contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA559720" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4370851 | 4370851 | PRJNA559720_P_NODE_10304_length_302_cov_1.257642_g10165_i0 | PRJNA559720 | 10304 | 302 | 1.257642 | 3.79807884 | Priestia megaterium | 1404 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|1844619902|gb|CP045273.1| | 1404 | g10165 | i0 | 100 | 0.0927152317880795 | 28 | 0 | 9 | 0 | 195 | 222 | 530134 | 530107 | Priestia megaterium strain FDU301 plasmid pFDU301A, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia megaterium | ||
| 4370932 | 4370932 | PRJNA559720_P_NODE_15544_length_244_cov_0.900585_g15405_i0 | PRJNA559720 | 15544 | 244 | 0.900585 | 2.1974274 | Mageeibacillus indolicus | 884684 | Bacteria | Bacteria | 440 | 4.019999999999999e-119 | NTclustered | gi|307346916|gb|CP001850.2| | 699246 | g15405 | i0 | 99.18 | 21.7418032786885 | 244 | 2 | 100 | 0 | 1 | 244 | 1736426 | 1736183 | Mageeibacillus indolicus UPII9-5 chromosome, complete genome | blastn | 5305 | 440 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Mageeibacillus | Mageeibacillus indolicus | ||
| 4958469 | 4958469 | PRJNA559720_P_NODE_16104_length_242_cov_0.911243_g15965_i0 | PRJNA559720 | 16104 | 242 | 0.911243 | 2.20520806 | Veillonella | 29465 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1231683529|emb|LT906445.1| | 29466 | g15965 | i0 | 100 | 15.9710743801653 | 242 | 0 | 100 | 0 | 1 | 242 | 1686633 | 1686392 | Veillonella parvula strain NCTC11810 genome assembly, chromosome: 1 | blastn | 3865 | 448 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella parvula | ||
| 9472188 | 9472188 | PRJNA559720_P_NODE_6348_length_406_cov_8.450450_g6209_i0 | PRJNA559720 | 6348 | 406 | 8.45045 | 34.308827 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 60.2 | 2.33e-4 | NTclustered | gi|1369209706|gb|MG787416.1| | 1282 | g6209 | i0 | 100 | 0.0788177339901478 | 32 | 0 | 8 | 0 | 48 | 79 | 3685 | 3654 | Staphylococcus epidermidis strain I14OR1 ACME IV mobile element, complete sequence | blastn | 32 | 60.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 10058917 | 10058917 | PRJNA559720_P_NODE_13048_length_257_cov_1.673913_g12909_i0 | PRJNA559720 | 13048 | 257 | 1.673913 | 4.30195641 | Staphylococcus | 1279 | Bacteria | Bacteria | 470 | 5.45e-128 | NTclustered | gi|1899862668|gb|CP061041.1| | 1292 | g12909 | i0 | 99.611 | 40.0077821011673 | 257 | 1 | 100 | 0 | 1 | 257 | 2054992 | 2054736 | Staphylococcus warneri strain WS479 chromosome, complete genome | blastn | 10282 | 470 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 10058922 | 10058922 | PRJNA559720_P_NODE_14388_length_248_cov_0.880000_g14249_i0 | PRJNA559720 | 14388 | 248 | 0.88 | 2.1824 | Bacillati | 1783272 | Bacteria | Bacteria | 250 | 7.41e-62 | NTclustered | gi|2127543886|gb|CP085953.1| | 137732 | g14249 | i0 | 93.939 | 10.1048387096774 | 165 | 10 | 67 | 0 | 84 | 248 | 675529 | 675365 | Granulicatella elegans strain FDAARGOS_1559 chromosome, complete genome | blastn | 2506 | 250 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Granulicatella | Granulicatella elegans | ||
