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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 31 ✖

bioproject 1

  • PRJNA560932 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
544424 544424 PRJNA560932_P_NODE_14581_length_458_cov_8.145455_g14226_i0 PRJNA560932 14581 458 8.145455 37.3061839 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.012   NTclustered gi|2082256237|ref|XM_043066549.1| 3055 g14226 i0 100 0.0633187772925764 29 0 6 0 24 52 1399 1371 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g425700v5), mRNA blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
544557 544557 PRJNA560932_P_NODE_27121_length_344_cov_1.254613_g26765_i0 PRJNA560932 27121 344 1.254613 4.31586872 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.033   NTclustered gi|2082250453|ref|XM_001690409.2| 3055 g26765 i0 100 0.0813953488372093 28 0 8 0 317 344 177 204 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g328350v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1130580 1130580 PRJNA560932_P_NODE_34941_length_307_cov_1.564103_g34585_i0 PRJNA560932 34941 307 1.564103 4.80179621 Eukaryota 2759 Plants Plants 241 5.7e-59   NTclustered gi|74272614|gb|DQ122872.1| 51695 g34585 i0 82.253 50.8827361563518 293 39 93 11 6 290 410 123 Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product blastn 15621 243 0.991769547325103 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
1820313 1820313 PRJNA560932_P_NODE_30062_length_329_cov_0.925781_g29706_i0 PRJNA560932 30062 329 0.925781 3.04581949 Chlamydomonas reinhardtii 3055 Plants Plants 322 2.14e-83   NTclustered gi|2082244282|ref|XM_001703058.2| 3055 g29706 i0 86.806 100.61094224924 288 38 88 0 1 288 850 563 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g216850v5), mRNA blastn 33101 322 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1820339 1820339 PRJNA560932_P_NODE_3342_length_922_cov_2.058893_g3069_i0 PRJNA560932 3342 922 2.058893 18.98299346 Chlamydomonas reinhardtii 3055 Plants Plants 75 1.99e-8   NTclustered gi|2082249509|ref|XM_043063769.1| 3055 g3069 i0 97.674 0.0466377440347072 43 1 5 0 10 52 5206 5164 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g309750v5), mRNA blastn 43 75 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1820543 1820543 PRJNA560932_P_NODE_62822_length_244_cov_0.900585_g62466_i0 PRJNA560932 62822 244 0.900585 2.1974274 Monoraphidium neglectum 145388 Plants Plants 139 1.64e-28   NTclustered gi|926777351|ref|XM_014041696.1| 145388 g62466 i0 78.947 8.0655737704918 209 40 85 4 38 244 210 4 Monoraphidium neglectum 60S ribosomal protein L38 mRNA blastn 1968 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
2405922 2405922 PRJNA560932_P_NODE_11782_length_508_cov_117.195402_g11428_i0 PRJNA560932 11782 508 117.195402 595.35264216 Eukaryota 2759 Plants Plants 933 0   NTclustered gi|1201359271|gb|MF040793.1| 3078 g11428 i0 99.803 100.46062992126 508 1 100 0 1 508 43 550 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 51034 933 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
2405945 2405945 PRJNA560932_P_NODE_28922_length_334_cov_1.475096_g28566_i0 PRJNA560932 28922 334 1.475096 4.92682064 Eukaryota 2759 Plants Plants 263 1.34e-65   NTclustered gi|2082238343|ref|XM_001701633.2| 3055 g28566 i0 82.828 85.1556886227545 297 48 88 2 38 331 869 573 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g080700v5), mRNA blastn 28442 263 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4371935 4371935 PRJNA560932_P_NODE_20444_length_390_cov_0.965300_g20088_i0 PRJNA560932 20444 390 0.9653 3.76467 Chlamydomonas reinhardtii 3055 Plants Plants 174 7.62e-39   NTclustered gi|2082261551|ref|XM_043068671.1| 3055 g20088 i0 79.297 61.7820512820513 256 47 65 6 92 344 2333 2585 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g537200v5), mRNA blastn 24095 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4372234 4372234 PRJNA560932_P_NODE_53564_length_250_cov_0.870056_g53208_i0 PRJNA560932 53564 250 0.870056 2.17514 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 4.87e-4   NTclustered gi|2082241165|ref|XM_043060395.1| 3055 g53208 i0 97.143 0.372 35 0 14 1 114 148 2364 2397 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g144747v5), mRNA blastn 93 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4958618 4958618 PRJNA560932_P_NODE_13704_length_472_cov_3.253133_g13349_i0 PRJNA560932 13704 472 3.253133 15.35478776 Eukaryota 2759 Plants Plants 331 5.27e-86   NTclustered gi|926781221|ref|XM_014043631.1| 145388 g13349 i0 82.292 66.8834745762712 384 66 81 2 48 430 383 1 Monoraphidium neglectum large subunit ribosomal protein L40e mRNA blastn 31569 333 0.993993993993994 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
