contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA558770" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1129884 | 1129884 | PRJNA558770_P_NODE_388301_length_183_cov_1.000000_g386296_i0 | PRJNA558770 | 388301 | 183 | 1 | 1.83 | Prosthecobacter | 48463 | Bacteria | Bacteria | 195 | 2.45e-45 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g386296 | i0 | 85.87 | 2.01092896174863 | 184 | 24 | 100 | 2 | 1 | 183 | 250 | 432 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 368 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 1816340 | 1816340 | PRJNA558770_P_NODE_293862_length_234_cov_1.452261_g291857_i0 | PRJNA558770 | 293862 | 234 | 1.452261 | 3.39829074 | Coraliomargarita akajimensis | 395922 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|293612874|gb|CP001998.1| | 583355 | g291857 | i0 | 100 | 0.11965811965812 | 28 | 0 | 12 | 0 | 167 | 194 | 3683871 | 3683898 | Coraliomargarita akajimensis DSM 45221, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita akajimensis | |
| 7508215 | 7508215 | PRJNA558770_P_NODE_76566_length_237_cov_9.316832_g74561_i0 | PRJNA558770 | 76566 | 237 | 9.316832 | 22.08089184 | Akkermansia | 239934 | Bacteria | Bacteria | 274 | 4.17e-69 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g74561 | i0 | 96.386 | 208.729957805907 | 166 | 6 | 70 | 0 | 2 | 167 | 139033 | 138868 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 49469 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 8195375 | 8195375 | PRJNA558770_P_NODE_63327_length_262_cov_6.189427_g61322_i0 | PRJNA558770 | 63327 | 262 | 6.189427 | 16.21629874 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 375 | 1.25e-99 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g61322 | i0 | 92.996 | 270.553435114504 | 257 | 18 | 98 | 0 | 3 | 259 | 2442 | 2186 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 70885 | 375 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 8195433 | 8195433 | PRJNA558770_P_NODE_65947_length_256_cov_17.398190_g63942_i0 | PRJNA558770 | 65947 | 256 | 17.39819 | 44.5393664 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 148 | 2.89e-31 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g63942 | i0 | 98.795 | 80.41796875 | 83 | 1 | 32 | 0 | 6 | 88 | 3894553 | 3894471 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 20587 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 11332993 | 11332993 | PRJNA558770_P_NODE_381729_length_210_cov_5.514286_g379724_i0 | PRJNA558770 | 381729 | 210 | 5.514286 | 11.5800006 | Akkermansia | 239934 | Bacteria | Bacteria | 309 | 9.9e-80 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g379724 | i0 | 95.385 | 276.719047619048 | 195 | 8 | 92 | 1 | 16 | 209 | 138839 | 139033 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 58111 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 12017292 | 12017292 | PRJNA558770_P_NODE_156850_length_234_cov_5.959799_g154845_i0 | PRJNA558770 | 156850 | 234 | 5.959799 | 13.94592966 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 117 | 7.33e-22 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g154845 | i0 | 94.667 | 2.95726495726496 | 75 | 4 | 32 | 0 | 160 | 234 | 2558774 | 2558848 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 692 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 12019406 | 12019406 | PRJNA558770_P_NODE_27190_length_405_cov_5.116216_g25234_i0 | PRJNA558770 | 27190 | 405 | 5.116216 | 20.7206748 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 99 | 4.92e-16 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g25234 | i0 | 92.647 | 0.167901234567901 | 68 | 5 | 17 | 0 | 1 | 68 | 1902554 | 1902621 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 68 | 99 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13293293 | 13293293 | PRJNA558770_P_NODE_204211_length_234_cov_3.623116_g202206_i0 | PRJNA558770 | 204211 | 234 | 3.623116 | 8.47809144 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g202206 | i0 | 100 | 0.247863247863248 | 30 | 0 | 13 | 0 | 194 | 223 | 2258446 | 2258475 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 58 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 15842264 | 15842264 | PRJNA558770_P_NODE_215793_length_234_cov_3.221106_g213788_i0 | PRJNA558770 | 215793 | 234 | 3.221106 | 7.53738804 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 139 | 1.56e-28 | NTclustered | gi|1805906055|gb|CP027004.1| | 239935 | g213788 | i0 | 100 | 55.9786324786325 | 75 | 0 | 62 | 0 | 160 | 234 | 306967 | 307041 | Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome | blastn | 13099 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 15843159 | 15843159 | PRJNA558770_P_NODE_271493_length_234_cov_1.879397_g269488_i0 | PRJNA558770 | 271493 | 234 | 1.879397 | 4.39778898 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 93.5 | 1.23e-14 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g269488 | i0 | 93.548 | 3.87179487179487 | 62 | 4 | 59 | 0 | 170 | 231 | 3450656 | 3450717 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 906 | 93.