contig_metadata
36 rows where analysis = "blastn", bioproject = "PRJNA560029" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 543857 | 543857 | PRJNA560029_S_NODE_22621_length_290_cov_3.129032_g22397_i0 | PRJNA560029 | 22621 | 290 | 3.129032 | 9.0741928 | Pseudoalteromonas xiamenensis | 882626 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2571540407|gb|CP099917.1| | 882626 | g22397 | i0 | 100 | 0.1 | 29 | 0 | 10 | 0 | 222 | 250 | 3671275 | 3671247 | Pseudoalteromonas xiamenensis strain PSDB chromosome 1, complete sequence | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Pseudoalteromonadaceae | Pseudoalteromonas | Pseudoalteromonas xiamenensis | ||
| 4371423 | 4371423 | PRJNA560029_S_NODE_27924_length_267_cov_1.881443_g27700_i0 | PRJNA560029 | 27924 | 267 | 1.881443 | 5.02345281 | Plesiomonas shigelloides | 703 | Bacteria | Bacteria | 494 | 3.38e-135 | NTclustered | gi|1913912090|gb|CP062197.1| | 703 | g27700 | i0 | 100 | 5 | 267 | 0 | 100 | 0 | 1 | 267 | 97177 | 96911 | Plesiomonas shigelloides strain P5462 plasmid p1, complete sequence | blastn | 1335 | 494 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Plesiomonas | Plesiomonas shigelloides | ||
| 6234049 | 6234049 | PRJNA560029_S_NODE_9665_length_370_cov_2.942761_g9441_i0 | PRJNA560029 | 9665 | 370 | 2.942761 | 10.8882157 | root | 1 | Root_unresolved | Root_unresolved | 678 | 0 | NTclustered | gi|857129904|gb|CP011230.1| | 730 | g9441 | i0 | 99.73 | 100.402702702703 | 370 | 1 | 100 | 0 | 1 | 370 | 1190693 | 1190324 | [Haemophilus] ducreyi strain DMC64 chromosome | blastn | 37149 | 678 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | [Haemophilus] ducreyi | ||
| 6921866 | 6921866 | PRJNA560029_S_NODE_22226_length_292_cov_2.168950_g22002_i0 | PRJNA560029 | 22226 | 292 | 2.16895 | 6.333334 | Haemophilus parainfluenzae | 729 | Bacteria | Bacteria | 484 | 2.2499999999999993e-132 | NTclustered | gi|1919211880|gb|CP063116.1| | 729 | g22002 | i0 | 97.213 | 93.0616438356164 | 287 | 7 | 98 | 1 | 6 | 292 | 1284432 | 1284147 | Haemophilus parainfluenzae strain M1C146_1 chromosome, complete genome | blastn | 27174 | 484 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus parainfluenzae | ||
| 6922019 | 6922019 | PRJNA560029_S_NODE_29306_length_262_cov_0.894180_g29082_i0 | PRJNA560029 | 29306 | 262 | 0.89418 | 2.3427516 | Pluralibacter gergoviae | 61647 | Bacteria | Bacteria | 479 | 9.249999999999999e-131 | NTclustered | gi|2863505422|gb|CP139937.1| | 61647 | g29082 | i0 | 99.618 | 77.8015267175573 | 262 | 1 | 100 | 0 | 1 | 262 | 3856994 | 3856733 | Pluralibacter gergoviae strain L1 chromosome, complete genome | blastn | 20384 | 479 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pluralibacter | Pluralibacter gergoviae | ||
| 8196648 | 8196648 | PRJNA560029_S_NODE_14067_length_337_cov_1.458333_g13843_i0 | PRJNA560029 | 14067 | 337 | 1.458333 | 4.91458221 | Pluralibacter gergoviae | 61647 | Bacteria | Bacteria | 606 | 5.409999999999998e-169 | NTclustered | gi|689257448|gb|CP009450.1| | 61647 | g13843 | i0 | 99.11 | 4 | 337 | 3 | 100 | 0 | 1 | 337 | 5407446 | 5407110 | Pluralibacter gergoviae strain FB2, complete genome | blastn | 1348 | 606 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pluralibacter | Pluralibacter gergoviae | ||