5648729 5648729 PRJNA560932_P_NODE_7745_length_623_cov_2.921818_g7393_i0 PRJNA560932 7745 623 2.921818 18.20292614 Chlamydomonas reinhardtii 3055 Plants Plants 231 7.399999999999999e-56   NTclustered gi|2082256557|ref|XM_001702433.2| 3055 g7393 i0 80.528 30.3643659711075 303 57 48 2 3 304 526 827 Chlamydomonas reinhardtii ribosomal protein Sa (CHLRE_10g432800v5), mRNA blastn 18917 231 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8197345 8197345 PRJNA560932_P_NODE_11027_length_524_cov_2.682927_g10673_i0 PRJNA560932 11027 524 2.682927 14.05853748 Chlamydomonas reinhardtii 3055 Plants Plants 248 6.11e-61   NTclustered gi|2082260161|ref|XM_001690941.2| 3055 g10673 i0 81.518 33.5763358778626 303 54 58 2 165 466 257 558 Chlamydomonas reinhardtii ribosomal protein S23 (CHLRE_12g504200v5), mRNA blastn 17594 248 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10748896 10748896 PRJNA560932_P_NODE_26269_length_349_cov_0.757246_g25913_i0 PRJNA560932 26269 349 0.757246 2.64278854 Chlorella variabilis 554065 Plants Plants 171 8.72e-38   NTclustered gi|552825916|ref|XM_005846855.1| 554065 g25913 i0 86.164 16.9971346704871 159 20 45 2 147 304 234 77 Chlorella variabilis hypothetical protein (CHLNCDRAFT_134811) mRNA, complete cds blastn 5932 171 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
10748959 10748959 PRJNA560932_P_NODE_33189_length_315_cov_0.954545_g32833_i0 PRJNA560932 33189 315 0.954545 3.00681675 Monoraphidium neglectum 145388 Plants Plants 58.4 6.34e-4   NTclustered gi|926781971|ref|XM_014044006.1| 145388 g32833 i0 94.595 0.215873015873016 37 2 12 0 82 118 792 756 Monoraphidium neglectum hypothetical protein mRNA blastn 68 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
10749118 10749118 PRJNA560932_P_NODE_53849_length_250_cov_0.870056_g53493_i0 PRJNA560932 53849 250 0.870056 2.17514 Chlamydomonas reinhardtii 3055 Plants Plants 95.3 3.71e-15   NTclustered gi|2082243583|ref|XM_001693123.2| 3055 g53493 i0 79.31 1.904 145 22 56 6 83 223 235 95 Chlamydomonas reinhardtii ribosomal protein L29 (CHLRE_03g207050v5), mRNA blastn 476 95.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13298482 13298482 PRJNA560932_P_NODE_10511_length_538_cov_1.055914_g10157_i0 PRJNA560932 10511 538 1.055914 5.68081732 Auxenochlorella protothecoides 3075 Plants Plants 364 5.979999999999999e-96   NTclustered gi|760449306|ref|XM_011403420.1| 3075 g10157 i0 79.724 39.8791821561338 508 99 94 4 3 508 649 1154 Auxenochlorella protothecoides 26S protease regulatory subunit 6B-like protein partial mRNA blastn 21455 364 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
14573649 14573649 PRJNA560932_P_NODE_39812_length_288_cov_2.148837_g39456_i0 PRJNA560932 39812 288 2.148837 6.18865056 Chlamydomonas reinhardtii 3055 Plants Plants 228 4.119999999999999e-55   NTclustered gi|2082254042|ref|XM_001694416.2| 3055 g39456 i0 80.969 94.3020833333333 289 53 100 2 1 288 1718 1431 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g393200v5), mRNA blastn 27159 228 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15847598 15847598 PRJNA560932_P_NODE_45833_length_270_cov_1.274112_g45477_i0 PRJNA560932 45833 270 1.274112 3.4401024 Chlorella variabilis 554065 Plants Plants 54.7 0.007   NTclustered gi|552821274|ref|XM_005845741.1| 554065 g45477 i0 96.875 0.118518518518519 32 1 12 0 160 191 380 349 Chlorella variabilis hypothetical protein (CHLNCDRAFT_136526) mRNA, complete cds blastn 32 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
15847695 15847695 PRJNA560932_P_NODE_5973_length_703_cov_3.574603_g5633_i0 PRJNA560932 5973 703 3.574603 25.12945909 Chlamydomonas reinhardtii 3055 Plants Plants 342 3.72e-89   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g5633 i0 77.68 63.9061166429588 569 121 81 5 91 656 856 291 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 44926 342 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16433220 16433220 PRJNA560932_P_NODE_12713_length_490_cov_1.844125_g12359_i0 PRJNA560932 12713 490 1.844125 9.0362125 Monostromataceae 153902 Plants Plants 52.8 0.048   NTclustered gi|2473930131|ref|NC_072924.1| 138667 g12359 i0 100 0.114285714285714 28 0 6 0 68 95 85370 85397 Monostroma nitidum chloroplast, complete genome blastn 56 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Monostromataceae Monostroma Monostroma nitidum
