contig_metadata
49 rows where analysis = "blastn", bioproject = "PRJNA557895" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 536327 | 536327 | PRJNA557895_P_NODE_37541_length_162_cov_0.902655_g37186_i0 | PRJNA557895 | 37541 | 162 | 0.902655 | 1.4623011 | Pseudaeromonas aegiceratis | 3153928 | Bacteria | Bacteria | 261 | 2.06e-65 | NTclustered | gi|2872785617|gb|CP158016.1| | 3153928 | g37186 | i0 | 95.706 | 499.771604938272 | 163 | 5 | 100 | 2 | 1 | 162 | 26735 | 26896 | Pseudaeromonas sp. ZJS20 chromosome, complete genome | blastn | 80963 | 261 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Pseudaeromonas | Pseudaeromonas aegiceratis | ||
| 1128264 | 1128264 | PRJNA557895_P_NODE_11181_length_275_cov_1.128319_g10826_i0 | PRJNA557895 | 11181 | 275 | 1.128319 | 3.10287725 | root | 1 | Root_unresolved | Root_unresolved | 508 | 1.2499999999999999e-139 | NTclustered | gi|2706519156|gb|CP149578.1| | 287 | g10826 | i0 | 100 | 100 | 275 | 0 | 100 | 0 | 1 | 275 | 6002819 | 6003093 | Mutant Pseudomonas aeruginosa isolate FELIX_MS413, complete genome | blastn | 27500 | 508 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 1128296 | 1128296 | PRJNA557895_P_NODE_21_length_7449_cov_7.232973_g15_i0 | PRJNA557895 | 21 | 7449 | 7.232973 | 538.78415877 | root | 1 | Root_unresolved | Root_unresolved | 3574 | 0 | NTclustered | gi|1726022446|gb|CP042865.1| | 562 | g15 | i0 | 75.36 | 97.8187676198147 | 7423 | 1828 | 99 | 1 | 14 | 7436 | 3109103 | 3116524 | Escherichia coli strain ATCC BAA-196 chromosome, complete genome | blastn | 728652 | 3591 | 0.995265942634364 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1811352 | 1811352 | PRJNA557895_P_NODE_11302_length_274_cov_0.795556_g10947_i0 | PRJNA557895 | 11302 | 274 | 0.795556 | 2.17982344 | Arsenophonus apicola | 2879119 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|2498246299|gb|CP123759.1| | 2879119 | g10947 | i0 | 100 | 0.102189781021898 | 28 | 0 | 10 | 0 | 211 | 238 | 2579663 | 2579690 | Arsenophonus apicola strain aApi_AU chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Arsenophonus | Arsenophonus apicola | ||
| 1811998 | 1811998 | PRJNA557895_P_NODE_39402_length_157_cov_2.500000_g39047_i0 | PRJNA557895 | 39402 | 157 | 2.5 | 3.925 | Delftia acidovorans | 80866 | Bacteria | Bacteria | 279 | 5.46e-71 | NTclustered | gi|1948628884|gb|CP066006.1| | 80866 | g39047 | i0 | 98.726 | 28.4585987261147 | 157 | 2 | 100 | 0 | 1 | 157 | 2817052 | 2817208 | Delftia acidovorans strain FDAARGOS_997 chromosome, complete genome | blastn | 4468 | 279 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia acidovorans | ||
| 2403753 | 2403753 | PRJNA557895_P_NODE_2_length_24499_cov_11.852393_g1_i0 | PRJNA557895 | 2 | 24499 | 11.852393 | 2903.71776107 | root | 1 | Root_unresolved | Root_unresolved | 11882 | 0 | NTclustered | gi|1595648601|gb|CP029239.1| | 562 | g1 | i0 | 75.429 | 98.5807992162945 | 24484 | 6012 | 99 | 4 | 16 | 24498 | 816169 | 840649 | Escherichia coli strain BH212 chromosome, complete genome | blastn | 2415131 | 11906 | 0.997984209642197 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3679560 | 3679560 | PRJNA557895_P_NODE_20423_length_205_cov_2.179487_g20068_i0 | PRJNA557895 | 20423 | 205 | 2.179487 | 4.46794835 | Acinetobacter | 469 | Bacteria | Bacteria | 379 | 7.229999999999999e-101 | NTclustered | gi|2456158263|gb|CP119200.1| | 40214 | g20068 | i0 | 100 | 627.00487804878 | 205 | 0 | 100 | 0 | 1 | 205 | 166148 | 165944 | Acinetobacter johnsonii strain AJ572 chromosome, complete genome | blastn | 128536 | 379 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 3679589 | 3679589 | PRJNA557895_P_NODE_29063_length_169_cov_1.366667_g28708_i0 | PRJNA557895 | 29063 | 169 | 1.366667 | 2.30966723 | Pantoea | 53335 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|2647079614|gb|CP141609.1| | 549 | g28708 | i0 | 100 | 650.568047337278 | 169 | 0 | 100 | 0 | 1 | 169 | 80857 | 80689 | Pantoea agglomerans strain BIM B-2003 chromosome, complete genome | blastn | 109946 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Pantoea | Pantoea agglomerans | ||
| 3679609 | 3679609 | PRJNA557895_P_NODE_3_length_23762_cov_8.051659_g2_i0 | PRJNA557895 | 3 | 23762 | 8.051659 | 1913.23521158 | root | 1 | Root_unresolved | Root_unresolved | 2290 | 0 | NTclustered | gi|1726022446|gb|CP042865.1| | 562 | g2 | i0 | 70.847 | 38.4852706001178 | 9896 | 2884 | 42 | 1 | 1 | 9895 | 3085337 | 3095232 | Escherichia coli strain ATCC BAA-196 chromosome, complete genome | blastn | 914487 | 2313 | 0.990056204063986 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4363447 | 4363447 | PRJNA557895_P_NODE_29604_length_167_cov_1.500000_g29249_i0 | PRJNA557895 | 29604 | 167 | 1.5 | 2.505 | uncultured Alphaproteobacteria bacterium | 91750 | Bacteria | Bacteria | 292 | 7.58e-75 | NTclustered | gi|451915059|gb|KC448923.1| | 91750 | g29249 | i0 | 98.204 | 96.8443113772455 | 167 | 3 | 100 | 0 | 1 | 167 | 84 | 250 | Uncultured alpha proteobacterium clone RLBp4071 16S ribosomal RNA gene, partial sequence | blastn | 16173 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | uncultured Alphaproteobacteria bacterium | |||||
| 4956455 | 4956455 | PRJNA557895_P_NODE_5524_length_384_cov_3.128358_g5169_i0 | PRJNA557895 | 5524 | 384 | 3.128358 | 12.01289472 | Burkholderiales | 80840 | Bacteria | Bacteria | 641 | 1.71e-179 | NTclustered | gi|1275594026|gb|CP024645.1| | 946333 | g5169 | i0 | 96.875 | 204.0859375 | 384 | 10 | 100 | 2 | 1 | 384 | 5690599 | 5690980 | Piscinibacter gummiphilus strain NBRC 109400 chromosome, complete genome | blastn | 78369 | 647 | 0.990726429675425 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Piscinibacter | Piscinibacter gummiphilus | ||
| 5639884 | 5639884 | PRJNA557895_P_NODE_25365_length_183_cov_3.044776_g25010_i0 | PRJNA557895 | 25365 | 183 | 3.044776 | 5.57194008 | Sphingomonas sp. MMS12-HWE2-04 | 3234199 | Bacteria | Bacteria | 303 | 3.9e-78 | NTclustered | gi|2851422138|gb|CP173254.1| | 3234199 | g25010 | i0 | 96.703 | 163.584699453552 | 182 | 6 | 99 | 0 | 2 | 183 | 107590 | 107409 | Sphingomonas sp. MMS12-HWE2-04 chromosome, complete genome | blastn | 29936 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. MMS12-HWE2-04 | ||