| 8196710 | 8196710 | PRJNA560029_S_NODE_17947_length_313_cov_3.133333_g17723_i0 | PRJNA560029 | 17947 | 313 | 3.133333 | 9.80733229 | Vibrio cholerae | 666 | Bacteria | Bacteria | 579 | 1.0899999999999999e-160 | NTclustered | gi|1858885135|gb|CP053795.1| | 666 | g17723 | i0 | 100 | 1 | 313 | 0 | 100 | 0 | 1 | 313 | 633188 | 633500 | Vibrio cholerae strain W10G chromosome 2, complete sequence | blastn | 313 | 579 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 8197144 | 8197144 | PRJNA560029_S_NODE_5167_length_432_cov_2.445682_g4943_i0 | PRJNA560029 | 5167 | 432 | 2.445682 | 10.56534624 | Plesiomonas shigelloides | 703 | Bacteria | Bacteria | 782 | 0 | NTclustered | gi|2050160876|gb|CP076372.1| | 703 | g4943 | i0 | 99.306 | 68.2893518518518 | 432 | 3 | 100 | 0 | 1 | 432 | 1855650 | 1856081 | Plesiomonas shigelloides strain Colony13 chromosome | blastn | 29501 | 782 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Plesiomonas | Plesiomonas shigelloides | ||
| 8783334 | 8783334 | PRJNA560029_S_NODE_26047_length_275_cov_1.247525_g25823_i0 | PRJNA560029 | 26047 | 275 | 1.247525 | 3.43069375 | Pseudomonas | 286 | Bacteria | Bacteria | 492 | 1.26e-134 | NTclustered | gi|1797741011|dbj|AP022324.1| | 303 | g25823 | i0 | 98.909 | 683.138181818182 | 275 | 3 | 100 | 0 | 1 | 275 | 672734 | 673008 | Pseudomonas putida TS312 DNA, complete genome | blastn | 187863 | 492 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas putida | ||
| 10058966 | 10058966 | PRJNA560029_S_NODE_17708_length_314_cov_6.053942_g17484_i0 | PRJNA560029 | 17708 | 314 | 6.053942 | 19.00937788 | root | 1 | Root_unresolved | Root_unresolved | 553 | 6.609999999999998e-153 | NTclustered | gi|2626477927|gb|CP139410.1| | 548 | g17484 | i0 | 98.408 | 102.990445859873 | 314 | 5 | 100 | 0 | 1 | 314 | 8608 | 8295 | Klebsiella aerogenes strain C252072 plasmid pC252072-2, complete sequence | blastn | 32339 | 553 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella aerogenes | ||
| 10748039 | 10748039 | PRJNA560029_S_NODE_13889_length_338_cov_2.177358_g13665_i0 | PRJNA560029 | 13889 | 338 | 2.177358 | 7.35947004 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 625 | 1.4999999999999999e-174 | NTclustered | gi|1654271667|gb|CP040257.1| | 34062 | g13665 | i0 | 100 | 23.5621301775148 | 338 | 0 | 100 | 0 | 1 | 338 | 298088 | 298425 | Moraxella osloensis strain MOXF1 chromosome, complete genome | blastn | 7964 | 625 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 11333574 | 11333574 | PRJNA560029_S_NODE_19549_length_305_cov_2.456897_g19325_i0 | PRJNA560029 | 19549 | 305 | 2.456897 | 7.49353585 | Comamonas | 283 | Bacteria | Bacteria | 564 | 2.95e-156 | NTclustered | gi|1885879519|gb|CP043568.1| | 285 | g19325 | i0 | 100 | 493.950819672131 | 305 | 0 | 100 | 0 | 1 | 305 | 593892 | 593588 | Comamonas testosteroni strain T5-67 chromosome, complete genome | blastn | 150655 | 564 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 11333594 | 11333594 | PRJNA560029_S_NODE_32889_length_248_cov_2.000000_g32665_i0 | PRJNA560029 | 32889 | 248 | 2 | 4.96 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|1185671278|gb|KX784503.1| | 546 | g32665 | i0 | 100 | 104 | 248 | 0 | 100 | 0 | 1 | 248 | 42516 | 42269 | Citrobacter freundii strain 17285 plasmid p17285-IMP, complete sequence | blastn | 25792 | 459 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Citrobacter | Citrobacter freundii | ||
| 12023024 | 12023024 | PRJNA560029_S_NODE_24590_length_281_cov_3.822115_g24366_i0 | PRJNA560029 | 24590 | 281 | 3.822115 | 10.74014315 | Vibrio sp. HDW18 | 2714948 | Bacteria | Bacteria | 150 | 8.929999999999999e-32 | NTclustered | gi|1821214403|gb|CP049913.1| | 2714948 | g24366 | i0 | 81.443 | 0.690391459074733 | 194 | 27 | 66 | 3 | 93 | 278 | 1512152 | 1511960 | Vibrio sp. HDW18 chromosome, complete genome | blastn | 194 | 150 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio sp. HDW18 | ||
