RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA559720" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA559720 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1130417 1130417 PRJNA559720_P_NODE_2241_length_682_cov_3.397373_g2125_i0 PRJNA559720 2241 682 3.397373 23.17008386 Cystodiscus 1141733 Cnidaria other_Eukaryota 276 3.71e-69   NTclustered gi|331704035|gb|HQ822225.1| 1026749 g2125 i0 94.886 23.8123167155425 176 9 26 0 440 615 330 505 Cystodiscus cf. immersus Brazil 1 isolate CTBRIFJ3 18S small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA gene, partial sequence blastn 16240 276 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Cystodiscus Cystodiscus cf. immersus Brazil 1
1819270 1819270 PRJNA559720_P_NODE_6582_length_398_cov_7.323077_g6443_i0 PRJNA559720 6582 398 7.323077 29.14584646 Sphaeromyxa zaharoni 275449 Cnidaria other_Eukaryota 339 2.61e-88   NTclustered gi|2663986569|emb|OY751524.1| 275449 g6443 i0 82.5 3.69597989949749 400 57 100 10 1 398 6595 6207 Sphaeromyxa zaharoni isolate 24.2.2011 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA complete sequences blastn 1471 339 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaeromyxidae Sphaeromyxa Sphaeromyxa zaharoni
3094414 3094414 PRJNA559720_P_NODE_10723_length_294_cov_1.638009_g10584_i0 PRJNA559720 10723 294 1.638009 4.81574646 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 145 4.3699999999999995e-30   NTclustered gi|1524898366|ref|XM_027201588.1| 46731 g10584 i0 79.439 5.80272108843537 214 37 72 6 23 233 1667 1458 PREDICTED: Pocillopora damicornis general transcription and DNA repair factor IIH helicase subunit XPB-like (LOC113684249), mRNA blastn 1706 145 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
12022646 12022646 PRJNA559720_P_NODE_2070_length_704_cov_9.534073_g1958_i0 PRJNA559720 2070 704 9.534073 67.11987392 Aurantiactinomyxon sp. AUM-3 2184215 Cnidaria other_Eukaryota 1301 0   NTclustered gi|1387575735|gb|KY784583.1| 2184215 g1958 i0 100 101.546875 704 0 100 0 1 704 598 1301 Aurantiactinomyxon sp. AUM-3 18S ribosomal RNA gene, complete sequence. blastn 71489 1301 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa     Aurantiactinomyxon Aurantiactinomyxon sp. AUM-3
15846294 15846294 PRJNA559720_P_NODE_12553_length_265_cov_1.385417_g12414_i0 PRJNA559720 12553 265 1.385417 3.67135505 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 176 1.38e-39   NTclustered gi|2729076316|ref|XM_065200451.1| 499914 g12414 i0 79.592 3.45283018867925 245 50 92 0 3 247 1334 1090 PREDICTED: Rhopilema esculentum obg-like ATPase 1 (LOC135684793), mRNA blastn 915 176 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
17121254 17121254 PRJNA559720_P_NODE_3574_length_547_cov_21.413502_g3446_i0 PRJNA559720 3574 547 21.413502 117.13185594 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 180 2.3699999999999998e-40   NTclustered gi|2751569456|ref|XM_059086926.2| 203993 g3446 i0 74.61 3.87934186471664 449 95 80 15 70 508 644 205 PREDICTED: Pocillopora verrucosa calmodulin (LOC131771151), transcript variant X1, mRNA blastn 2122 180 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa
20256928 20256928 PRJNA559720_P_NODE_3056_length_590_cov_12.056093_g2934_i0 PRJNA559720 3056 590 12.056093 71.1309487 Aurantiactinomyxon 66476 Cnidaria other_Eukaryota 985 0   NTclustered gi|1387575734|gb|KY784582.1| 2184214 g2934 i0 96.154 92.9898305084746 598 12 99 1 1 587 598 1 Aurantiactinomyxon sp. AUM-1 18S ribosomal RNA gene, complete sequence. blastn 54864 990 0.994949494949495 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa     Aurantiactinomyxon Aurantiactinomyxon sp. AUM-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;