| 6232040 | 6232040 | PRJNA557895_P_NODE_39125_length_161_cov_0.910714_g38770_i0 | PRJNA557895 | 39125 | 161 | 0.910714 | 1.46624954 | Massilia | 149698 | Bacteria | Bacteria | 235 | 1.24e-57 | NTclustered | gi|1888689060|gb|CP050454.1| | 2709302 | g38770 | i0 | 93.125 | 69.1428571428571 | 160 | 11 | 99 | 0 | 2 | 161 | 1918526 | 1918367 | Massilia sp. Dwa41.01b chromosome, complete genome | blastn | 11132 | 235 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. Dwa41.01b | ||
| 6232041 | 6232041 | PRJNA557895_P_NODE_39365_length_158_cov_2.807339_g39010_i0 | PRJNA557895 | 39365 | 158 | 2.807339 | 4.43559562 | Burkholderiaceae | 119060 | Bacteria | Bacteria | 292 | 7.07e-75 | NTclustered | gi|532578729|gb|KC188318.1| | 305 | g39010 | i0 | 100 | 214.943037974684 | 158 | 0 | 100 | 0 | 1 | 158 | 1355 | 1198 | Ralstonia solanacearum strain CFBP 3059 23S ribosomal RNA gene, partial sequence | blastn | 33961 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 6913781 | 6913781 | PRJNA557895_P_NODE_15546_length_233_cov_1.157609_g15191_i0 | PRJNA557895 | 15546 | 233 | 1.157609 | 2.69722897 | Rodentibacter haemolyticus | 2778911 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|1931121878|gb|CP063056.1| | 2778911 | g15191 | i0 | 100 | 0.120171673819742 | 28 | 0 | 12 | 0 | 22 | 49 | 1881337 | 1881310 | Rodentibacter haemolyticus strain DSM 111151 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Rodentibacter | Rodentibacter haemolyticus | ||
| 7506376 | 7506376 | PRJNA557895_P_NODE_24306_length_188_cov_1.100719_g23951_i0 | PRJNA557895 | 24306 | 188 | 1.100719 | 2.06935172 | root | 1 | Root_unresolved | Root_unresolved | 348 | 1.84e-91 | NTclustered | gi|2285394367|gb|CP100204.1| | 337 | g23951 | i0 | 100 | 100 | 188 | 0 | 100 | 0 | 1 | 188 | 334913 | 335100 | Burkholderia glumae strain PW30RS chromosome 2, complete sequence | blastn | 18800 | 348 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia glumae | ||
| 7506419 | 7506419 | PRJNA557895_P_NODE_4986_length_409_cov_1.416667_g4632_i0 | PRJNA557895 | 4986 | 409 | 1.416667 | 5.79416803 | root | 1 | Root_unresolved | Root_unresolved | 756 | 0 | NTclustered | gi|114703507|emb|AM261760.1| | 287 | g4632 | i0 | 100 | 100 | 409 | 0 | 100 | 0 | 1 | 409 | 15738 | 16146 | IncP-1alpha plasmid pBS228, complete sequence | blastn | 40900 | 756 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 8188680 | 8188680 | PRJNA557895_P_NODE_13447_length_252_cov_1.630542_g13092_i0 | PRJNA557895 | 13447 | 252 | 1.630542 | 4.10896584 | Tepidimonas taiwanensis | 307486 | Bacteria | Bacteria | 449 | 6.94e-122 | NTclustered | gi|2102295900|gb|CP083911.1| | 307486 | g13092 | i0 | 98.81 | 213.563492063492 | 252 | 3 | 100 | 0 | 1 | 252 | 2755453 | 2755202 | Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome | blastn | 53818 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Tepidimonas | Tepidimonas taiwanensis | |||
| 8781211 | 8781211 | PRJNA557895_P_NODE_15507_length_233_cov_2.070652_g15152_i0 | PRJNA557895 | 15507 | 233 | 2.070652 | 4.82461916 | Burkholderiales | 80840 | Bacteria | Bacteria | 398 | 2.32e-106 | NTclustered | gi|2253630903|gb|CP098735.1| | 82541 | g15152 | i0 | 97.425 | 266.987124463519 | 233 | 6 | 100 | 0 | 1 | 233 | 1187684 | 1187916 | Cupriavidus gilardii strain QJ1 chromosome 1, complete sequence | blastn | 62208 | 398 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus gilardii | ||
