RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA557895" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA557895 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1811540 1811540 PRJNA557895_P_NODE_20362_length_206_cov_0.974522_g20007_i0 PRJNA557895 20362 206 0.974522 2.00751532 Myoviridae sp. ctNQr16 2826644 Viruses Viruses 52.8 0.018   NTclustered gi|2051091879|tpg|BK014863.1| 2826644 g20007 i0 100 0.135922330097087 28 0 14 0 171 198 6516 6543 MAG TPA_asm: Myoviridae sp. ctNQr16, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Myoviridae sp. ctNQr16
8188968 8188968 PRJNA557895_P_NODE_27347_length_176_cov_1.110236_g26992_i0 PRJNA557895 27347 176 1.110236 1.95401536 Caudoviricetes sp. 2832643 Viruses Viruses 60.2 8.87e-5   NTclustered gi|2054626776|tpg|BK022234.1| 2832643 g26992 i0 87.273 0.3125 55 4 31 3 33 86 101540 101592 MAG TPA_asm: Caudoviricetes sp. isolate ctoHj1, partial genome blastn 55 60.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11331462 11331462 PRJNA557895_P_NODE_30289_length_167_cov_0.864407_g29934_i0 PRJNA557895 30289 167 0.864407 1.44355969 Viruses 10239 Viruses Viruses 52.8 0.014   NTclustered gi|2059790287|tpg|BK039526.1| 38018 g29934 i0 100 0.335329341317365 28 0 17 0 97 124 12995 12968 MAG TPA_asm: Bacteriophage sp. isolate ctIei2, partial genome blastn 56 52.8 1 Viruses               Bacteriophage sp.
17706272 17706272 PRJNA557895_P_NODE_25914_length_181_cov_1.348485_g25559_i0 PRJNA557895 25914 181 1.348485 2.44075785 Viruses 10239 Viruses Viruses 52.8 0.015   NTclustered gi|2294118676|gb|OP073777.1| 38018 g25559 i0 100 0.92817679558011 28 0 15 0 146 173 18773 18746 MAG: Bacteriophage sp. isolate 1241_3989, partial genome blastn 168 52.8 1 Viruses               Bacteriophage sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;