17122586 17122586 PRJNA560932_P_NODE_66414_length_241_cov_0.916667_g66058_i0 PRJNA560932 66414 241 0.916667 2.20916747 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.022   NTclustered gi|2082243750|ref|XM_043061419.1| 3055 g66058 i0 100 0.116182572614108 28 0 12 0 165 192 1038 1011 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g203300v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18396609 18396609 PRJNA560932_P_NODE_43375_length_277_cov_2.058824_g43019_i0 PRJNA560932 43375 277 2.058824 5.70294248 Chlorella variabilis 554065 Plants Plants 161 4.06e-35   NTclustered gi|552830805|ref|XM_005847928.1| 554065 g43019 i0 80 2.46570397111913 225 39 80 6 56 277 682 461 Chlorella variabilis hypothetical protein (RACK1) mRNA, complete cds blastn 683 161 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
18396632 18396632 PRJNA560932_P_NODE_46775_length_267_cov_1.355670_g46419_i0 PRJNA560932 46775 267 1.35567 3.6196389 Chlamydomonas reinhardtii 3055 Plants Plants 60.2 1.46e-4   NTclustered gi|2082237132|ref|XM_001689609.2| 3055 g46419 i0 97.143 0.408239700374532 35 1 13 0 164 198 748 714 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g038400v5), mRNA blastn 109 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19671135 19671135 PRJNA560932_P_NODE_32636_length_317_cov_1.262295_g32280_i0 PRJNA560932 32636 317 1.262295 4.00147515 Chlamydomonas reinhardtii 3055 Plants Plants 117 1.04e-21   NTclustered gi|2082253493|ref|XM_043066154.1| 3055 g32280 i0 86.667 1.4794952681388 105 14 33 0 135 239 756 652 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g405106v5), mRNA blastn 469 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19671180 19671180 PRJNA560932_P_NODE_38096_length_294_cov_3.873303_g37740_i0 PRJNA560932 38096 294 3.873303 11.38751082 Chlamydomonas reinhardtii 3055 Plants Plants 252 2.51e-62   NTclustered gi|2082235498|ref|XM_001700320.2| 3055 g37740 i0 82.77 98.1666666666667 296 38 100 8 1 294 416 132 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g002300v5), mRNA blastn 28861 252 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
20257067 20257067 PRJNA560932_P_NODE_14916_length_454_cov_1.364829_g14561_i0 PRJNA560932 14916 454 1.364829 6.19632366 Chlorophyta 3041 Plants Plants 440 8.039999999999998e-119   NTclustered gi|760445070|ref|XM_011401302.1| 3075 g14561 i0 84.257 59.9118942731277 451 71 99 0 1 451 6623 6173 Auxenochlorella protothecoides Pre-mRNA-processing-splicing factor 8 partial mRNA blastn 27200 440 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
20946804 20946804 PRJNA560932_P_NODE_32757_length_317_cov_0.848361_g32401_i0 PRJNA560932 32757 317 0.848361 2.68930437 Chlamydomonas reinhardtii 3055 Plants Plants 237 7.64e-58   NTclustered gi|2082236188|ref|XM_043058392.1| 3055 g32401 i0 80.442 6.15772870662461 317 56 99 4 4 317 6082 5769 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g016050v5), mRNA blastn 1952 237 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24770744 24770744 PRJNA560932_P_NODE_14280_length_463_cov_3.746154_g13925_i0 PRJNA560932 14280 463 3.746154 17.34469302 Dunaliella tertiolecta 3047 Plants Plants 237 1.16e-57   NTclustered gi|534958|emb|X66036.1| 3047 g13925 i0 80 51.9308855291577 325 61 70 4 122 444 130 452 D.tertiolecta mRNA for S11 ribosomal protein blastn 24044 237 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella tertiolecta
24770904 24770904 PRJNA560932_P_NODE_31660_length_321_cov_2.391129_g31304_i0 PRJNA560932 31660 321 2.391129 7.67552409 Chlorella variabilis 554065 Plants Plants 267 9.88e-67   NTclustered gi|552844675|ref|XM_005851082.1| 554065 g31304 i0 84.249 79.98753894081 273 43 85 0 49 321 86 358 Chlorella variabilis alpha-tubulin (CHLNCDRAFT_33793) mRNA, complete cds blastn 25676 267 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
25356915 25356915 PRJNA560932_P_NODE_6580_length_672_cov_2.544240_g6232_i0 PRJNA560932 6580 672 2.54424 17.0972928 Chlorophyta 3041 Plants Plants 69.4 6.65e-7   NTclustered gi|1783497212|ref|NC_045363.1| 3190 g6232 i0 76.812 8.15178571428571 138 22 20 9 29 158 31508 31373 Scherffelia dubia culture SAG:17.86 mitochondrion, complete genome blastn 5478 69.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Scherffelia Scherffelia dubia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;