| 10747814 | 10747814 | PRJNA559720_P_NODE_11269_length_285_cov_1.240566_g11130_i0 | PRJNA559720 | 11269 | 285 | 1.240566 | 3.5356131 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 521 | 1.6699999999999996e-143 | NTclustered | gi|1214725545|gb|CP022247.1| | 1282 | g11130 | i0 | 99.649 | 100 | 285 | 1 | 100 | 0 | 1 | 285 | 1881201 | 1880917 | Staphylococcus epidermidis strain AMT chromosome, complete genome | blastn | 28500 | 521 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 12609319 | 12609319 | PRJNA559720_P_NODE_13570_length_251_cov_0.865169_g13431_i0 | PRJNA559720 | 13570 | 251 | 0.865169 | 2.17157419 | Staphylococcus | 1279 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1143273938|gb|CP019597.1| | 29382 | g13431 | i0 | 100 | 7 | 251 | 0 | 100 | 0 | 1 | 251 | 743819 | 744069 | Staphylococcus cohnii strain SNUDS-2 chromosome, complete genome | blastn | 1757 | 464 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus cohnii | ||
| 13297615 | 13297615 | PRJNA559720_P_NODE_16351_length_241_cov_0.916667_g16212_i0 | PRJNA559720 | 16351 | 241 | 0.916667 | 2.20916747 | Marinilactibacillus sp. 15R | 1911586 | Bacteria | Bacteria | 351 | 1.91e-92 | NTclustered | gi|1112927908|gb|CP017761.1| | 1911586 | g16212 | i0 | 92.946 | 1 | 241 | 17 | 100 | 0 | 1 | 241 | 2256372 | 2256612 | Marinilactibacillus sp. 15R chromosome, complete sequence | blastn | 241 | 351 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Marinilactibacillus | Marinilactibacillus sp. 15R | ||
| 15846315 | 15846315 | PRJNA559720_P_NODE_14453_length_248_cov_0.880000_g14314_i0 | PRJNA559720 | 14453 | 248 | 0.88 | 2.1824 | Agathobacter rectalis | 39491 | Bacteria | Bacteria | 448 | 2.4499999999999996e-121 | NTclustered | gi|291526582|emb|FP929043.1| | 657317 | g14314 | i0 | 99.194 | 6.54435483870968 | 248 | 2 | 100 | 0 | 1 | 248 | 2663089 | 2662842 | Eubacterium rectale M104/1 draft genome | blastn | 1623 | 448 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Agathobacter | Agathobacter rectalis | ||
| 16433079 | 16433079 | PRJNA559720_P_NODE_15873_length_243_cov_0.905882_g15734_i0 | PRJNA559720 | 15873 | 243 | 0.905882 | 2.20129326 | Streptococcus | 1301 | Bacteria | Bacteria | 394 | 3.16e-105 | NTclustered | gi|1985957267|gb|CP069427.1| | 1303 | g15734 | i0 | 95.885 | 81.8559670781893 | 243 | 10 | 100 | 0 | 1 | 243 | 72359 | 72117 | Streptococcus oralis strain SF100 chromosome, complete genome | blastn | 19891 | 396 | 0.994949494949495 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 17121207 | 17121207 | PRJNA559720_P_NODE_13814_length_250_cov_0.870056_g13675_i0 | PRJNA559720 | 13814 | 250 | 0.870056 | 2.17514 | Carnobacterium viridans | 174587 | Bacteria | Bacteria | 390 | 4.22e-104 | NTclustered | gi|2119245265|gb|CP084918.1| | 174587 | g13675 | i0 | 94.8 | 2.988 | 250 | 13 | 100 | 0 | 1 | 250 | 9894 | 9645 | Carnobacterium viridans strain AB01 plasmid pDC01-1, complete sequence | blastn | 747 | 390 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Carnobacterium | Carnobacterium viridans | ||
