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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA558770" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 20 ✖

bioproject 1

  • PRJNA558770 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
539967 539967 PRJNA558770_P_NODE_247361_length_234_cov_2.366834_g245356_i0 PRJNA558770 247361 234 2.366834 5.53839156 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 139 1.56e-28   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g245356 i0 100 12.3547008547009 75 0 63 0 1 75 3410 3336 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2891 139 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
540611 540611 PRJNA558770_P_NODE_291861_length_234_cov_1.527638_g289856_i0 PRJNA558770 291861 234 1.527638 3.57467292 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 100 7.38e-17   NTclustered gi|2579156136|gb|OR459835.1| 5763 g289856 i0 90.667 2.56410256410256 75 7 32 0 1 75 37961 37887 Naegleria fowleri isolate TW mitochondrion, complete genome blastn 600 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
1814566 1814566 PRJNA558770_P_NODE_185622_length_234_cov_4.376884_g183617_i0 PRJNA558770 185622 234 4.376884 10.24190856 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 134 7.28e-27   NTclustered gi|2031939004|emb|OD957472.1| 5763 g183617 i0 100 28.8589743589744 72 0 62 0 3 74 820 891 Naegleria fowleri Karachi_NF001 strain blastn 6753 134 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
3680157 3680157 PRJNA558770_P_NODE_170543_length_234_cov_5.135678_g168538_i0 PRJNA558770 170543 234 5.135678 12.01748652 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 139 1.56e-28   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g168538 i0 100 20.4871794871795 75 0 64 0 160 234 1029 1103 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 4794 139 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
6232912 6232912 PRJNA558770_P_NODE_250185_length_234_cov_2.306533_g248180_i0 PRJNA558770 250185 234 2.306533 5.39728722 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 139 1.56e-28   NTclustered gi|89148133|gb|DQ388519.1| 373143 g248180 i0 100 12.7777777777778 75 0 64 0 160 234 2374 2448 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 2990 139 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
6919771 6919771 PRJNA558770_P_NODE_391926_length_170_cov_2.592593_g389921_i0 PRJNA558770 391926 170 2.592593 4.4074081 uncultured Sphenomonadales 315795 Euglenozoa other_Eukaryota 171 3.7599999999999997e-38   NTclustered gi|60687330|gb|AY821957.1| 315795 g389921 i0 97.959 45.7588235294118 98 2 99 0 1 98 767 670 Uncultured Sphenomonadales clone CH1_S2_16 small subunit ribosomal RNA gene, partial sequence blastn 7779 171 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida     uncultured Sphenomonadales
8193116 8193116 PRJNA558770_P_NODE_262647_length_234_cov_2.045226_g260642_i0 PRJNA558770 262647 234 2.045226 4.78582884 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 54.7 0.006   NTclustered gi|2794852994|ref|XM_067896746.1| 2761500 g260642 i0 88.889 0.192307692307692 45 4 19 1 160 203 781 825 Porcisia hertigi uncharacterized protein (JKF63_00695), partial mRNA blastn 45 54.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
8782917 8782917 PRJNA558770_P_NODE_46587_length_315_cov_10.050000_g44587_i0 PRJNA558770 46587 315 10.05 31.6575 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 191 5.99e-44   NTclustered gi|1658007|gb|U73613.1|LBU73613 5660 g44587 i0 96.522 80.1460317460318 115 4 37 0 37 151 159 45 Leishmania braziliensis 24S alpha ribosomal RNA gene, partial sequence blastn 25246 191 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
9467916 9467916 PRJNA558770_P_NODE_207708_length_234_cov_3.492462_g205703_i0 PRJNA558770 207708 234 3.492462 8.17236108 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 139 1.56e-28   NTclustered gi|2618963742|gb|OR769034.1| 5762 g205703 i0 100 18.8589743589744 75 0 63 0 160 234 4947 5021 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 4413 139 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
9468092 9468092 PRJNA558770_P_NODE_217088_length_234_cov_3.180905_g215083_i0 PRJNA558770 217088 234 3.180905 7.4433177 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 56.5 0.002   NTclustered gi|342183762|emb|HE575323.1| 1068625 g215083 i0 100 0.128205128205128 30 0 13 0 195 224 527912 527883 Trypanosoma congolense IL3000 annotated genomic contig, chromosome 10 blastn 30 56.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
