contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5648416 | 5648416 | PRJNA560932_P_NODE_26385_length_348_cov_1.294545_g26029_i0 | PRJNA560932 | 26385 | 348 | 1.294545 | 4.5050166 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 202 | 3.09e-47 | NTclustered | gi|2893358426|emb|OZ220718.1| | 2910147 | g26029 | i0 | 80.899 | 1.47701149425287 | 267 | 41 | 75 | 10 | 85 | 346 | 1182312 | 1182573 | MAG: Vicinamibacterales bacterium isolate 0ce2d42f-2bf0-44bc-a671-070680eb922c genome assembly, chromosome: 1 | blastn | 514 | 202 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 10749223 | 10749223 | PRJNA560932_P_NODE_8389_length_600_cov_1.409867_g8036_i0 | PRJNA560932 | 8389 | 600 | 1.409867 | 8.459202 | Bryobacterales bacterium | 2026791 | Bacteria | Bacteria | 640 | 9.96e-179 | NTclustered | gi|2874253826|emb|OY969810.1| | 2026791 | g8036 | i0 | 86.134 | 95.8866666666667 | 613 | 62 | 99 | 18 | 2 | 600 | 6659280 | 6659883 | MAG: Bryobacterales bacterium isolate MFD04967.bin.c.1 genome assembly, chromosome: 1 | blastn | 57532 | 640 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium | ||||
| 12023785 | 12023785 | PRJNA560932_P_NODE_39130_length_290_cov_2.327189_g38774_i0 | PRJNA560932 | 39130 | 290 | 2.327189 | 6.7488481 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 316 | 8.62e-82 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g38774 | i0 | 86.644 | 112.413793103448 | 292 | 32 | 99 | 4 | 2 | 290 | 4840555 | 4840842 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 32600 | 316 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 13298879 | 13298879 | PRJNA560932_P_NODE_61171_length_245_cov_0.895349_g60815_i0 | PRJNA560932 | 61171 | 245 | 0.895349 | 2.19360505 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 263 | 9.38e-66 | NTclustered | gi|2893358397|emb|OZ220688.1| | 2651171 | g60815 | i0 | 91.579 | 78.8938775510204 | 190 | 16 | 78 | 0 | 53 | 242 | 997214 | 997025 | MAG: Thermoanaerobaculia bacterium isolate 17c936d4-adfa-4882-ba3e-7fd0bc385902 genome assembly, chromosome: 1 | blastn | 19329 | 263 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 13884412 | 13884412 | PRJNA560932_P_NODE_48931_length_260_cov_1.524064_g48575_i0 | PRJNA560932 | 48931 | 260 | 1.524064 | 3.9625664 | Bacteria | 2 | Bacteria | Bacteria | 436 | 5.600000000000001e-118 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g48575 | i0 | 96.923 | 159.184615384615 | 260 | 8 | 100 | 0 | 1 | 260 | 4841526 | 4841785 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 41388 | 436 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 14573639 | 14573639 | PRJNA560932_P_NODE_38952_length_291_cov_1.412844_g38596_i0 | PRJNA560932 | 38952 | 291 | 1.412844 | 4.11137604 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 464 | 2.9199999999999998e-126 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g38596 | i0 | 95.517 | 107.264604810997 | 290 | 13 | 99 | 0 | 1 | 290 | 3556780 | 3556491 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 31214 | 464 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 15847648 | 15847648 | PRJNA560932_P_NODE_52113_length_251_cov_0.865169_g51757_i0 | PRJNA560932 | 52113 | 251 | 0.865169 | 2.17157419 | Vicinamibacteria bacterium | 2793154 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2893358421|emb|OZ220713.1| | 2793154 | g51757 | i0 | 96.774 | 0.123505976095618 | 31 | 1 | 12 | 0 | 103 | 133 | 3112837 | 3112807 | MAG: Vicinamibacteria bacterium isolate f5636fb4-303b-4095-abf0-868cc3675b90 genome assembly, chromosome: 1 | blastn | 31 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacteria bacterium | |||||
| 18396546 | 18396546 | PRJNA560932_P_NODE_35655_length_304_cov_1.813853_g35299_i0 | PRJNA560932 | 35655 | 304 | 1.813853 | 5.51411312 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 375 | 1.48e-99 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g35299 | i0 | 89.251 | 128.644736842105 | 307 | 24 | 100 | 9 | 1 | 304 | 655015 | 654715 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 39108 | 375 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 18396665 | 18396665 | PRJNA560932_P_NODE_50175_length_256_cov_1.409836_g49819_i0 | PRJNA560932 | 50175 | 256 | 1.409836 | 3.60918016 | Holophagales bacterium | 2478486 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1958024485|gb|CP064972.1| | 2478486 | g49819 | i0 | 100 | 0.109375 | 28 | 0 | 11 | 0 | 163 | 190 | 1857101 | 1857074 | Holophagales bacterium isolate EsbW_18-Q3-R4-48_BAT3C.4_cln chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagales bacterium | ||||
| 19671366 | 19671366 | PRJNA560932_P_NODE_64876_length_242_cov_1.230769_g64520_i0 | PRJNA560932 | 64876 | 242 | 1.230769 | 2.97846098 | Geothrix sp. 21YS21S-2 | 3068893 | Bacteria | Bacteria | 171 | 5.77e-38 | NTclustered | gi|2566094019|gb|CP132910.1| | 3068893 | g64520 | i0 | 79.668 | 56.9504132231405 | 241 | 46 | 99 | 3 | 2 | 242 | 3374396 | 3374633 | Geothrix sp. 21YS21S-2 chromosome, complete genome | blastn | 13782 | 171 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. 21YS21S-2 | ||
| 24771013 | 24771013 | PRJNA560932_P_NODE_46420_length_268_cov_1.533333_g46064_i0 | PRJNA560932 | 46420 | 268 | 1.533333 | 4.10933244 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 305 | 1.71e-78 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g46064 | i0 | 87.5 | 139.160447761194 | 264 | 33 | 99 | 0 | 5 | 268 | 3559054 | 3559317 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 37295 | 305 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;