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 17120193 | 17120193 | PRJNA558770_P_NODE_63754_length_261_cov_6.805310_g61749_i0 | PRJNA558770 | 63754 | 261 | 6.80531 | 17.7618591 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 147 | 1.06e-30 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g61749 | i0 | 97.647 | 99.4061302681992 | 85 | 2 | 33 | 0 | 157 | 241 | 2702 | 2786 | Luteolibacter sp. SL250 chromosome | blastn | 25945 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 18393725 | 18393725 | PRJNA558770_P_NODE_395915_length_157_cov_3.131148_g393910_i0 | PRJNA558770 | 395915 | 157 | 3.131148 | 4.91590236 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 69.4 | 1.29e-7 | NTclustered | gi|2874253793|emb|OY969777.1| | 412056 | g393910 | i0 | 100 | 1.99363057324841 | 37 | 0 | 24 | 0 | 31 | 67 | 2365014 | 2364978 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 | blastn | 313 | 69.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18980941 | 18980941 | PRJNA558770_P_NODE_288895_length_234_cov_1.587940_g286890_i0 | PRJNA558770 | 288895 | 234 | 1.58794 | 3.7157796 | Prosthecobacter | 48463 | Bacteria | Bacteria | 141 | 4.35e-29 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g286890 | i0 | 100 | 5.04273504273504 | 76 | 0 | 32 | 0 | 159 | 234 | 2312 | 2387 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 1180 | 141 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 19663305 | 19663305 | PRJNA558770_P_NODE_101836_length_234_cov_12.040201_g99831_i0 | PRJNA558770 | 101836 | 234 | 12.040201 | 28.17407034 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g99831 | i0 | 96.97 | 0.141025641025641 | 33 | 1 | 14 | 0 | 41 | 73 | 872581 | 872549 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 33 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 19665885 | 19665885 | PRJNA558770_P_NODE_217936_length_234_cov_3.155779_g215931_i0 | PRJNA558770 | 217936 | 234 | 3.155779 | 7.38452286 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g215931 | i0 | 96.97 | 0.141025641025641 | 33 | 0 | 14 | 1 | 186 | 217 | 1492060 | 1492028 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 33 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 20256372 | 20256372 | PRJNA558770_P_NODE_382396_length_207_cov_5.906977_g380391_i0 | PRJNA558770 | 382396 | 207 | 5.906977 | 12.22744239 | Akkermansia | 239934 | Bacteria | Bacteria | 283 | 5.9e-72 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g380391 | i0 | 95.977 | 248.004830917874 | 174 | 7 | 84 | 0 | 33 | 206 | 138860 | 139033 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 51337 | 283 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 20939017 | 20939017 | PRJNA558770_P_NODE_100277_length_234_cov_12.366834_g98272_i0 | PRJNA558770 | 100277 | 234 | 12.366834 | 28.93839156 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 137 | 5.62e-28 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g98272 | i0 | 100 | 11.9273504273504 | 74 | 0 | 62 | 0 | 4 | 77 | 3894249 | 3894176 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 2791 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20940889 | 20940889 | PRJNA558770_P_NODE_180537_length_234_cov_4.618090_g178532_i0 | PRJNA558770 | 180537 | 234 | 4.61809 | 10.8063306 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 69.4 | 2.08e-7 | NTclustered | gi|2916415364|gb|CP170459.1| | 2026799 | g178532 | i0 | 95.349 | 0.183760683760684 | 43 | 2 | 18 | 0 | 192 | 234 | 5823120 | 5823162 | MAG: Verrucomicrobiota bacterium isolate tig00002468 chromosome, complete genome | blastn | 43 | 69.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 22805871 | 22805871 | PRJNA558770_P_NODE_142238_length_234_cov_7.010050_g140233_i0 | PRJNA558770 | 142238 | 234 | 7.01005 | 16.403517 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 76.8 | 1.24e-9 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g140233 | i0 | 89.831 | 0.658119658119658 | 59 | 6 | 25 | 0 | 174 | 232 | 642353 | 642411 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 154 | 76.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23491398 | 23491398 | PRJNA558770_P_NODE_190559_length_234_cov_4.160804_g188554_i0 | PRJNA558770 | 190559 | 234 | 4.160804 | 9.73628136 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 89.8 | 1.6e-13 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g188554 | i0 | 88.889 | 0.611111111111111 | 72 | 8 | 31 | 0 | 162 | 233 | 101123 | 101194 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 143 | 89.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 24765811 | 24765811 | PRJNA558770_P_NODE_221920_length_234_cov_3.035176_g219915_i0 | PRJNA558770 | 221920 | 234 | 3.035176 | 7.10231184 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 119 | 2.04e-22 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g219915 | i0 | 94.872 | 17.9871794871795 | 78 | 0 | 65 | 4 | 1 | 75 | 1009816 | 1009892 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 4209 | 119 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;