10746671 10746671 PRJNA558770_P_NODE_59449_length_271_cov_4.728814_g57445_i0 PRJNA558770 59449 271 4.728814 12.81508594 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 196 1.08e-45   NTclustered gi|2031940710|emb|OD957740.1| 5763 g57445 i0 98.214 2.67527675276753 112 2 41 0 160 271 247 358 Naegleria fowleri Karachi_NF001 strain blastn 725 196 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
11332031 11332031 PRJNA558770_P_NODE_176789_length_234_cov_4.798995_g174784_i0 PRJNA558770 176789 234 4.798995 11.2296483 Entosiphon 101492 Euglenozoa other_Eukaryota 95.3 3.43e-15   NTclustered gi|41400272|gb|AY425008.1| 259048 g174784 i0 90.411 1.86752136752137 73 5 31 2 4 75 980 1051 Entosiphon sp. TCS-2003 18S ribosomal RNA gene, partial sequence blastn 437 95.3 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp. TCS 2003
15843275 15843275 PRJNA558770_P_NODE_279093_length_234_cov_1.748744_g277088_i0 PRJNA558770 279093 234 1.748744 4.09206096 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.021   NTclustered gi|1031970232|gb|CP015666.1| 85057 g277088 i0 100 0.11965811965812 28 0 12 0 28 55 870122 870149 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI16, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
17117981 17117981 PRJNA558770_P_NODE_265454_length_234_cov_1.994975_g263449_i0 PRJNA558770 265454 234 1.994975 4.6682415 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 132 2.62e-26   NTclustered gi|2651357799|gb|PP174312.1| 1892890 g263449 i0 100 0.623931623931624 71 0 62 0 163 233 3226 3156 Heterolobosea sp. isolate S28D10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 146 132 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
18390640 18390640 PRJNA558770_P_NODE_177815_length_234_cov_4.748744_g175810_i0 PRJNA558770 177815 234 4.748744 11.11206096 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 134 7.28e-27   NTclustered gi|2031939004|emb|OD957472.1| 5763 g175810 i0 98.667 7.13675213675214 75 1 65 0 1 75 202 128 Naegleria fowleri Karachi_NF001 strain blastn 1670 134 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
18395119 18395119 PRJNA558770_P_NODE_92235_length_234_cov_14.698492_g90230_i0 PRJNA558770 92235 234 14.698492 34.39447128 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 130 9.41e-26   NTclustered gi|2031939764|emb|OD957623.1| 5763 g90230 i0 97.368 0.324786324786325 76 2 32 0 1 76 800 875 Naegleria fowleri Karachi_NF001 strain blastn 76 130 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20943676 20943676 PRJNA558770_P_NODE_381517_length_211_cov_5.357955_g379512_i0 PRJNA558770 381517 211 5.357955 11.30528505 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 243 1.02e-59   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g379512 i0 87.619 6.43601895734597 210 24 99 2 1 209 1028 820 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 1358 243 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
23493001 23493001 PRJNA558770_P_NODE_28719_length_398_cov_1.878788_g26755_i0 PRJNA558770 28719 398 1.878788 7.47757624 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 121 1.0300000000000001e-22   NTclustered gi|2031942720|emb|OD958192.1| 5763 g26755 i0 95.946 7.03768844221106 74 3 19 0 1 74 115 188 Naegleria fowleri Karachi_NF001 strain blastn 2801 121 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
23493203 23493203 PRJNA558770_P_NODE_30139_length_391_cov_6.292135_g28169_i0 PRJNA558770 30139 391 6.292135 24.60224785 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 230 1.6099999999999996e-55   NTclustered gi|2031941502|emb|OD957913.1| 5763 g28169 i0 85.306 0.626598465473146 245 11 56 10 1 220 70 314 Naegleria fowleri Karachi_NF001 strain blastn 245 230 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
24765512 24765512 PRJNA558770_P_NODE_204460_length_234_cov_3.613065_g202455_i0 PRJNA558770 204460 234 3.613065 8.4545721 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 135 2.02e-27   NTclustered gi|2651357799|gb|PP174312.1| 1892890 g202455 i0 98.684 0.64957264957265 76 1 65 0 159 234 2890 2815 Heterolobosea sp. isolate S28D10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 152 135 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;