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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA557436" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA557436 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1128237 1128237 PRJNA557436_S_NODE_1861_length_273_cov_2.121849_g1813_i0 PRJNA557436 1861 273 2.121849 5.79264777 Opisthokonta 33154 Fungi Fungi 505 1.6e-138   NTclustered gi|915512607|gb|KP825390.1| 76775 g1813 i0 100 100.267399267399 273 0 100 0 1 273 506 234 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 27373 505 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7506311 7506311 PRJNA557436_S_NODE_1026_length_356_cov_3.700935_g978_i0 PRJNA557436 1026 356 3.700935 13.1753286 Ustilago 5269 Fungi Fungi 599 9.599999999999997e-167   NTclustered gi|1828307496|gb|MT279744.1| 249490 g978 i0 99.394 91.6404494382023 330 2 93 0 1 330 626 297 Ustilago sparsa isolate 2Y82 large subunit ribosomal RNA gene, partial sequence blastn 32624 599 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Ustilago Ustilago sparsa
7506327 7506327 PRJNA557436_S_NODE_7266_length_162_cov_2.078740_g7218_i0 PRJNA557436 7266 162 2.07874 3.3675588 Ustilaginaceae 5268 Fungi Fungi 274 2.64e-69   NTclustered gi|51860196|gb|AF009881.2| 63396 g7218 i0 100 90.0493827160494 148 0 91 0 15 162 58 205 Ustilago cynodontis large subunit ribosomal RNA gene, partial sequence blastn 14588 274 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Ustilago Ustilago cynodontis
8188589 8188589 PRJNA557436_S_NODE_5747_length_175_cov_1.928571_g5699_i0 PRJNA557436 5747 175 1.928571 3.37499925 Lentinula edodes 5353 Fungi Fungi 52.8 0.015   NTclustered gi|2185503315|ref|XM_046224946.1| 5353 g5699 i0 100 0.16 28 0 16 0 39 66 2428 2455 Lentinula edodes uncharacterized protein (C8R40DRAFT_1054715), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
10056818 10056818 PRJNA557436_S_NODE_6988_length_164_cov_2.310078_g6940_i0 PRJNA557436 6988 164 2.310078 3.78852792 Fungi 4751 Fungi Fungi 303 3.42e-78   NTclustered gi|5232|emb|X62396.1| 5270 g6940 i0 100 100 164 0 100 0 1 164 743 906 U.maydis gene for small subunit ribosomal RNA blastn 16400 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
13882199 13882199 PRJNA557436_S_NODE_6971_length_164_cov_3.782946_g6923_i0 PRJNA557436 6971 164 3.782946 6.20403144 Malassezia 55193 Fungi Fungi 303 3.42e-78   NTclustered gi|953821272|gb|KT310070.1| 76773 g6923 i0 100 99.6158536585366 164 0 100 0 1 164 832 669 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 16337 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
17113438 17113438 PRJNA557436_S_NODE_1974_length_266_cov_2.095238_g1926_i0 PRJNA557436 1974 266 2.095238 5.57333308 Malassezia restricta 76775 Fungi Fungi 492 1.2099999999999999e-134   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g1926 i0 100 84.8308270676692 266 0 100 0 1 266 1543 1808 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 22565 492 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20254800 20254800 PRJNA557436_S_NODE_996_length_361_cov_2.475460_g948_i0 PRJNA557436 996 361 2.47546 8.9364106 Ustilaginaceae 5268 Fungi Fungi 662 0   NTclustered gi|1358186638|gb|MH047195.1| 5270 g948 i0 99.723 98.5429362880886 361 1 100 0 1 361 4780 4420 Mycosarcoma maydis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 35574 662 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
22805443 22805443 PRJNA557436_S_NODE_1858_length_273_cov_3.575630_g1810_i0 PRJNA557436 1858 273 3.57563 9.7614699 Eukaryota 2759 Fungi Fungi 501 2.07e-137   NTclustered gi|315360799|gb|HQ108161.1| 175244 g1810 i0 100 98.9047619047619 271 0 99 0 3 273 1 271 Uncultured Basidiomycota clone Gi_gi_3 28S ribosomal RNA gene, partial sequence blastn 27001 505 0.992079207920792 Eukaryota Opisthokonta Fungi Basidiomycota         uncultured Basidiomycota
24080178 24080178 PRJNA557436_S_NODE_2879_length_226_cov_2.293194_g2831_i0 PRJNA557436 2879 226 2.293194 5.18261844 Basidiomycota 5204 Fungi Fungi 363 8.179999999999999e-96   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2831 i0 95.964 143.933628318584 223 9 99 0 4 226 1540 1318 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 32529 363 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;