| 12023276 | 12023276 | PRJNA560029_S_NODE_35830_length_239_cov_2.246988_g35606_i0 | PRJNA560029 | 35830 | 239 | 2.246988 | 5.37030132 | Pluralibacter gergoviae | 61647 | Bacteria | Bacteria | 425 | 1.1e-114 | NTclustered | gi|2863505422|gb|CP139937.1| | 61647 | g35606 | i0 | 98.745 | 2.98744769874477 | 239 | 3 | 100 | 0 | 1 | 239 | 3825789 | 3825551 | Pluralibacter gergoviae strain L1 chromosome, complete genome | blastn | 714 | 425 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pluralibacter | Pluralibacter gergoviae | ||
| 12609425 | 12609425 | PRJNA560029_S_NODE_930_length_807_cov_39.123978_g756_i0 | PRJNA560029 | 930 | 807 | 39.123978 | 315.73050246 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 1452 | 0 | NTclustered | gi|2179861008|gb|CP071862.1| | 550 | g756 | i0 | 99.873 | 27.2527881040892 | 790 | 0 | 98 | 1 | 1 | 789 | 173261 | 174050 | Enterobacter cloacae strain GX1Z-1L plasmid pGX1Z-1L, complete sequence | blastn | 21993 | 1452 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cloacae | ||
| 13297965 | 13297965 | PRJNA560029_S_NODE_22051_length_293_cov_1.750000_g21827_i0 | PRJNA560029 | 22051 | 293 | 1.75 | 5.1275 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 531 | 2.86e-146 | NTclustered | gi|1282077041|gb|CP024185.2| | 34062 | g21827 | i0 | 99.317 | 13.8600682593857 | 293 | 2 | 100 | 0 | 1 | 293 | 2275929 | 2275637 | Moraxella osloensis strain TT16 chromosome, complete genome | blastn | 4061 | 531 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 13298184 | 13298184 | PRJNA560029_S_NODE_32211_length_250_cov_2.610169_g31987_i0 | PRJNA560029 | 32211 | 250 | 2.610169 | 6.5254225 | Moraxella sp. DOX410 | 3076087 | Bacteria | Bacteria | 418 | 1.9399999999999998e-112 | NTclustered | gi|2586132762|gb|CP135138.1| | 3076087 | g31987 | i0 | 96.8 | 15.624 | 250 | 8 | 100 | 0 | 1 | 250 | 1838023 | 1838272 | Moraxella sp. DOX410 chromosome, complete genome | blastn | 3906 | 418 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. DOX410 | ||
| 13298213 | 13298213 | PRJNA560029_S_NODE_33351_length_247_cov_1.189655_g33127_i0 | PRJNA560029 | 33351 | 247 | 1.189655 | 2.93844785 | Pluralibacter gergoviae | 61647 | Bacteria | Bacteria | 429 | 8.83e-116 | NTclustered | gi|2863505422|gb|CP139937.1| | 61647 | g33127 | i0 | 97.976 | 40.8016194331984 | 247 | 5 | 100 | 0 | 1 | 247 | 2167729 | 2167975 | Pluralibacter gergoviae strain L1 chromosome, complete genome | blastn | 10078 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pluralibacter | Pluralibacter gergoviae | ||
| 13298227 | 13298227 | PRJNA560029_S_NODE_33831_length_245_cov_5.540698_g33607_i0 | PRJNA560029 | 33831 | 245 | 5.540698 | 13.5747101 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 436 | 5.229999999999999e-118 | NTclustered | gi|1278991277|gb|CP024180.2| | 34062 | g33607 | i0 | 98.776 | 16.8204081632653 | 245 | 3 | 100 | 0 | 1 | 245 | 327210 | 327454 | Moraxella osloensis strain KSH chromosome, complete genome | blastn | 4121 | 436 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 13298367 | 13298367 | PRJNA560029_S_NODE_8571_length_381_cov_1.629870_g8347_i0 | PRJNA560029 | 8571 | 381 | 1.62987 | 6.2098047 | Plesiomonas shigelloides | 703 | Bacteria | Bacteria | 429 | 1.44e-115 | NTclustered | gi|1037176310|emb|LT575468.1| | 703 | g8347 | i0 | 100 | 4.87139107611549 | 232 | 0 | 61 | 0 | 20 | 251 | 2485440 | 2485209 | Plesiomonas shigelloides strain NCTC10360 genome assembly, chromosome: 1 | blastn | 1856 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Plesiomonas | Plesiomonas shigelloides | ||
| 14572834 | 14572834 | PRJNA560029_S_NODE_23452_length_286_cov_4.000000_g23228_i0 | PRJNA560029 | 23452 | 286 | 4 | 11.44 | Plesiomonas shigelloides | 703 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|1370756710|gb|CP027852.1| | 703 | g23228 | i0 | 100 | 752.321678321678 | 286 | 0 | 100 | 0 | 1 | 286 | 1709081 | 1708796 | Plesiomonas shigelloides strain MS-17-188 chromosome, complete genome | blastn | 215164 | 529 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Plesiomonas | Plesiomonas shigelloides | ||