| 8781254 | 8781254 | PRJNA557895_P_NODE_25627_length_182_cov_1.533835_g25272_i0 | PRJNA557895 | 25627 | 182 | 1.533835 | 2.7915797 | root | 1 | Root_unresolved | Root_unresolved | 337 | 3.82e-88 | NTclustered | gi|508311|gb|L27758.1|BIACOMGEN | 287 | g25272 | i0 | 100 | 100 | 182 | 0 | 100 | 0 | 1 | 182 | 16332 | 16151 | Pseudomonas aeruginosa plasmid Birmingham IncP-alpha, complete sequence | blastn | 18200 | 337 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 8781257 | 8781257 | PRJNA557895_P_NODE_26107_length_180_cov_2.335878_g25752_i0 | PRJNA557895 | 26107 | 180 | 2.335878 | 4.2045804 | root | 1 | Root_unresolved | Root_unresolved | 333 | 4.87e-87 | NTclustered | gi|1004607049|gb|KT865757.1| | 12917 | g25752 | i0 | 100 | 335.005555555556 | 180 | 0 | 100 | 0 | 1 | 180 | 1127 | 1306 | Acidovorax facilis strain DSM 649 23S ribosomal RNA gene, partial sequence | blastn | 60301 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax facilis | ||
| 9464910 | 9464910 | PRJNA557895_P_NODE_35848_length_163_cov_0.894737_g35493_i0 | PRJNA557895 | 35848 | 163 | 0.894737 | 1.45842131 | Paucibacter sp. KCTC 42545 | 1768242 | Bacteria | Bacteria | 137 | 3.65e-28 | NTclustered | gi|968572963|gb|CP013692.1| | 1768242 | g35493 | i0 | 88.496 | 15.0674846625767 | 113 | 13 | 69 | 0 | 4 | 116 | 4098312 | 4098200 | Paucibacter sp. KCTC 42545, complete genome | blastn | 2456 | 137 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Paucibacter sp. KCTC 42545 | ||
| 9465135 | 9465135 | PRJNA557895_P_NODE_8_length_12556_cov_9.870473_g6_i0 | PRJNA557895 | 8 | 12556 | 9.870473 | 1239.33658988 | Escherichia coli | 562 | Bacteria | Bacteria | 2054 | 0 | NTclustered | gi|2463294144|dbj|AP027408.1| | 562 | g6 | i0 | 77.183 | 9.95086014654349 | 3528 | 804 | 28 | 1 | 3915 | 7442 | 3027715 | 3031241 | Escherichia coli EC507 DNA, complete genome | blastn | 124943 | 2054 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 10739887 | 10739887 | PRJNA557895_P_NODE_12209_length_264_cov_1.251163_g11854_i0 | PRJNA557895 | 12209 | 264 | 1.251163 | 3.30307032 | Wolbachia endosymbiont of Chironomus riparius | 2883238 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2259295361|emb|OU906733.1| | 2883238 | g11854 | i0 | 100 | 0.113636363636364 | 30 | 0 | 11 | 0 | 122 | 151 | 798 | 827 | Wolbachia endosymbiont of Chironomus riparius isolate Wolbachia_endosymbiont_of_Chironomus_riparius genome assembly, chromosome: 1 | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Anaplasmataceae | Wolbachia | Wolbachia endosymbiont of Chironomus riparius | ||
| 10740200 | 10740200 | PRJNA557895_P_NODE_25409_length_183_cov_1.522388_g25054_i0 | PRJNA557895 | 25409 | 183 | 1.522388 | 2.78597004 | Serratia grimesii | 82995 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|1279326981|emb|LT883155.1| | 82995 | g25054 | i0 | 100 | 13.4644808743169 | 183 | 0 | 100 | 0 | 1 | 183 | 242683 | 242501 | Serratia grimesii isolate BXF1 genome assembly, chromosome: chr | blastn | 2464 | 339 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia grimesii | ||
