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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA560932 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3095822 3095822 PRJNA560932_P_NODE_64263_length_243_cov_0.905882_g63907_i0 PRJNA560932 64263 243 0.905882 2.20129326 Archaeoglobus sulfaticallidus 1316941 Archaea Archaea 52.8 0.022   NTclustered gi|484591393|gb|CP005290.1| 387631 g63907 i0 100 0.11522633744856 28 0 12 0 185 212 1753892 1753865 Archaeoglobus sulfaticallidus PM70-1, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus Archaeoglobus sulfaticallidus
5648709 5648709 PRJNA560932_P_NODE_6725_length_666_cov_1.974705_g6374_i0 PRJNA560932 6725 666 1.974705 13.1515353 Halorussus vallis 2953749 Archaea Archaea 56.5 0.005   NTclustered gi|2263966384|gb|CP100000.1| 2953749 g6374 i0 100 0.045045045045045 30 0 5 0 100 129 2043996 2044025 Halorussus vallis strain XZYJT10 chromosome, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus vallis
6922461 6922461 PRJNA560932_P_NODE_16466_length_433_cov_1.188889_g16110_i0 PRJNA560932 16466 433 1.188889 5.14788937 Halobaculum sp. CBA1158 2904243 Archaea Archaea 54.7 0.012   NTclustered gi|2176093559|gb|CP090371.1| 2904243 g16110 i0 92.308 0.0900692840646651 39 1 9 2 163 201 2507481 2507445 Halobaculum sp. CBA1158 chromosome, complete genome blastn 39 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum sp. CBA1158
6922801 6922801 PRJNA560932_P_NODE_54846_length_249_cov_1.295455_g54490_i0 PRJNA560932 54846 249 1.295455 3.22568295 Natronorarus salvus 3117733 Archaea Archaea 56.5 0.002   NTclustered gi|2670420129|gb|CP144125.1| 3117733 g54490 i0 100 0.120481927710843 30 0 12 0 41 70 1818078 1818107 Natronorarus salvus strain CGA53 chromosome, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halalkalicoccaceae Natronorarus Natronorarus salvus
10749163 10749163 PRJNA560932_P_NODE_61429_length_245_cov_0.895349_g61073_i0 PRJNA560932 61429 245 0.895349 2.19360505 Halobacterium wangiae 2902623 Archaea Archaea 52.8 0.022   NTclustered gi|2168769890|gb|CP089588.1| 2902623 g61073 i0 100 0.114285714285714 28 0 11 0 96 123 2598188 2598161 Halobacterium wangiae strain Gai3-17 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium wangiae
13298656 13298656 PRJNA560932_P_NODE_29531_length_331_cov_1.399225_g29175_i0 PRJNA560932 29531 331 1.399225 4.63143475 Natronosalvus caseinilyticus 2953747 Archaea Archaea 52.8 0.031   NTclustered gi|2006550273|gb|CP071596.1| 2953747 g29175 i0 100 0.0845921450151057 28 0 8 0 120 147 1765254 1765227 Natronosalvus caseinilyticus strain KZCA101 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronosalvus Natronosalvus caseinilyticus
19671416 19671416 PRJNA560932_P_NODE_8756_length_588_cov_1.285437_g8403_i0 PRJNA560932 8756 588 1.285437 7.55836956 Thermococcus indicus 2586643 Archaea Archaea 60.2 3.47e-4   NTclustered gi|1681065834|gb|CP040846.1| 2586643 g8403 i0 94.737 0.0646258503401361 38 2 6 0 5 42 1809298 1809335 Thermococcus indicus strain IOH1 chromosome, complete genome blastn 38 60.2 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus indicus
23496999 23496999 PRJNA560932_P_NODE_32799_length_316_cov_1.983539_g32443_i0 PRJNA560932 32799 316 1.983539 6.26798324 Thermococcus indicus 2586643 Archaea Archaea 58.4 6.36e-4   NTclustered gi|1681065834|gb|CP040846.1| 2586643 g32443 i0 94.595 0.117088607594937 37 2 12 0 280 316 1809298 1809334 Thermococcus indicus strain IOH1 chromosome, complete genome blastn 37 58.4 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus indicus
23497051 23497051 PRJNA560932_P_NODE_38559_length_293_cov_0.986364_g38203_i0 PRJNA560932 38559 293 0.986364 2.89004652 Natrialba magadii 13769 Archaea Archaea 52.8 0.027   NTclustered gi|289532809|gb|CP001933.1| 547559 g38203 i0 100 0.0955631399317406 28 0 10 0 215 242 272225 272252 Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba magadii
24771121 24771121 PRJNA560932_P_NODE_61580_length_245_cov_0.895349_g61224_i0 PRJNA560932 61580 245 0.895349 2.19360505 uncultured Methanoregulaceae archaeon 1392423 Archaea Archaea 62.1 3.67e-5   NTclustered gi|2874254037|emb|OY970361.1| 1392423 g61224 i0 100 0.371428571428571 33 0 13 0 39 71 946034 946066 MAG: uncultured Methanoregulaceae archaeon isolate MFD01476.bin.2.40 genome assembly, chromosome: 1 blastn 91 62.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   uncultured Methanoregulaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;