| 14572835 | 14572835 | PRJNA560029_S_NODE_23492_length_286_cov_2.892019_g23268_i0 | PRJNA560029 | 23492 | 286 | 2.892019 | 8.27117434 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|1934492808|gb|CP059080.1| | 40214 | g23268 | i0 | 100 | 114.548951048951 | 286 | 0 | 100 | 0 | 1 | 286 | 2819928 | 2820213 | Acinetobacter johnsonii strain E10B chromosome, complete genome | blastn | 32761 | 529 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 14573057 | 14573057 | PRJNA560029_S_NODE_32652_length_249_cov_1.312500_g32428_i0 | PRJNA560029 | 32652 | 249 | 1.3125 | 3.268125 | Vibrio sp. HDW18 | 2714948 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|1821214403|gb|CP049913.1| | 2714948 | g32428 | i0 | 99.598 | 1 | 249 | 1 | 100 | 0 | 1 | 249 | 1495797 | 1496045 | Vibrio sp. HDW18 chromosome, complete genome | blastn | 249 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio sp. HDW18 | ||
| 15158468 | 15158468 | PRJNA560029_S_NODE_24792_length_280_cov_5.086957_g24568_i0 | PRJNA560029 | 24792 | 280 | 5.086957 | 14.2434796 | Vibrio | 662 | Bacteria | Bacteria | 501 | 2.13e-137 | NTclustered | gi|2217766341|dbj|AP023379.1| | 666 | g24568 | i0 | 100 | 858.978571428571 | 271 | 0 | 97 | 0 | 10 | 280 | 2943116 | 2943386 | Vibrio cholerae O51 RIMD 2214289 DNA, chromosome 1, complete genome | blastn | 240514 | 501 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 15158495 | 15158495 | PRJNA560029_S_NODE_8732_length_379_cov_3.839869_g8508_i0 | PRJNA560029 | 8732 | 379 | 3.839869 | 14.55310351 | Moraxellaceae | 468 | Bacteria | Bacteria | 695 | 0 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g8508 | i0 | 99.737 | 427.094986807388 | 380 | 0 | 100 | 1 | 1 | 379 | 1497796 | 1497417 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 161869 | 695 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 15846482 | 15846482 | PRJNA560029_S_NODE_11313_length_356_cov_3.236749_g11089_i0 | PRJNA560029 | 11313 | 356 | 3.236749 | 11.52282644 | Pluralibacter gergoviae | 61647 | Bacteria | Bacteria | 274 | 6.609999999999998e-69 | NTclustered | gi|689257448|gb|CP009450.1| | 61647 | g11089 | i0 | 94.857 | 25.4438202247191 | 175 | 9 | 49 | 0 | 3 | 177 | 2303755 | 2303929 | Pluralibacter gergoviae strain FB2, complete genome | blastn | 9058 | 274 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pluralibacter | Pluralibacter gergoviae | ||
| 17121496 | 17121496 | PRJNA560029_S_NODE_17514_length_315_cov_6.413223_g17290_i0 | PRJNA560029 | 17514 | 315 | 6.413223 | 20.20165245 | Buchnera aphidicola | 9 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2736169490|gb|CP140043.1| | 3093912 | g17290 | i0 | 96.97 | 0.104761904761905 | 33 | 1 | 10 | 0 | 1 | 33 | 102441 | 102473 | MAG: Buchnera aphidicola (Schlechtendalia peitan) isolate R2 chromosome, complete genome | blastn | 33 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Buchnera | Buchnera aphidicola | ||
| 19670202 | 19670202 | PRJNA560029_S_NODE_14196_length_336_cov_1.912548_g13972_i0 | PRJNA560029 | 14196 | 336 | 1.912548 | 6.42616128 | Pluralibacter gergoviae | 61647 | Bacteria | Bacteria | 616 | 8.96e-172 | NTclustered | gi|2863505422|gb|CP139937.1| | 61647 | g13972 | i0 | 99.702 | 91.5119047619048 | 336 | 1 | 100 | 0 | 1 | 336 | 421070 | 420735 | Pluralibacter gergoviae strain L1 chromosome, complete genome | blastn | 30748 | 616 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pluralibacter | Pluralibacter gergoviae | ||