| 10740679 | 10740679 | PRJNA557895_P_NODE_9789_length_290_cov_2.506224_g9434_i0 | PRJNA557895 | 9789 | 290 | 2.506224 | 7.2680496 | Cupriavidus basilensis | 68895 | Bacteria | Bacteria | 514 | 2.85e-141 | NTclustered | gi|752314807|gb|CP010536.1| | 68895 | g9434 | i0 | 98.621 | 219.11724137931 | 290 | 4 | 100 | 0 | 1 | 290 | 2145423 | 2145712 | Cupriavidus basilensis strain 4G11 chromosome main, complete sequence | blastn | 63544 | 514 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus basilensis | ||
| 11331506 | 11331506 | PRJNA557895_P_NODE_769_length_1310_cov_8.358446_g569_i0 | PRJNA557895 | 769 | 1310 | 8.358446 | 109.4956426 | root | 1 | Root_unresolved | Root_unresolved | 985 | 0 | NTclustered | gi|675820620|emb|LM997182.1| | 562 | g569 | i0 | 80.229 | 102 | 1310 | 259 | 100 | 0 | 1 | 1310 | 1730 | 421 | Escherichia coli genome assembly FHI97, scaffold scaffold-8_contig-38.0_1_3089_[organism:Escherichia | blastn | 133620 | 985 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12014845 | 12014845 | PRJNA557895_P_NODE_18870_length_213_cov_1.182927_g18515_i0 | PRJNA557895 | 18870 | 213 | 1.182927 | 2.51963451 | Burkholderia mallei | 13373 | Bacteria | Bacteria | 331 | 2.15e-86 | NTclustered | gi|773044643|gb|CP009943.1| | 13373 | g18515 | i0 | 94.836 | 206.920187793427 | 213 | 9 | 99 | 2 | 2 | 213 | 99501 | 99712 | Burkholderia mallei strain KC_1092 chromosome 2 sequence | blastn | 44074 | 331 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia mallei | ||
| 12015398 | 12015398 | PRJNA557895_P_NODE_630_length_1452_cov_6.746258_g463_i0 | PRJNA557895 | 630 | 1452 | 6.746258 | 97.95566616 | Escherichia coli | 562 | Bacteria | Bacteria | 1157 | 0 | NTclustered | gi|2584887709|gb|CP135077.1| | 562 | g463 | i0 | 81.303 | 0.983471074380165 | 1428 | 265 | 98 | 2 | 24 | 1450 | 3049014 | 3050440 | Escherichia coli strain 19213 chromosome, complete genome | blastn | 1428 | 1157 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12607255 | 12607255 | PRJNA557895_P_NODE_10870_length_278_cov_1.480349_g10515_i0 | PRJNA557895 | 10870 | 278 | 1.480349 | 4.11537022 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 409 | 1.32e-109 | NTclustered | gi|2797109174|gb|CP154874.1| | 43263 | g10515 | i0 | 93.455 | 422.60071942446 | 275 | 18 | 99 | 0 | 4 | 278 | 3991 | 3717 | Aquipseudomonas alcaligenes strain Med1 chromosome, complete genome | blastn | 117483 | 409 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas alcaligenes | ||
| 12607282 | 12607282 | PRJNA557895_P_NODE_19610_length_209_cov_1.593750_g19255_i0 | PRJNA557895 | 19610 | 209 | 1.59375 | 3.3309375 | root | 1 | Root_unresolved | Root_unresolved | 387 | 4.42e-103 | NTclustered | gi|1215054304|gb|KY000041.1| | 362 | g19255 | i0 | 100 | 102.842105263158 | 209 | 0 | 100 | 0 | 1 | 209 | 21672 | 21464 | Agrobacterium radiobacter strain CFBP296 plasmid pTi_CFBP296, complete sequence | blastn | 21494 | 387 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Agrobacterium | Agrobacterium radiobacter | ||
