 1.132353 3.13661781 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 309 1.3700000000000003e-79   NTclustered gi|302026186|gb|GQ377653.1| 646463 g43216 i0 87.594 84.9819494584838 266 33 96 0 9 274 514 249 Gymnophrys sp. ATCC 50923 HSP90 gene, partial cds blastn 23540 309 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
15158560 15158560 PRJNA560932_P_NODE_13912_length_469_cov_2.083333_g13557_i0 PRJNA560932 13912 469 2.083333 9.77083177 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 854 0   NTclustered gi|319659368|gb|GU320605.1| 943207 g13557 i0 99.574 99.6396588486141 469 1 100 1 1 469 1345 1812 Reticulamoeba sp. COHH 9 18S ribosomal RNA gene, partial sequence blastn 46731 854 1 Eukaryota Sar   Cercozoa       Reticulamoeba Reticulamoeba sp. COHH 9
15847401 15847401 PRJNA560932_P_NODE_23713_length_364_cov_3.608247_g23357_i0 PRJNA560932 23713 364 3.608247 13.13401908 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 407 6.399999999999999e-109   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g23357 i0 87.293 50.3406593406593 362 39 99 6 1 360 3666 4022 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18324 407 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
15847698 15847698 PRJNA560932_P_NODE_60313_length_245_cov_2.848837_g59957_i0 PRJNA560932 60313 245 2.848837 6.97965065 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 311 3.3000000000000003e-80   NTclustered gi|238617602|gb|FJ973377.1| 188950 g59957 i0 89.683 113.224489795918 252 15 100 10 1 245 2674 2921 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 27740 311 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19671396 19671396 PRJNA560932_P_NODE_7276_length_641_cov_2.184859_g6924_i0 PRJNA560932 7276 641 2.184859 14.00494619 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 649 0   NTclustered gi|238617670|gb|FJ973414.1| 646463 g6924 i0 91.793 79.5304212168487 463 38 72 0 179 641 1 463 Gymnophrys sp. ATCC 50923 alpha-tubulin (atub) gene, partial cds blastn 50979 649 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
20946670 20946670 PRJNA560932_P_NODE_19257_length_401_cov_1.771341_g18901_i0 PRJNA560932 19257 401 1.771341 7.10307741 Cercomonas sp. HFCC53 458867 SAR_Eukaryotes SAR_Eukaryotes 719 0   NTclustered gi|161015705|gb|EF681939.1| 458867 g18901 i0 99.002 27.2643391521197 401 4 100 0 1 401 628 228 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 10933 719 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
21532555 21532555 PRJNA560932_P_NODE_38777_length_292_cov_1.059361_g38421_i0 PRJNA560932 38777 292 1.059361 3.09333412 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 219 2.52e-52   NTclustered gi|15216730|gb|AF363539.1| 45113 g38421 i0 86.139 69.4623287671233 202 28 69 0 91 292 732 531 Cercomonas sp. ATCC 50319 actin (act) gene, partial cds blastn 20283 219 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50319
22221689 22221689 PRJNA560932_P_NODE_28658_length_335_cov_4.927481_g28302_i0 PRJNA560932 28658 335 4.927481 16.50706135 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 593 4.189999999999999e-165   NTclustered gi|512134091|gb|KC575315.1| 175275 g28302 i0 98.799 99.865671641791 333 4 99 0 1 333 54 386 Uncultured cercozoan clone A.3.2 18S ribosomal RNA gene, partial sequence blastn 33455 593 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
23497097 23497097 PRJNA560932_P_NODE_45039_length_272_cov_1.713568_g44683_i0 PRJNA560932 45039 272 1.713568 4.66090496 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 243 1.38e-59   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g44683 i0 83.696 16.8125 276 25 100 11 1 272 3752 4011 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4573 243 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
24770756 24770756 PRJNA560932_P_NODE_15120_length_451_cov_1.415344_g14765_i0 PRJNA560932 15120 451 1.415344 6.38320144 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 813 0   NTclustered gi|238617630|gb|FJ973394.1| 188950 g14765 i0 99.332 90.7671840354767 449 3 99 0 3 451 725 277 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 40936 813 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;