| 19670707 | 19670707 | PRJNA560029_S_NODE_5176_length_432_cov_1.228412_g4952_i0 | PRJNA560029 | 5176 | 432 | 1.228412 | 5.30673984 | Vibrio sp. HDW18 | 2714948 | Bacteria | Bacteria | 749 | 0 | NTclustered | gi|1821214403|gb|CP049913.1| | 2714948 | g4952 | i0 | 98.135 | 0.993055555555556 | 429 | 8 | 99 | 0 | 1 | 429 | 1499364 | 1499792 | Vibrio sp. HDW18 chromosome, complete genome | blastn | 429 | 749 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio sp. HDW18 | ||
| 20946230 | 20946230 | PRJNA560029_S_NODE_30437_length_257_cov_1.951087_g30213_i0 | PRJNA560029 | 30437 | 257 | 1.951087 | 5.01429359 | Plesiomonas shigelloides | 703 | Bacteria | Bacteria | 470 | 5.45e-128 | NTclustered | gi|2050160876|gb|CP076372.1| | 703 | g30213 | i0 | 99.611 | 11.3151750972763 | 257 | 1 | 100 | 0 | 1 | 257 | 2858169 | 2858425 | Plesiomonas shigelloides strain Colony13 chromosome | blastn | 2908 | 470 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Plesiomonas | Plesiomonas shigelloides | ||
| 22220824 | 22220824 | PRJNA560029_S_NODE_14738_length_332_cov_4.119691_g14514_i0 | PRJNA560029 | 14738 | 332 | 4.119691 | 13.67737412 | Acidocella sp. MX-AZ03 | 2697363 | Bacteria | Bacteria | 58.4 | 6.72e-4 | NTclustered | gi|2423887861|gb|CP110774.1| | 2697363 | g14514 | i0 | 97.059 | 0.102409638554217 | 34 | 1 | 10 | 0 | 166 | 199 | 1479217 | 1479250 | Acidocella sp. MX-AZ03 chromosome, complete genome | blastn | 34 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acidocellaceae | Acidocella | Acidocella sp. MX-AZ03 | ||
| 23496471 | 23496471 | PRJNA560029_S_NODE_31439_length_253_cov_1.677778_g31215_i0 | PRJNA560029 | 31439 | 253 | 1.677778 | 4.24477834 | Buchnera aphidicola | 9 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2736166897|gb|CP140036.1| | 3093911 | g31215 | i0 | 94.444 | 0.142292490118577 | 36 | 0 | 13 | 2 | 132 | 165 | 309291 | 309326 | MAG: Buchnera aphidicola (Nurudea yanoniella) isolate R13 chromosome, complete genome | blastn | 36 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Buchnera | Buchnera aphidicola | ||
| 24770089 | 24770089 | PRJNA560029_S_NODE_19180_length_307_cov_1.662393_g18956_i0 | PRJNA560029 | 19180 | 307 | 1.662393 | 5.10354651 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 545 | 1.0799999999999999e-150 | NTclustered | gi|1278991277|gb|CP024180.2| | 34062 | g18956 | i0 | 98.697 | 34.9218241042345 | 307 | 4 | 100 | 0 | 1 | 307 | 1947542 | 1947848 | Moraxella osloensis strain KSH chromosome, complete genome | blastn | 10721 | 545 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 24770102 | 24770102 | PRJNA560029_S_NODE_19720_length_304_cov_2.783550_g19496_i0 | PRJNA560029 | 19720 | 304 | 2.78355 | 8.461992 | Pluralibacter gergoviae | 61647 | Bacteria | Bacteria | 523 | 4.989999999999998e-144 | NTclustered | gi|2863505422|gb|CP139937.1| | 61647 | g19496 | i0 | 97.705 | 100.703947368421 | 305 | 6 | 100 | 1 | 1 | 304 | 5370999 | 5370695 | Pluralibacter gergoviae strain L1 chromosome, complete genome | blastn | 30614 | 523 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Pluralibacter | Pluralibacter gergoviae | ||
| 25356747 | 25356747 | PRJNA560029_S_NODE_25140_length_279_cov_1.470874_g24916_i0 | PRJNA560029 | 25140 | 279 | 1.470874 | 4.10373846 | Burkholderia | 32008 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|685677664|gb|CP008726.1| | 342113 | g24916 | i0 | 100 | 0.537634408602151 | 30 | 0 | 11 | 0 | 1 | 30 | 2608889 | 2608860 | Burkholderia oklahomensis strain EO147 chromosome 1, complete sequence | blastn | 150 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia oklahomensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;