| 12607285 | 12607285 | PRJNA557895_P_NODE_19810_length_208_cov_4.062893_g19455_i0 | PRJNA557895 | 19810 | 208 | 4.062893 | 8.45081744 | Cupriavidus | 106589 | Bacteria | Bacteria | 383 | 5.69e-102 | NTclustered | gi|2253630903|gb|CP098735.1| | 82541 | g19455 | i0 | 100 | 227.899038461538 | 207 | 0 | 99 | 0 | 1 | 207 | 1187231 | 1187025 | Cupriavidus gilardii strain QJ1 chromosome 1, complete sequence | blastn | 47403 | 383 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus gilardii | ||
| 12607306 | 12607306 | PRJNA557895_P_NODE_26130_length_180_cov_1.824427_g25775_i0 | PRJNA557895 | 26130 | 180 | 1.824427 | 3.2839686 | Acinetobacter | 469 | Bacteria | Bacteria | 326 | 8.15e-85 | NTclustered | gi|1030108109|gb|CP015594.1| | 1608473 | g25775 | i0 | 99.441 | 665.622222222222 | 179 | 1 | 99 | 0 | 2 | 180 | 485768 | 485946 | Acinetobacter sp. NCu2D-2 chromosome, complete genome | blastn | 119812 | 326 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. NCu2D-2 | ||
| 13882313 | 13882313 | PRJNA557895_P_NODE_71_length_4097_cov_9.023715_g50_i0 | PRJNA557895 | 71 | 4097 | 9.023715 | 369.70160355 | root | 1 | Root_unresolved | Root_unresolved | 1892 | 0 | NTclustered | gi|1726022446|gb|CP042865.1| | 562 | g50 | i0 | 75.323 | 98.9101781791555 | 3947 | 973 | 96 | 1 | 102 | 4048 | 3116598 | 3120543 | Escherichia coli strain ATCC BAA-196 chromosome, complete genome | blastn | 405235 | 1903 | 0.994219653179191 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 14565008 | 14565008 | PRJNA557895_P_NODE_23532_length_191_cov_1.077465_g23177_i0 | PRJNA557895 | 23532 | 191 | 1.077465 | 2.05795815 | Candidatus Blochmannia vicinus (nom. nud.) | 251540 | Bacteria | Bacteria | 62.1 | 2.73e-5 | NTclustered | gi|2506093074|gb|CP125213.1| | 251540 | g23177 | i0 | 93.023 | 0.225130890052356 | 43 | 1 | 21 | 2 | 4 | 44 | 507938 | 507980 | MAG: Candidatus Blochmannia vicinus isolate RG_C_vicinus_PSW18456_S1 | blastn | 43 | 62.1 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Blochmanniella | Candidatus Blochmannia vicinus (nom. nud.) | |
| 14565247 | 14565247 | PRJNA557895_P_NODE_34032_length_164_cov_0.886957_g33677_i0 | PRJNA557895 | 34032 | 164 | 0.886957 | 1.45460948 | Ehrlichia muris | 35795 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|566059562|gb|CP006917.1| | 1423892 | g33677 | i0 | 100 | 0.530487804878049 | 29 | 0 | 18 | 0 | 114 | 142 | 1076624 | 1076652 | Ehrlichia muris AS145, complete genome | blastn | 87 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Anaplasmataceae | Ehrlichia | Ehrlichia muris | ||
| 14565275 | 14565275 | PRJNA557895_P_NODE_35412_length_163_cov_0.894737_g35057_i0 | PRJNA557895 | 35412 | 163 | 0.894737 | 1.45842131 | Sphingomonas parapaucimobilis | 28213 | Bacteria | Bacteria | 174 | 2.78e-39 | NTclustered | gi|2734897397|gb|CP155751.1| | 28213 | g35057 | i0 | 85.976 | 56.478527607362 | 164 | 21 | 100 | 2 | 1 | 163 | 117491 | 117329 | Sphingomonas parapaucimobilis strain YK209 plasmid unnamed3, complete sequence | blastn | 9206 | 174 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas parapaucimobilis | ||
