RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA557895" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA557895 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2403765 2403765 PRJNA557895_P_NODE_35022_length_163_cov_1.938596_g34667_i0 PRJNA557895 35022 163 1.938596 3.15991148 Basidiomycota 5204 Fungi Fungi 302 1.22e-77   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g34667 i0 100 128 163 0 100 0 1 163 2817 2655 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 20864 302 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8189148 8189148 PRJNA557895_P_NODE_35467_length_163_cov_0.894737_g35112_i0 PRJNA557895 35467 163 0.894737 1.45842131 Malassezia globosa 76773 Fungi Fungi 291 2.64e-74   NTclustered gi|164659627|ref|XM_001730886.1| 425265 g35112 i0 98.773 1 163 2 100 0 1 163 358 196 Malassezia globosa CBS 7966 uncharacterized protein (MGL_1937), partial mRNA blastn 163 291 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
12607311 12607311 PRJNA557895_P_NODE_26670_length_178_cov_1.573643_g26315_i0 PRJNA557895 26670 178 1.573643 2.80108454 Agaricus 5340 Fungi Fungi 329 6.21e-86   NTclustered gi|597990156|ref|XM_007331940.1| 597362 g26315 i0 100 2 178 0 100 0 1 178 1411 1234 Agaricus bisporus var. burnettii JB137-S8 uncharacterized protein (AGABI1DRAFT_115279), mRNA blastn 356 329 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Agaricaceae Agaricus Agaricus bisporus
15838867 15838867 PRJNA557895_P_NODE_26873_length_177_cov_4.429688_g26518_i0 PRJNA557895 26873 177 4.429688 7.84054776 Thanatephorus cucumeris 107832 Fungi Fungi 255 1.06e-63   NTclustered gi|91983816|gb|DQ369860.1| 107832 g26518 i0 92.655 105.022598870056 177 13 100 0 1 177 457 633 Thanatephorus cucumeris clone GS2Rsol large subunit ribosomal RNA, partial sequence; mitochondrial blastn 18589 255 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Thanatephorus Thanatephorus cucumeris
24762302 24762302 PRJNA557895_P_NODE_260_length_2199_cov_37.107442_g49_i18 PRJNA557895 260 2199 37.107442 815.99264958 Coltricia macropora 1571648 Fungi Fungi 154 6.059999999999999e-32   NTclustered gi|721633476|gb|KJ000221.1| 1571648 g49 i18 84.177 7.21509777171442 158 25 7 0 270 427 218 375 Coltricia macropora voucher Cui 9039 28S ribosomal RNA gene, partial sequence blastn 15866 154 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Coltricia Coltricia macropora
24762642 24762642 PRJNA557895_P_NODE_460_length_1709_cov_33.318072_g49_i25 PRJNA557895 460 1709 33.318072 569.40585048 Coltricia macropora 1571648 Fungi Fungi 154 4.69e-32   NTclustered gi|721633476|gb|KJ000221.1| 1571648 g49 i25 84.177 9.2837916910474 158 25 9 0 270 427 218 375 Coltricia macropora voucher Cui 9039 28S ribosomal RNA gene, partial sequence blastn 15866 154 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Coltricia Coltricia macropora
25354613 25354613 PRJNA557895_P_NODE_30380_length_167_cov_0.864407_g30025_i0 PRJNA557895 30380 167 0.864407 1.44355969 Opisthokonta 33154 Fungi Fungi 309 7.53e-80   NTclustered gi|915512607|gb|KP825390.1| 76775 g30025 i0 100 100 167 0 100 0 1 167 456 290 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 16700 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;