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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA560932 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
544480 544480 PRJNA560932_P_NODE_1921_length_1149_cov_2.377323_g1718_i0 PRJNA560932 1921 1149 2.377323 27.31544127 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.009   NTclustered gi|915003962|ref|XM_013393818.1| 5801 g1718 i0 100 0.0261096605744125 30 0 3 0 722 751 204 233 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 30 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
1820528 1820528 PRJNA560932_P_NODE_60822_length_245_cov_0.895349_g60466_i0 PRJNA560932 60822 245 0.895349 2.19360505 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|915132157|ref|XM_013480233.1| 5804 g60466 i0 94.118 0.138775510204082 34 2 14 0 207 240 3050 3017 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 34 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
4371964 4371964 PRJNA560932_P_NODE_22324_length_375_cov_0.976821_g21968_i0 PRJNA560932 22324 375 0.976821 3.66307875 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|1620175562|ref|XM_028683273.1| 880535 g21968 i0 100 0.0773333333333333 29 0 8 0 69 97 2955 2927 Plasmodium sp. gorilla clade G2 vacuolar transporter chaperone,putative (PADL01_1230800), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
4372384 4372384 PRJNA560932_P_NODE_9844_length_555_cov_2.400415_g9490_i0 PRJNA560932 9844 555 2.400415 13.32230325 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 453 1.2800000000000002e-122   NTclustered gi|1673120333|ref|XM_029366196.1| 94643 g9490 i0 81.588 97.6594594594595 554 96 99 6 5 555 818 268 Besnoitia besnoiti alpha tubulin TUBA1 (BESB_078340), partial mRNA blastn 54201 453 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
5648368 5648368 PRJNA560932_P_NODE_20825_length_386_cov_2.111821_g20469_i0 PRJNA560932 20825 386 2.111821 8.15162906 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.037   NTclustered gi|2795620842|ref|XM_068064451.1| 483139 g20469 i0 100 0.0725388601036269 28 0 7 0 324 351 243 216 Cystoisospora suis dna chr wayne state university expressed family (CSUI_004258), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
8783462 8783462 PRJNA560932_P_NODE_4127_length_839_cov_3.634465_g3831_i0 PRJNA560932 4127 839 3.634465 30.49316135 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 632 2.369999999999999e-176   NTclustered gi|260232275|dbj|AK318274.1| 5811 g3831 i0 81.156 91.4469606674613 796 142 94 8 3 794 1057 266 Toxoplasma gondii cDNA, clone: XTG09340.2, full cDNA, XTG Sugano cDNA library blastn 76724 632 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
10748966 10748966 PRJNA560932_P_NODE_3429_length_910_cov_27.764636_g3154_i0 PRJNA560932 3429 910 27.764636 252.6581876 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.007   NTclustered gi|1620114090|ref|XM_028670209.1| 5849 g3154 i0 92.5 0.043956043956044 40 1 4 2 829 866 683 722 Plasmodium gallinaceum conserved Plasmodium protein, unknown function (PGAL8A_00386700), partial mRNA blastn 40 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
11333676 11333676 PRJNA560932_P_NODE_13389_length_478_cov_1.876543_g13035_i0 PRJNA560932 13389 478 1.876543 8.96987554 root 1 Root_unresolved Root_unresolved 52.8 0.047   NTclustered gi|1085011886|ref|XM_018781301.1| 508771 g13035 i0 100 0.117154811715481 28 0 6 0 156 183 591 564 Toxoplasma gondii ME49 peptidase family c50 protein partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
12023877 12023877 PRJNA560932_P_NODE_53070_length_251_cov_0.865169_g52714_i0 PRJNA560932 53070 251 0.865169 2.17157419 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 292 1.2299999999999999e-74   NTclustered gi|1620123653|ref|XM_028672625.1| 5849 g52714 i0 87.698 18 252 29 100 2 1 251 1022 772 Plasmodium gallinaceum 26S protease regulatory subunit 6a, putative (RPT5), partial mRNA blastn 4518 292 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
13298734 13298734 PRJNA560932_P_NODE_39491_length_289_cov_2.018519_g39135_i0 PRJNA560932 39491 289 2.018519 5.83351991 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 95.3 4.38e-15   NTclustered gi|915123216|ref|XM_013477418.1| 5804 g39135 i0 87.805 19.2595155709343 82 8 30 2 1 81 1224 1304 Eimeria maxima hypothetical protein partial mRNA blastn 5566 95.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
15847577 15847577 PRJNA560932_P_NODE_43513_length_277_cov_1.392157_g43157_i0 PRJNA560932 43513 277 1.392157 3.85627489 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 71.3 7.04e-8   NTclustered gi|916504977|ref|XM_013497651.1| 44415 g43157 i0 93.617 1.55956678700361 47 3 17 0 206 252 3399 3445 Eimeria mitis uncharacterized protein (EMH_0059160), partial mRNA blastn 432 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
15847666 15847666 PRJNA560932_P_NODE_54033_length_250_cov_0.870056_g53677_i0 PRJNA560932 54033 250 0.870056 2.17514 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.35e-4   NTclustered gi|915001478|ref|XM_013393039.1| 5801 g53677 i0 100 0.128 32 0 13 0 181 212 144 175 Eimeria acervulina hypothetical protein partial mRNA blastn 32 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
16433260 16433260 PRJNA560932_P_NODE_45493_length_271_cov_1.237374_g45137_i0 PRJNA560932 45493 271 1.237374 3.35328354 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|916498807|ref|XM_013494769.1| 44415 g45137 i0 92.308 0.542435424354244 39 3 14 0 104 142 309 347 Eimeria mitis uncharacterized protein (EMH_0090460), partial mRNA blastn 147 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
19671166 19671166 PRJNA560932_P_NODE_36236_length_302_cov_1.323144_g35880_i0 PRJNA560932 36236 302 1.323144 3.99589488 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|915139101|ref|XM_013481635.1| 5804 g35880 i0 100 0.0927152317880795 28 0 9 0 248 275 389 362 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
22807672 22807672 PRJNA560932_P_NODE_18998_length_404_cov_0.930514_g18642_i0 PRJNA560932 18998 404 0.930514 3.75927656 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.011   NTclustered gi|915001192|ref|XM_013392965.1| 5801 g18642 i0 100 1.66831683168317 29 0 7 0 205 233 143 171 Eimeria acervulina DNA-directed RNA polymerase, related partial mRNA blastn 674 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
24082474 24082474 PRJNA560932_P_NODE_30959_length_325_cov_0.916667_g30603_i0 PRJNA560932 30959 325 0.916667 2.97916775 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.031   NTclustered gi|915129098|ref|XM_013479538.1| 5804 g30603 i0 100 0.172307692307692 28 0 9 0 34 61 2543 2516 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
24082476 24082476 PRJNA560932_P_NODE_3319_length_924_cov_2.351351_g3046_i0 PRJNA560932 3319 924 2.351351 21.72648324 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.002   NTclustered gi|8468620|gb|AF270648.1|AF270648 5833 g3046 i0 100 0.635281385281385 31 0 3 0 418 448 3345 3375 Plasmodium falciparum mature parasite-infected erythrocyte surface antigen (MESA) gene, complete cds blastn 587 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;