| 15156315 | 15156315 | PRJNA557895_P_NODE_172_length_2594_cov_7.091945_g113_i0 | PRJNA557895 | 172 | 2594 | 7.091945 | 183.9650533 | root | 1 | Root_unresolved | Root_unresolved | 1581 | 0 | NTclustered | gi|1595648601|gb|CP029239.1| | 562 | g113 | i0 | 77.918 | 81.1191210485736 | 2536 | 560 | 98 | 0 | 13 | 2548 | 843119 | 845654 | Escherichia coli strain BH212 chromosome, complete genome | blastn | 210423 | 1581 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15156362 | 15156362 | PRJNA557895_P_NODE_32232_length_165_cov_3.517241_g31877_i0 | PRJNA557895 | 32232 | 165 | 3.517241 | 5.80344765 | Serratia | 613 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|1337385252|gb|CP014017.2| | 614 | g31877 | i0 | 100 | 100.115151515152 | 165 | 0 | 100 | 0 | 1 | 165 | 3585395 | 3585231 | Serratia liquefaciens strain FDAARGOS_125 chromosome, complete genome | blastn | 16519 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia liquefaciens | ||
| 17706239 | 17706239 | PRJNA557895_P_NODE_14_length_10401_cov_9.163157_g9_i0 | PRJNA557895 | 14 | 10401 | 9.163157 | 953.05995957 | root | 1 | Root_unresolved | Root_unresolved | 7142 | 0 | NTclustered | gi|2675987339|gb|OR902857.1| | 562 | g9 | i0 | 79.142 | 99.672339198154 | 10346 | 2149 | 99 | 9 | 57 | 10401 | 41567 | 31230 | Escherichia coli strain c44 plasmid unnamed, complete sequence | blastn | 1036692 | 7193 | 0.992909773390797 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18979679 | 18979679 | PRJNA557895_P_NODE_15795_length_231_cov_1.675824_g15440_i0 | PRJNA557895 | 15795 | 231 | 1.675824 | 3.87115344 | Asticcacaulis | 76890 | Bacteria | Bacteria | 427 | 2.9399999999999998e-115 | NTclustered | gi|1435235387|dbj|AP018827.1| | 78587 | g15440 | i0 | 100 | 177.753246753247 | 231 | 0 | 100 | 0 | 1 | 231 | 1588319 | 1588089 | Asticcacaulis excentricus M6 DNA, chromosome 1, complete geonome | blastn | 41061 | 427 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Asticcacaulis | Asticcacaulis excentricus | ||
| 20937889 | 20937889 | PRJNA557895_P_NODE_15057_length_237_cov_1.345745_g14702_i0 | PRJNA557895 | 15057 | 237 | 1.345745 | 3.18941565 | Photobacterium sp. CCB-ST2H9 | 2912855 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|2271415029|gb|CP100425.1| | 2912855 | g14702 | i0 | 100 | 0.118143459915612 | 28 | 0 | 12 | 0 | 172 | 199 | 2860014 | 2859987 | Photobacterium sp. CCB-ST2H9 chromosome 1, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Photobacterium | Photobacterium sp. CCB-ST2H9 | ||
| 20938132 | 20938132 | PRJNA557895_P_NODE_25717_length_182_cov_1.150376_g25362_i0 | PRJNA557895 | 25717 | 182 | 1.150376 | 2.09368432 | Candidatus Stammera capleta | 2608262 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1269271234|gb|CP024013.1| | 2608262 | g25362 | i0 | 100 | 0.159340659340659 | 29 | 0 | 16 | 0 | 145 | 173 | 41174 | 41146 | MAG: Candidatus Stammera capleta isolate NZ1215 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Stammera | Candidatus Stammera capleta | |
