RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA559720" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA559720 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6921553 6921553 PRJNA559720_P_NODE_2346_length_664_cov_7.104907_g2228_i0 PRJNA559720 2346 664 7.104907 47.17658248 Lottia gigantea 225164 Mollusca Mollusca 416 2.04e-111   NTclustered gi|676471634|ref|XM_009060989.1| 225164 g2228 i0 80.784 74.5903614457831 536 99 80 4 1 534 649 116 Lottia gigantea hypothetical protein partial mRNA blastn 49528 416 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
17121269 17121269 PRJNA559720_P_NODE_4454_length_493_cov_154.800000_g4316_i0 PRJNA559720 4454 493 154.8 763.164 Haliotis asinina 109174 Mollusca Mollusca 215 5.8e-51   NTclustered gi|2793421121|ref|XM_067823659.1| 109174 g4316 i0 80.882 7.08113590263692 272 52 55 0 66 337 61 332 PREDICTED: Haliotis asinina histone H2A-like (LOC137292118), mRNA blastn 3491 215 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
20945809 20945809 PRJNA559720_P_NODE_8377_length_345_cov_1.452206_g8238_i0 PRJNA559720 8377 345 1.452206 5.0101107 Octopus bimaculoides 37653 Mollusca Mollusca 75 6.97e-9   NTclustered gi|2427275966|ref|XM_014916214.2| 37653 g8238 i0 94 0.144927536231884 50 1 14 2 167 215 198 246 PREDICTED: Octopus bimaculoides U6 snRNA-associated Sm-like protein LSm3 (LOC106870208), mRNA blastn 50 75 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;