| 18981759 | 18981759 | PRJNA559720_P_NODE_13895_length_250_cov_0.870056_g13756_i0 | PRJNA559720 | 13895 | 250 | 0.870056 | 2.17514 | Staphylococcus | 1279 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2714337209|gb|CP150752.1| | 1280 | g13756 | i0 | 100 | 100 | 250 | 0 | 100 | 0 | 1 | 250 | 1614193 | 1613944 | Staphylococcus aureus strain TUM22458 chromosome, complete genome | blastn | 25000 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 19669980 | 19669980 | PRJNA559720_P_NODE_13636_length_251_cov_0.865169_g13497_i0 | PRJNA559720 | 13636 | 251 | 0.865169 | 2.17157419 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1848615759|gb|CP054006.1| | 1290 | g13497 | i0 | 100 | 66.6294820717131 | 251 | 0 | 100 | 0 | 1 | 251 | 1627889 | 1628139 | Staphylococcus hominis strain FDAARGOS_762 chromosome, complete genome | blastn | 16724 | 464 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 19669984 | 19669984 | PRJNA559720_P_NODE_13916_length_250_cov_0.870056_g13777_i0 | PRJNA559720 | 13916 | 250 | 0.870056 | 2.17514 | Staphylococcus ureilyticus | 94138 | Bacteria | Bacteria | 446 | 8.89e-121 | NTclustered | gi|2905461398|gb|CP180185.1| | 94138 | g13777 | i0 | 98.8 | 32.844 | 250 | 3 | 100 | 0 | 1 | 250 | 1443576 | 1443825 | Staphylococcus ureilyticus strain RSM-JSascm chromosome | blastn | 8211 | 446 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus ureilyticus | ||
| 20945690 | 20945690 | PRJNA559720_P_NODE_13617_length_251_cov_0.865169_g13478_i0 | PRJNA559720 | 13617 | 251 | 0.865169 | 2.17157419 | Veillonella orientalis | 2682455 | Bacteria | Bacteria | 431 | 2.4999999999999996e-116 | NTclustered | gi|2021399589|dbj|AP022322.1| | 2682455 | g13478 | i0 | 97.61 | 14.8486055776892 | 251 | 6 | 100 | 0 | 1 | 251 | 296872 | 297122 | Veillonella sp. S12025-13 DNA, complete genome | blastn | 3727 | 431 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella orientalis | ||
| 20945706 | 20945706 | PRJNA559720_P_NODE_15037_length_246_cov_0.890173_g14898_i0 | PRJNA559720 | 15037 | 246 | 0.890173 | 2.18982558 | Parvimonas micra | 33033 | Bacteria | Bacteria | 185 | 2.1e-42 | NTclustered | gi|2702638792|gb|CP148048.1| | 33033 | g14898 | i0 | 84.211 | 11.719512195122 | 190 | 30 | 77 | 0 | 3 | 192 | 6293 | 6104 | Parvimonas micra strain JM503A chromosome, complete genome | blastn | 2883 | 185 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Parvimonas | Parvimonas micra | ||
| 20945774 | 20945774 | PRJNA559720_P_NODE_5797_length_427_cov_25.158192_g5658_i0 | PRJNA559720 | 5797 | 427 | 25.158192 | 107.42547984 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 60.2 | 2.46e-4 | NTclustered | gi|1369209706|gb|MG787416.1| | 1282 | g5658 | i0 | 100 | 0.0749414519906323 | 32 | 0 | 7 | 0 | 349 | 380 | 3654 | 3685 | Staphylococcus epidermidis strain I14OR1 ACME IV mobile element, complete sequence | blastn | 32 | 60.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 23495873 | 23495873 | PRJNA559720_P_NODE_12479_length_266_cov_1.595855_g12340_i0 | PRJNA559720 | 12479 | 266 | 1.595855 | 4.2449743 | Staphylococcus pasteuri | 45972 | Bacteria | Bacteria | 296 | 1.02e-75 | NTclustered | gi|1250047636|gb|CP017464.1| | 45972 | g12340 | i0 | 88.797 | 245.804511278195 | 241 | 27 | 100 | 0 | 1 | 241 | 49681 | 49441 | Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence | blastn | 65384 | 296 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pasteuri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;