RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA560932" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA560932 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1820309 1820309 PRJNA560932_P_NODE_29202_length_333_cov_1.011538_g28846_i0 PRJNA560932 29202 333 1.011538 3.36842154 Thecamonas trahens 529818 Root_unresolved Root_unresolved 95.3 5.14e-15   NTclustered gi|923129792|ref|XM_013902908.1| 461836 g28846 i0 87.209 0.993993993993994 86 7 25 3 86 169 450 533 Thecamonas trahens ATCC 50062 Ras-like C3 botulinum toxin substrate 1 (AMSG_04690), mRNA blastn 331 95.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5648535 5648535 PRJNA560932_P_NODE_4245_length_828_cov_2.617219_g3943_i0 PRJNA560932 4245 828 2.617219 21.67057332 Thecamonas trahens 529818 Root_unresolved Root_unresolved 381 9.349999999999998e-101   NTclustered gi|923133140|ref|XM_013904582.1| 461836 g3943 i0 80.567 35.5978260869565 494 96 60 0 263 756 494 1 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_03185), partial mRNA blastn 29475 381 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6234168 6234168 PRJNA560932_P_NODE_63565_length_243_cov_0.905882_g63209_i0 PRJNA560932 63565 243 0.905882 2.20129326 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.5 1e-10   NTclustered gi|923128448|ref|XM_013902237.1| 461836 g63209 i0 89.231 11.3786008230453 65 6 27 1 122 186 1090 1153 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_05621), partial mRNA blastn 2765 80.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
6922443 6922443 PRJNA560932_P_NODE_1446_length_1269_cov_7.947324_g1285_i0 PRJNA560932 1446 1269 7.947324 100.85154156 Thecamonas trahens 529818 Root_unresolved Root_unresolved 110 7.59e-19   NTclustered gi|923121054|ref|XM_013898545.1| 461836 g1285 i0 80 0.442080378250591 150 28 12 2 138 286 3761 3909 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_09969), partial mRNA blastn 561 110 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12023899 12023899 PRJNA560932_P_NODE_5590_length_726_cov_2.145482_g5257_i0 PRJNA560932 5590 726 2.145482 15.57619932 Thecamonas trahens 529818 Root_unresolved Root_unresolved 309 3.9e-79   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g5257 i0 77.596 15.274104683195601 549 97 74 17 105 643 997 465 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 11089 309 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
20946720 20946720 PRJNA560932_P_NODE_24057_length_362_cov_1.498270_g23701_i0 PRJNA560932 24057 362 1.49827 5.4237374 Thecamonas trahens 529818 Root_unresolved Root_unresolved 95.3 5.62e-15   NTclustered gi|923122075|ref|XM_013899054.1| 461836 g23701 i0 83.838 13.8093922651934 99 16 27 0 1 99 1546 1644 Thecamonas trahens ATCC 50062 PL10b protein (AMSG_08727), partial mRNA blastn 4999 95.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
22221771 22221771 PRJNA560932_P_NODE_38878_length_291_cov_1.788991_g38522_i0 PRJNA560932 38878 291 1.788991 5.20596381 Thecamonas trahens 529818 Root_unresolved Root_unresolved 135 2.6e-27   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g38522 i0 80 24.5841924398625 200 26 65 10 1 190 393 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 7154 135 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;