| 21530331 | 21530331 | PRJNA557895_P_NODE_17497_length_220_cov_1.742690_g17142_i0 | PRJNA557895 | 17497 | 220 | 1.74269 | 3.833918 | Acinetobacter | 469 | Bacteria | Bacteria | 396 | 7.809999999999997e-106 | NTclustered | gi|2456158263|gb|CP119200.1| | 40214 | g17142 | i0 | 99.091 | 653.522727272727 | 220 | 2 | 100 | 0 | 1 | 220 | 167866 | 167647 | Acinetobacter johnsonii strain AJ572 chromosome, complete genome | blastn | 143775 | 396 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 22212873 | 22212873 | PRJNA557895_P_NODE_15358_length_234_cov_2.200000_g15003_i0 | PRJNA557895 | 15358 | 234 | 2.2 | 5.148 | Tepidimonas taiwanensis | 307486 | Bacteria | Bacteria | 405 | 1.4e-108 | NTclustered | gi|2102295900|gb|CP083911.1| | 307486 | g15003 | i0 | 97.863 | 402.623931623932 | 234 | 5 | 100 | 0 | 1 | 234 | 2756445 | 2756212 | Tepidimonas taiwanensis strain LMG 22826 chromosome, complete genome | blastn | 94214 | 405 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Tepidimonas | Tepidimonas taiwanensis | |||
| 23488575 | 23488575 | PRJNA557895_P_NODE_29519_length_168_cov_0.857143_g29164_i0 | PRJNA557895 | 29519 | 168 | 0.857143 | 1.44000024 | uncultured Alphaproteobacteria bacterium | 91750 | Bacteria | Bacteria | 305 | 9.81e-79 | NTclustered | gi|146429289|gb|EF220105.1| | 91750 | g29164 | i0 | 99.405 | 100 | 168 | 1 | 100 | 0 | 1 | 168 | 42 | 209 | Uncultured alpha proteobacterium clone E03_ELL02 16S ribosomal RNA gene, partial sequence | blastn | 16800 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | uncultured Alphaproteobacteria bacterium | |||||
| 24080259 | 24080259 | PRJNA557895_P_NODE_28439_length_171_cov_5.245902_g28084_i0 | PRJNA557895 | 28439 | 171 | 5.245902 | 8.97049242 | Cupriavidus | 106589 | Bacteria | Bacteria | 316 | 4.6e-82 | NTclustered | gi|2253630903|gb|CP098735.1| | 82541 | g28084 | i0 | 100 | 224.157894736842 | 171 | 0 | 100 | 0 | 1 | 171 | 1189491 | 1189661 | Cupriavidus gilardii strain QJ1 chromosome 1, complete sequence | blastn | 38331 | 316 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus gilardii | ||
| 24762132 | 24762132 | PRJNA557895_P_NODE_19140_length_212_cov_0.938650_g18785_i0 | PRJNA557895 | 19140 | 212 | 0.93865 | 1.989938 | Blochmannia endosymbiont of Camponotus sp. | 700220 | Bacteria | Bacteria | 60.2 | 1.11e-4 | NTclustered | gi|2246427109|gb|CP097757.1| | 700220 | g18785 | i0 | 92.857 | 0.39622641509434 | 42 | 2 | 19 | 1 | 102 | 142 | 457719 | 457678 | Blochmannia endosymbiont of Camponotus sp. strain C-024 chromosome, complete genome | blastn | 84 | 60.2 | 1 | Bacteria | ant, tsetse, mealybug, aphid, etc. endosymbionts | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Candidatus Blochmanniella | Blochmannia endosymbiont of Camponotus sp. | |
| 25354573 | 25354573 | PRJNA557895_P_NODE_19460_length_210_cov_1.161491_g19105_i0 | PRJNA557895 | 19460 | 210 | 1.161491 | 2.4391311 | Arsenophonus | 637 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2842132073|emb|OZ195522.1| | 363258 | g19105 | i0 | 100 | 0.276190476190476 | 29 | 0 | 14 | 0 | 64 | 92 | 766625 | 766653 | Arsenophonus endosymbiont of Lipoptena cervi isolate a36fb20a-5ce7-4c9d-928d-b37a4c93de54 genome assembly, chromosome: 1 | blastn | 58 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Morganellaceae | Arsenophonus | Arsenophonus endosymbiont of Lipoptena cervi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;